Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080518

Identifier: 99080518

GI number: 99080518

Start: 723729

End: 724040

Strand: Reverse

Name: 99080518

Synonym: TM1040_0677

Alternate gene names: NA

Gene position: 724040-723729 (Counterclockwise)

Preceding gene: 99080521

Following gene: 99080517

Centisome position: 22.62

GC content: 64.74

Gene sequence:

>312_bases
GTGTACCGCCTGACCCTCGCCGCCTGCCTCTGCCTGTCCACAACGCTTGTTTTTGCGCCCTCGGCGCAGGCCGGCACGAT
CGAACGCGCCTGTCGCAACTCCGACCGCCAGGCCGCAGAGCCCACGATCTGCCGCTGCATCCAGAAAGTCGCAGAACGTC
GGCTCACCAAATCCGAGCAGCGCACCGTCGCCAAGTGGTTTGCAGACCCCCACCGCGCTCAGGAAGTGCGCCAATCCGAC
CGGCGCAGCGATGCCCGCCTGTGGGAACGTTACAAACTCTTTGGTACGGACGCCGAACGCATCTGCGGATAA

Upstream 100 bases:

>100_bases
CCAAAGGCCGCTGCAAGCCCATTGAAACGCCCTGTTCAGATGTGGAATAGTTGGTCAAATTTTTAGAGAGTTTCACCGTG
CCAACCGGAGAAAGATCATC

Downstream 100 bases:

>100_bases
ACGCGCCGACCCCACCTCAGAAACTCTGTTAAAAAATGGTTAATCCGCGCTGCAATTAACCATTTTTTCTTTCAAAAAGG
CAAAACTCACCGCCTCGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQRTVAKWFADPHRAQEVRQSD
RRSDARLWERYKLFGTDAERICG

Sequences:

>Translated_103_residues
MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQRTVAKWFADPHRAQEVRQSD
RRSDARLWERYKLFGTDAERICG
>Mature_103_residues
MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQRTVAKWFADPHRAQEVRQSD
RRSDARLWERYKLFGTDAERICG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11807; Mature: 11807

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQ
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTVAKWFADPHRAQEVRQSDRRSDARLWERYKLFGTDAERICG
HHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MYRLTLAACLCLSTTLVFAPSAQAGTIERACRNSDRQAAEPTICRCIQKVAERRLTKSEQ
CCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
RTVAKWFADPHRAQEVRQSDRRSDARLWERYKLFGTDAERICG
HHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA