| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is coaX
Identifier: 99080603
GI number: 99080603
Start: 818036
End: 818818
Strand: Direct
Name: coaX
Synonym: TM1040_0762
Alternate gene names: 99080603
Gene position: 818036-818818 (Clockwise)
Preceding gene: 99080602
Following gene: 99080604
Centisome position: 25.56
GC content: 58.88
Gene sequence:
>783_bases ATGCTTCTCGCGGTTGATTGCGGCAATACTAACACGGTTTTTGCGCTCTGGGATGGCGATCAGATGATCGGCCACTGGCG CACGTCGACCGAATGGCAGCGCACGGCGGATCAGTATTATGTCTGGCTCTCCACCTTGATGAACCTGCAGGGCATCAAGG CTCAGATCACGGATATGATTATCTCGTCGACCGTGCCGCGTGTCGTGTTCAACCTGCGCGTTCTGTCGGACCGCTACTTC AACACCCGCCCGCTGGTGGTGGGTAAACCCGAATGCGCGCTTCCGGTGGATGTGCGCGTCGACGAAGGTACCACCGTCGG CCCGGACCGGCTGGTCAATACGGTGGCGGGGTATGAAAAATATGGCGGTGATCTGATCGTCGTCGATTTTGGAACCGCAA CTACATTCGATGTGGTGGCCGCCGACGGCGCCTATGTGGGCGGAGTCATCGCGCCGGGGGTGAACCTCAGCCTGGAGGCG TTGCACCATGCCGCCGCCGCGCTGCCACACGTCGACATTTCGAAACCACAGAATGTCATCGGCACCAACACGGTGGCCTG CATGCAGTCTGGCGTCTTCTGGGGCTATGTCGGCCTCGTGCGCGAGATCTGCGATCGCATCAAGGCCGAATCCGGTGTGC CGATGAAAGTCATATCAACCGGCGGGCTGGCGCCGCTCTTCCAGCAGACAGCAGATCTATTTGACGCATATGAGGATGAC CTGACCATGCAAGGTCTGAGGCGCATCCACGAGCATAACAAGGATATCGGTAATCACGCATGA
Upstream 100 bases:
>100_bases TTGAAACCATCGACGACGCGGGCAACCTCGTTCTCAAGACCGCAAAGGGGATCGTCACCATCCCCGCAGCGGACATCTTT TTCTGACGGAGGCGGGGTAT
Downstream 100 bases:
>100_bases GCAGTGAAAGACTAATCTATTTGCCCCTCGGCGGGGCAGGCGAAATCGGCATGAACGCCTACGTCTACGGCTATGGTGCG CCGGGCAAGGAACGGCTGAT
Product: pantothenate kinase
Products: NA
Alternate protein names: PanK-III; Pantothenic acid kinase
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MLLAVDCGNTNTVFALWDGDQMIGHWRTSTEWQRTADQYYVWLSTLMNLQGIKAQITDMIISSTVPRVVFNLRVLSDRYF NTRPLVVGKPECALPVDVRVDEGTTVGPDRLVNTVAGYEKYGGDLIVVDFGTATTFDVVAADGAYVGGVIAPGVNLSLEA LHHAAAALPHVDISKPQNVIGTNTVACMQSGVFWGYVGLVREICDRIKAESGVPMKVISTGGLAPLFQQTADLFDAYEDD LTMQGLRRIHEHNKDIGNHA
Sequences:
>Translated_260_residues MLLAVDCGNTNTVFALWDGDQMIGHWRTSTEWQRTADQYYVWLSTLMNLQGIKAQITDMIISSTVPRVVFNLRVLSDRYF NTRPLVVGKPECALPVDVRVDEGTTVGPDRLVNTVAGYEKYGGDLIVVDFGTATTFDVVAADGAYVGGVIAPGVNLSLEA LHHAAAALPHVDISKPQNVIGTNTVACMQSGVFWGYVGLVREICDRIKAESGVPMKVISTGGLAPLFQQTADLFDAYEDD LTMQGLRRIHEHNKDIGNHA >Mature_260_residues MLLAVDCGNTNTVFALWDGDQMIGHWRTSTEWQRTADQYYVWLSTLMNLQGIKAQITDMIISSTVPRVVFNLRVLSDRYF NTRPLVVGKPECALPVDVRVDEGTTVGPDRLVNTVAGYEKYGGDLIVVDFGTATTFDVVAADGAYVGGVIAPGVNLSLEA LHHAAAALPHVDISKPQNVIGTNTVACMQSGVFWGYVGLVREICDRIKAESGVPMKVISTGGLAPLFQQTADLFDAYEDD LTMQGLRRIHEHNKDIGNHA
Specific function: Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
COG id: COG1521
COG function: function code K; Putative transcriptional regulator, homolog of Bvg accessory factor
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type III pantothenate kinase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): COAX_SILST (Q1GIM1)
Other databases:
- EMBL: CP000377 - RefSeq: YP_612757.1 - ProteinModelPortal: Q1GIM1 - SMR: Q1GIM1 - STRING: Q1GIM1 - GeneID: 4076171 - GenomeReviews: CP000377_GR - KEGG: sit:TM1040_0762 - NMPDR: fig|292414.1.peg.2865 - eggNOG: COG1521 - HOGENOM: HBG634537 - OMA: PAIVVDF - ProtClustDB: PRK13318 - BioCyc: SSP292414:TM1040_0762-MONOMER - GO: GO:0005737 - HAMAP: MF_01274 - InterPro: IPR004619 - TIGRFAMs: TIGR00671
Pfam domain/function: PF03309 Bvg_acc_factor
EC number: =2.7.1.33
Molecular weight: Translated: 28340; Mature: 28340
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: ACT_SITE 109-109 BINDING 132-132 BINDING 184-184
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLAVDCGNTNTVFALWDGDQMIGHWRTSTEWQRTADQYYVWLSTLMNLQGIKAQITDMI CEEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ISSTVPRVVFNLRVLSDRYFNTRPLVVGKPECALPVDVRVDEGTTVGPDRLVNTVAGYEK HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH YGGDLIVVDFGTATTFDVVAADGAYVGGVIAPGVNLSLEALHHAAAALPHVDISKPQNVI HCCCEEEEECCCCCEEEEEECCCCEECCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCC GTNTVACMQSGVFWGYVGLVREICDRIKAESGVPMKVISTGGLAPLFQQTADLFDAYEDD CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC LTMQGLRRIHEHNKDIGNHA HHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLLAVDCGNTNTVFALWDGDQMIGHWRTSTEWQRTADQYYVWLSTLMNLQGIKAQITDMI CEEEEECCCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ISSTVPRVVFNLRVLSDRYFNTRPLVVGKPECALPVDVRVDEGTTVGPDRLVNTVAGYEK HHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHH YGGDLIVVDFGTATTFDVVAADGAYVGGVIAPGVNLSLEALHHAAAALPHVDISKPQNVI HCCCEEEEECCCCCEEEEEECCCCEECCEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCC GTNTVACMQSGVFWGYVGLVREICDRIKAESGVPMKVISTGGLAPLFQQTADLFDAYEDD CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC LTMQGLRRIHEHNKDIGNHA HHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA