| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is hipO [H]
Identifier: 99080560
GI number: 99080560
Start: 776435
End: 777598
Strand: Direct
Name: hipO [H]
Synonym: TM1040_0719
Alternate gene names: 99080560
Gene position: 776435-777598 (Clockwise)
Preceding gene: 99080559
Following gene: 99080566
Centisome position: 24.26
GC content: 59.97
Gene sequence:
>1164_bases ATGCCCGTCAAGAACCGCTTTGCTGAGTTGCTGCCCGAAATTACTGCGTGGCGACGTGACCTGCACGAAAACCCCGAAAT CCTGTTCGAAACCCATCGCACCAGCGCGCTGGTGGAGGAGAAACTCAAGGCGTTCGGCTGCGACGAAGTGGTCACGGGCA TTGGCCGCACCGGCGTTGTGGGCGTCATCAAGGGTAAATCCTCCGCATCAGGCAAGGTCATCGGTCTGCGGGCCGATATG GACGCGCTGCCGATCCATGAAGAAACCGGGCTGGAGTATGCCTCCAAGACCGCAAACGCCATGCACGCCTGTGGTCATGA CGGTCATACCGCCATGCTTTTGGGCGCGGCGAAATATCTCTCCGAGACGCGGAACTTCGACGGCACCGTTGTGGTGATCT TTCAGCCTGCCGAAGAAGGCGGCGGCGGCGGCAAGGAAATGTGCGATGATGGCATGATGGAGCGCTGGGGCATCCAGGAA GTCTATGGCATGCACAATTGGCCGGGTCGCCCGGTTGGAAGCTTTGCAATCCGTTCGGGTGCCTTCTTTGCGGCGACCGA TCAGTTCGACATCACCTTTACCGGCAAAGGCGGCCATGCCGCTAAGCCGCAGGAAACCATCGATTCGACCGTGATGGCAT CGCAGGCGGTGCTTGCCCTGCAAACCATCGCTGCCCGCAACGCCGATCCCGTGCATCAGATCGTGGTCTCTGTGACCTCT TTTGAGACCTCCTCCAAGGCGTTCAACGTGATTCCTGAGCGCGTTCAGATCAAAGGCACCGTGCGCACCATGGCGCCCGA GATGCGGGATCTTGCTGAAAAACGTATCAAGGAAATCTGCGCGGGCATCGCAGCGACCTTTGGCGGTGAAGCCGATGTGA CTTACCACCGTGGCTATCCGGTGATGGTGAACCATGACGAGCAGACCGAGTTTGCCGCCAAAGTGGCGCGTGACATTTCC GGGCAGTGCGATGAGGCGCCGCTGGTGATGGGGGGCGAAGACTTTGCCTTCATGCTCGAAGAGCGTCCCGGTGCCTATAT TCTCGTCGGCAATGGGGACACCGCCGCCGTGCATCACCCCAAGTATAACTTCACCGATGATGCGATTCCCGCAGGCTGCA GCTGGTGGGCGGAGATCGTCGAGCAGCGCATGCCCGCAGCCTGA
Upstream 100 bases:
>100_bases TGCCCGCCAGCTCATCATAAGGGCGCTGCGTTGCAGCCCCTGTGCACCCGGCCGCTCCCCGTGCCGGGTGTGACCATCCG AAAGACAAGGAGAAAGACCT
Downstream 100 bases:
>100_bases TCCGTATCATCAAAGTGAAGAAGGGGGCCACTTCGGCCCCCTTTTTTGTGCAACCGCTTGGGCTTTTGTCTCACCTTCCC AGCTGCACTCTCGTAAGGAT
Product: peptidase M20D, amidohydrolase
Products: NA
Alternate protein names: Benzoylglycine amidohydrolase; Hippuricase [H]
Number of amino acids: Translated: 387; Mature: 386
Protein sequence:
>387_residues MPVKNRFAELLPEITAWRRDLHENPEILFETHRTSALVEEKLKAFGCDEVVTGIGRTGVVGVIKGKSSASGKVIGLRADM DALPIHEETGLEYASKTANAMHACGHDGHTAMLLGAAKYLSETRNFDGTVVVIFQPAEEGGGGGKEMCDDGMMERWGIQE VYGMHNWPGRPVGSFAIRSGAFFAATDQFDITFTGKGGHAAKPQETIDSTVMASQAVLALQTIAARNADPVHQIVVSVTS FETSSKAFNVIPERVQIKGTVRTMAPEMRDLAEKRIKEICAGIAATFGGEADVTYHRGYPVMVNHDEQTEFAAKVARDIS GQCDEAPLVMGGEDFAFMLEERPGAYILVGNGDTAAVHHPKYNFTDDAIPAGCSWWAEIVEQRMPAA
Sequences:
>Translated_387_residues MPVKNRFAELLPEITAWRRDLHENPEILFETHRTSALVEEKLKAFGCDEVVTGIGRTGVVGVIKGKSSASGKVIGLRADM DALPIHEETGLEYASKTANAMHACGHDGHTAMLLGAAKYLSETRNFDGTVVVIFQPAEEGGGGGKEMCDDGMMERWGIQE VYGMHNWPGRPVGSFAIRSGAFFAATDQFDITFTGKGGHAAKPQETIDSTVMASQAVLALQTIAARNADPVHQIVVSVTS FETSSKAFNVIPERVQIKGTVRTMAPEMRDLAEKRIKEICAGIAATFGGEADVTYHRGYPVMVNHDEQTEFAAKVARDIS GQCDEAPLVMGGEDFAFMLEERPGAYILVGNGDTAAVHHPKYNFTDDAIPAGCSWWAEIVEQRMPAA >Mature_386_residues PVKNRFAELLPEITAWRRDLHENPEILFETHRTSALVEEKLKAFGCDEVVTGIGRTGVVGVIKGKSSASGKVIGLRADMD ALPIHEETGLEYASKTANAMHACGHDGHTAMLLGAAKYLSETRNFDGTVVVIFQPAEEGGGGGKEMCDDGMMERWGIQEV YGMHNWPGRPVGSFAIRSGAFFAATDQFDITFTGKGGHAAKPQETIDSTVMASQAVLALQTIAARNADPVHQIVVSVTSF ETSSKAFNVIPERVQIKGTVRTMAPEMRDLAEKRIKEICAGIAATFGGEADVTYHRGYPVMVNHDEQTEFAAKVARDISG QCDEAPLVMGGEDFAFMLEERPGAYILVGNGDTAAVHHPKYNFTDDAIPAGCSWWAEIVEQRMPAA
Specific function: Required But Not Essential For Aminobenzoyl-Glutamate Utilization. May Participate In Hydrolysis Of Aminobenzoyl- Glutamate To Aminobenzoate, Either Alone Or In Combination With Abgb. [C]
COG id: COG1473
COG function: function code R; Metal-dependent amidase/aminoacylase/carboxypeptidase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M20 family [H]
Homologues:
Organism=Escherichia coli, GI87081880, Length=425, Percent_Identity=27.5294117647059, Blast_Score=100, Evalue=1e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017439 - InterPro: IPR010168 - InterPro: IPR002933 - InterPro: IPR011650 [H]
Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]
EC number: =3.5.1.32 [H]
Molecular weight: Translated: 41847; Mature: 41716
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKNRFAELLPEITAWRRDLHENPEILFETHRTSALVEEKLKAFGCDEVVTGIGRTGVV CCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCCEE GVIKGKSSASGKVIGLRADMDALPIHEETGLEYASKTANAMHACGHDGHTAMLLGAAKYL EEEECCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SETRNFDGTVVVIFQPAEEGGGGGKEMCDDGMMERWGIQEVYGMHNWPGRPVGSFAIRSG HHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEECC AFFAATDQFDITFTGKGGHAAKPQETIDSTVMASQAVLALQTIAARNADPVHQIVVSVTS EEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FETSSKAFNVIPERVQIKGTVRTMAPEMRDLAEKRIKEICAGIAATFGGEADVTYHRGYP CCCCCHHHHCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC VMVNHDEQTEFAAKVARDISGQCDEAPLVMGGEDFAFMLEERPGAYILVGNGDTAAVHHP EEECCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCEEEEEECCCEEEEECC KYNFTDDAIPAGCSWWAEIVEQRMPAA CCCCCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure PVKNRFAELLPEITAWRRDLHENPEILFETHRTSALVEEKLKAFGCDEVVTGIGRTGVV CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHCCCCCCEE GVIKGKSSASGKVIGLRADMDALPIHEETGLEYASKTANAMHACGHDGHTAMLLGAAKYL EEEECCCCCCCCEEEEECCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHH SETRNFDGTVVVIFQPAEEGGGGGKEMCDDGMMERWGIQEVYGMHNWPGRPVGSFAIRSG HHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCEEECC AFFAATDQFDITFTGKGGHAAKPQETIDSTVMASQAVLALQTIAARNADPVHQIVVSVTS EEEEECCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH FETSSKAFNVIPERVQIKGTVRTMAPEMRDLAEKRIKEICAGIAATFGGEADVTYHRGYP CCCCCHHHHCCCCCEEEEEHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCC VMVNHDEQTEFAAKVARDISGQCDEAPLVMGGEDFAFMLEERPGAYILVGNGDTAAVHHP EEECCCHHHHHHHHHHHHHCCCCCCCCEEECCCCEEEEEECCCCEEEEEECCCEEEEECC KYNFTDDAIPAGCSWWAEIVEQRMPAA CCCCCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7730270; 10688204 [H]