| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is bolA [C]
Identifier: 99080487
GI number: 99080487
Start: 690913
End: 691167
Strand: Direct
Name: bolA [C]
Synonym: TM1040_0646
Alternate gene names: 99080487
Gene position: 690913-691167 (Clockwise)
Preceding gene: 99080479
Following gene: 99080491
Centisome position: 21.58
GC content: 57.65
Gene sequence:
>255_bases ATGAGCGTCAGAGACGAAATCGAGAACACGTTGAGAGAAGCCTTTGATCCCAGCCGATTGGAAGTTGTGGACGACAGCGA CAGCCACGTCGGGCACGCAGGTCACGACGGAAAAGGTGAAAGTCACTTTAACGTGCTGATCCGCGCAGAGGCCTTTCTGG GCATGACGCGCGTGGCCCAACACCGGGCGGTACACAAGGCGCTTGGCGATATCGTGCCACGTATTCACGCACTTGCACTG GACATCGGCAGCTGA
Upstream 100 bases:
>100_bases ACGCATCTGTTCGACTCGGAGGCAGCAGTTTAGTCTAACGGTCGAGAGATAAAAGGGGGGCGGACACAGTTTTATGAACA ACAGGCGGAGTAGTGCAGCA
Downstream 100 bases:
>100_bases GACACAAGATCCGGCCACGCCTAATGTGGCCGGATCCTGCATTCGTTGGACTTAGTCGTCCGTCTTGCCTCGGCTTGCGC GCGCTTTGAGTGCGGCGGTC
Product: BolA-like protein
Products: NA
Alternate protein names: ORF1 [H]
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSVRDEIENTLREAFDPSRLEVVDDSDSHVGHAGHDGKGESHFNVLIRAEAFLGMTRVAQHRAVHKALGDIVPRIHALAL DIGS
Sequences:
>Translated_84_residues MSVRDEIENTLREAFDPSRLEVVDDSDSHVGHAGHDGKGESHFNVLIRAEAFLGMTRVAQHRAVHKALGDIVPRIHALAL DIGS >Mature_83_residues SVRDEIENTLREAFDPSRLEVVDDSDSHVGHAGHDGKGESHFNVLIRAEAFLGMTRVAQHRAVHKALGDIVPRIHALALD IGS
Specific function: Plays An Important Role In General Stress Response (Heat Shock, Acidic Stress, Oxidative Stress, Carbon-Starvation Stress And Osmotic Shock). Involved In Morphogenetic Pathway. Has A Role Is The Induction Of The Expression Of Daca (Pbp5), Dacc (Pbp6) And
COG id: COG0271
COG function: function code T; Stress-induced morphogen (activity unknown)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bolA/yrbA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002634 [H]
Pfam domain/function: PF01722 BolA [H]
EC number: NA
Molecular weight: Translated: 9192; Mature: 9061
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVRDEIENTLREAFDPSRLEVVDDSDSHVGHAGHDGKGESHFNVLIRAEAFLGMTRVAQ CCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH HRAVHKALGDIVPRIHALALDIGS HHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SVRDEIENTLREAFDPSRLEVVDDSDSHVGHAGHDGKGESHFNVLIRAEAFLGMTRVAQ CHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHHH HRAVHKALGDIVPRIHALALDIGS HHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1917840 [H]