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The map label for this gene is oxyR [C]

Identifier: 99080517

GI number: 99080517

Start: 722497

End: 723462

Strand: Reverse

Name: oxyR [C]

Synonym: TM1040_0676

Alternate gene names: 99080517

Gene position: 723462-722497 (Counterclockwise)

Preceding gene: 99080518

Following gene: 99080515

Centisome position: 22.6

GC content: 58.9

Gene sequence:

>966_bases
ATGCTTATGAAAGGCGTCACGCTCAGAGGGCTTGAAGTTTTTGAAGCTTTGGCCAAATCGGGTTCTGTCGCGCAGGCTGC
AGATATTACCGGACTCAGCCAGCCCGCCGTGAGTCAGCAACTTCGAAATCTCGAAAAGGCGCTTGGATCGGATCTGGTCG
ATCATGGACGGCGCCCAATGGTGCTGACCTCTGCCGGACGCAGCTTTCTGTCGCGCACCCAAGCGATCCTGAGCGAGCTG
CGCCTCGCCCAAAGCGAACTCACCGTGATGGATCTGTCACATTTGCCGGCGCTGTCGATTGGGTTGATTGACGATTTTGA
CAATGACCTGACACCGCGCCTTGCGACCATTCTGGCGGACAGTCTCACGCAGTGCCGTTTCAAGATGGTCACAGCCTCCA
GCCATGACATCCATAGAGCCATGGCTGAAAAGGATCTGCACATCGGCGTTGCGGCATCAACCGGCGAACTTCGCACAGGT
GTGACCGAATATCCGCTGGTGGAAGAGCCCTTTATCCTGGTGGCCCCGCGGGGCTGCATAACCGATCCCGACGATGTCGG
GAACCAGCTCAATCACCTGCCGCTGCTGCGCTACGCGCGGGATCAGCTGATCTCGCAGCAGATCGAGTCGCATCTCAGCC
GCAACAAGATGGAATTTGACGACCGTTTCGAGATCGGCTCACATCTTGCGCTGATGGCCATGGTGGCACGCCGGATCGGT
TGGGCCATTACGACTCCGCTGGGCTACATGCGGGCCGTGCGCTTCCATGAGGACATCGACGCATACGCGCTCCCATTTGC
CGGGTTCTCGCGTCGCATTTCACTCTTTGCACAGTCCGATTGGCCGGACACTGTCCCGCTTGAGGTGGCAGGCACGGTGC
GTCGACTGACCCAGAGCCAGATGATCACCCCAGCCATCAACCGCCTGCCTTGGCTTGCCGGACAACTGCGCGTCATCGAA
GAGTGA

Upstream 100 bases:

>100_bases
TACGCAGGGAAATCCTGTGCTGTTCAGTGTTCAGACGCTCCCCCGGCAGAAGCATCGCGTGACGGAGTTTGAAATTAATA
GGACTTTTGGGAGCTAACCT

Downstream 100 bases:

>100_bases
TCCTCGCGCCTGGGCGCGTCACCCGCGCCCAGACTGCGATTTCCCGCATACGACATGGCGCCCAGTTTGGCTTTTATGCC
GTCAATACCCGTGCCCGGGA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; LysR Family Regulatory Protein; LysR Family Regulatory Helix-Turn-Helix Protein; Hydrogen Peroxide-Inducible Genes Activator; Redox-Sensitive Transcriptional Activator; Transcriptional Regulator LysR Family Protein; LysR-Family Regulatory Protein; Transcriptional Regulator LysR; Oxidative Stress Transcription Regulator OxyR; Protochatechuate Degradation Transcriptional Regulator; LysR Family Regulatory Protein CidR

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MLMKGVTLRGLEVFEALAKSGSVAQAADITGLSQPAVSQQLRNLEKALGSDLVDHGRRPMVLTSAGRSFLSRTQAILSEL
RLAQSELTVMDLSHLPALSIGLIDDFDNDLTPRLATILADSLTQCRFKMVTASSHDIHRAMAEKDLHIGVAASTGELRTG
VTEYPLVEEPFILVAPRGCITDPDDVGNQLNHLPLLRYARDQLISQQIESHLSRNKMEFDDRFEIGSHLALMAMVARRIG
WAITTPLGYMRAVRFHEDIDAYALPFAGFSRRISLFAQSDWPDTVPLEVAGTVRRLTQSQMITPAINRLPWLAGQLRVIE
E

Sequences:

>Translated_321_residues
MLMKGVTLRGLEVFEALAKSGSVAQAADITGLSQPAVSQQLRNLEKALGSDLVDHGRRPMVLTSAGRSFLSRTQAILSEL
RLAQSELTVMDLSHLPALSIGLIDDFDNDLTPRLATILADSLTQCRFKMVTASSHDIHRAMAEKDLHIGVAASTGELRTG
VTEYPLVEEPFILVAPRGCITDPDDVGNQLNHLPLLRYARDQLISQQIESHLSRNKMEFDDRFEIGSHLALMAMVARRIG
WAITTPLGYMRAVRFHEDIDAYALPFAGFSRRISLFAQSDWPDTVPLEVAGTVRRLTQSQMITPAINRLPWLAGQLRVIE
E
>Mature_321_residues
MLMKGVTLRGLEVFEALAKSGSVAQAADITGLSQPAVSQQLRNLEKALGSDLVDHGRRPMVLTSAGRSFLSRTQAILSEL
RLAQSELTVMDLSHLPALSIGLIDDFDNDLTPRLATILADSLTQCRFKMVTASSHDIHRAMAEKDLHIGVAASTGELRTG
VTEYPLVEEPFILVAPRGCITDPDDVGNQLNHLPLLRYARDQLISQQIESHLSRNKMEFDDRFEIGSHLALMAMVARRIG
WAITTPLGYMRAVRFHEDIDAYALPFAGFSRRISLFAQSDWPDTVPLEVAGTVRRLTQSQMITPAINRLPWLAGQLRVIE
E

Specific function: Hydrogen Peroxide Sensor. Activates The Expression Of A Regulon Of Hydrogen Peroxide-Inducible Genes Such As Katg, Gor, Ahpc, Ahpf, Oxys (A Regulatory RNA), Dps, Fur And Grxa. Oxyr Expression Is Negatively Autoregulated By Binding To A 43 Bp Region Upstre

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790399, Length=212, Percent_Identity=26.4150943396226, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789506, Length=168, Percent_Identity=26.1904761904762, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35506; Mature: 35506

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMKGVTLRGLEVFEALAKSGSVAQAADITGLSQPAVSQQLRNLEKALGSDLVDHGRRPM
CCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
VLTSAGRSFLSRTQAILSELRLAQSELTVMDLSHLPALSIGLIDDFDNDLTPRLATILAD
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCCHHHHHHHHHH
SLTQCRFKMVTASSHDIHRAMAEKDLHIGVAASTGELRTGVTEYPLVEEPFILVAPRGCI
HHHHHHHHEEECCCHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCCCCCEEEEECCCCC
TDPDDVGNQLNHLPLLRYARDQLISQQIESHLSRNKMEFDDRFEIGSHLALMAMVARRIG
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
WAITTPLGYMRAVRFHEDIDAYALPFAGFSRRISLFAQSDWPDTVPLEVAGTVRRLTQSQ
CHHHCCHHHHHHHHHHHCCCHHHCCCCCHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHH
MITPAINRLPWLAGQLRVIEE
HHHHHHHHCCHHHCCCEEECC
>Mature Secondary Structure
MLMKGVTLRGLEVFEALAKSGSVAQAADITGLSQPAVSQQLRNLEKALGSDLVDHGRRPM
CCCCCCCHHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCE
VLTSAGRSFLSRTQAILSELRLAQSELTVMDLSHLPALSIGLIDDFDNDLTPRLATILAD
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECHHCCCCCCHHHHHHHHHH
SLTQCRFKMVTASSHDIHRAMAEKDLHIGVAASTGELRTGVTEYPLVEEPFILVAPRGCI
HHHHHHHHEEECCCHHHHHHHHHCCCEEEEEECCCCHHCCCCCCCCCCCCEEEEECCCCC
TDPDDVGNQLNHLPLLRYARDQLISQQIESHLSRNKMEFDDRFEIGSHLALMAMVARRIG
CCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHC
WAITTPLGYMRAVRFHEDIDAYALPFAGFSRRISLFAQSDWPDTVPLEVAGTVRRLTQSQ
CHHHCCHHHHHHHHHHHCCCHHHCCCCCHHHHEEEEECCCCCCCCCHHHHHHHHHHHHHH
MITPAINRLPWLAGQLRVIEE
HHHHHHHHCCHHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA