Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080566

Identifier: 99080566

GI number: 99080566

Start: 782613

End: 783122

Strand: Direct

Name: 99080566

Synonym: TM1040_0725

Alternate gene names: NA

Gene position: 782613-783122 (Clockwise)

Preceding gene: 99080560

Following gene: 99080570

Centisome position: 24.45

GC content: 63.73

Gene sequence:

>510_bases
GTGCATCTGAGTTCTCAGGTTTTGCAGGGCTCTGGCTCCGGCGTTCGGATCGAACCGGCGCGGCCGGTTTCGCCCGATGC
ACCGCCAGAGGTCGAGACGCAGGAGTTGACGACTTCGGGCGGGACATGGACCTCTCCGTCGGATCGTCAGGAGGTCACAA
CAGCGGCGCTTGATACGCAGCCCGTTCGGGAGGTCGCGCCGCAACCTGTTGCGCCGACGCAAAGCAGCACGCCTGCACCG
GTTGTGGCTTCGGAACAGTCCTTTGTCGGGCAGAAAACCACCGTTGCAGGTCTGGGCGATCCCGGGCGTGACGGGCTTTG
GATGGAAACGCCACTGGTGTCCTCGCGGCGCAACGCGCGCCTGACTGCGCCGAATGGTAAATCCGTAGTGGTGACGCTGG
AACCAATTTCTGGCTCTGCGGGCCAGGGCAGCCGCCTTTCAATTGATGGTATGCGCGCGCTGGGCTTGCCGCTCACTGAG
CTTGTTGAATTGCGGGTGGGCCCGGTCTAG

Upstream 100 bases:

>100_bases
GTCGGGCTAGGGTCTCGCCATGACAAGACGTGCATTCAAATATCTGACCCTTGCCGCGCTGGCTGCCGGTGGTGTTTCCG
CGTGCAACGCTCTGGGCGGT

Downstream 100 bases:

>100_bases
CACCGCGCCGCCCGGCTCGTGATTTGTTATTTCAGGTATTTCGCGGCTTCTTTGCGGGCAAAGGCTTTCATGCTTTCGCC
ATGCTCGGCCAAGAAAGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MHLSSQVLQGSGSGVRIEPARPVSPDAPPEVETQELTTSGGTWTSPSDRQEVTTAALDTQPVREVAPQPVAPTQSSTPAP
VVASEQSFVGQKTTVAGLGDPGRDGLWMETPLVSSRRNARLTAPNGKSVVVTLEPISGSAGQGSRLSIDGMRALGLPLTE
LVELRVGPV

Sequences:

>Translated_169_residues
MHLSSQVLQGSGSGVRIEPARPVSPDAPPEVETQELTTSGGTWTSPSDRQEVTTAALDTQPVREVAPQPVAPTQSSTPAP
VVASEQSFVGQKTTVAGLGDPGRDGLWMETPLVSSRRNARLTAPNGKSVVVTLEPISGSAGQGSRLSIDGMRALGLPLTE
LVELRVGPV
>Mature_169_residues
MHLSSQVLQGSGSGVRIEPARPVSPDAPPEVETQELTTSGGTWTSPSDRQEVTTAALDTQPVREVAPQPVAPTQSSTPAP
VVASEQSFVGQKTTVAGLGDPGRDGLWMETPLVSSRRNARLTAPNGKSVVVTLEPISGSAGQGSRLSIDGMRALGLPLTE
LVELRVGPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17498; Mature: 17498

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHLSSQVLQGSGSGVRIEPARPVSPDAPPEVETQELTTSGGTWTSPSDRQEVTTAALDTQ
CCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCC
PVREVAPQPVAPTQSSTPAPVVASEQSFVGQKTTVAGLGDPGRDGLWMETPLVSSRRNAR
CHHHHCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCE
LTAPNGKSVVVTLEPISGSAGQGSRLSIDGMRALGLPLTELVELRVGPV
EECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCC
>Mature Secondary Structure
MHLSSQVLQGSGSGVRIEPARPVSPDAPPEVETQELTTSGGTWTSPSDRQEVTTAALDTQ
CCCCCCHHHCCCCCEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHHHHHCCCC
PVREVAPQPVAPTQSSTPAPVVASEQSFVGQKTTVAGLGDPGRDGLWMETPLVSSRRNAR
CHHHHCCCCCCCCCCCCCCCEEECCHHHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCE
LTAPNGKSVVVTLEPISGSAGQGSRLSIDGMRALGLPLTELVELRVGPV
EECCCCCEEEEEEECCCCCCCCCCEEEECCCCCCCCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA