| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is pabB [H]
Identifier: 99080474
GI number: 99080474
Start: 675784
End: 676980
Strand: Direct
Name: pabB [H]
Synonym: TM1040_0633
Alternate gene names: 99080474
Gene position: 675784-676980 (Clockwise)
Preceding gene: 99080472
Following gene: 99080475
Centisome position: 21.11
GC content: 63.49
Gene sequence:
>1197_bases GTGGCGTCGAAACCGCTATATGCGGGGCAAGGGAGACACTCACTGCTCACGGAGACCCTGCCGGTGGAAATCCGCTTTGA CAATGGCCCATCGAAGGGCGCGGCGCTGTTTGAAGACCCAGTTGACCTGATCCGCGCGCAAGACCCGGATGAGGTGCAGG GGGCGCTTGCGGCCTTGGACCGCGCCCGCGCCGAGGGGCATTGGGTTGCAGGCTATGCGTCTTATGAGTTGGGCTATGCG CTTGAGCCACGTTTGGCGCATCTTCTGAATGGGCGCGGGCACCGGCGTCTTCCGTTGCTGCAGTTCGGTGTGTTCCGCGC GCCGGTGGCGGCGGATGTTCCGCTTTGGGCTGGGGATGCAGGTGTGGGAGAGACGACCGCGCGCTGGGACGCTGCCCGCT ACACCGAGGCCTTTGATCGCGTTAAATCCTACATTGGCGCCGGCGACATATATCAGGCCAATCTGACTTTCCCCATCGAC GCACAGGTCTGGGGCGGGGCGGAGGCGCTTTATGCGGCCCTTGCCGCGCGTCAGCCTGTGGGCCACGGGGCGCTTGTGCG TCAGGACGGGCTGCCAACGATCCTGTCGCGCAGCCCGGAGCTCTTCTTTCGCACATCCTCGGATGGGGTGATCGAGACGC GTCCCATGAAGGGCACGCAACCGCGCAGCCTTGACCCGCGAGAGGATTCGCGACGACGGGATTTCCTGCGCTCTGACGAA AAGAACCGCGCTGAAAACCTGATGATTGTCGACCTTCTGCGCAATGACATCAGCCGCGTGTCCGAGACCGGCTCGGTCCA TGTGCCAGAGCTGTTTGCCGTGGAAAGCTATGCGACGGTGCACCAGATGGTGTCATTGGTGCGGGCACGCCTCAAGGCCG GCTGCGGTCTGGCGGACATCTTTGCGGCACTTTATCCCTGCGGGTCGATCACCGGCGCGCCCAAAATCCGTGCCATGGAG ATCCTTGCGGAACTCGAGCCCGGGGCGCGCGACATTTATTGCGGCACCATTGGCTGGGCGGCCCCCGACGGGCGGTCGGA ATTCAATGTCTCCATACGTACGATGATGCTGGAGGGCGATGCGGCCACGTTCAACGTCGGCGGTGGGCTGGTCTGGGACA GCACCTCCGCCTCCGAGTATGAGGAAGCGCTGTGGAAAGCCCGTTTTGCACAAGTGACGACCCCGATTTCCGCTTGA
Upstream 100 bases:
>100_bases CACGGGCTGCGCCCAAATTGTCCTGCGTTATAGGCAGCGAGACAAAAGGTGCAAGGGGGATCGGCCCTGCAATGCAAATT GCCGTTTTCGACCCTTTCGT
Downstream 100 bases:
>100_bases TCGAGACCTTCGGCTTTGCGCCGGGGCAGGGTGTTGCGCGGCTTGATCTGCACTTGGCGCGTCTGACGCGCTCTGCCGAG GCCTTTGGTATTCCGTTCCG
Product: aminodeoxychorismate synthase
Products: NA
Alternate protein names: ADC synthase; Para-aminobenzoate synthase component I [H]
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MASKPLYAGQGRHSLLTETLPVEIRFDNGPSKGAALFEDPVDLIRAQDPDEVQGALAALDRARAEGHWVAGYASYELGYA LEPRLAHLLNGRGHRRLPLLQFGVFRAPVAADVPLWAGDAGVGETTARWDAARYTEAFDRVKSYIGAGDIYQANLTFPID AQVWGGAEALYAALAARQPVGHGALVRQDGLPTILSRSPELFFRTSSDGVIETRPMKGTQPRSLDPREDSRRRDFLRSDE KNRAENLMIVDLLRNDISRVSETGSVHVPELFAVESYATVHQMVSLVRARLKAGCGLADIFAALYPCGSITGAPKIRAME ILAELEPGARDIYCGTIGWAAPDGRSEFNVSIRTMMLEGDAATFNVGGGLVWDSTSASEYEEALWKARFAQVTTPISA
Sequences:
>Translated_398_residues MASKPLYAGQGRHSLLTETLPVEIRFDNGPSKGAALFEDPVDLIRAQDPDEVQGALAALDRARAEGHWVAGYASYELGYA LEPRLAHLLNGRGHRRLPLLQFGVFRAPVAADVPLWAGDAGVGETTARWDAARYTEAFDRVKSYIGAGDIYQANLTFPID AQVWGGAEALYAALAARQPVGHGALVRQDGLPTILSRSPELFFRTSSDGVIETRPMKGTQPRSLDPREDSRRRDFLRSDE KNRAENLMIVDLLRNDISRVSETGSVHVPELFAVESYATVHQMVSLVRARLKAGCGLADIFAALYPCGSITGAPKIRAME ILAELEPGARDIYCGTIGWAAPDGRSEFNVSIRTMMLEGDAATFNVGGGLVWDSTSASEYEEALWKARFAQVTTPISA >Mature_397_residues ASKPLYAGQGRHSLLTETLPVEIRFDNGPSKGAALFEDPVDLIRAQDPDEVQGALAALDRARAEGHWVAGYASYELGYAL EPRLAHLLNGRGHRRLPLLQFGVFRAPVAADVPLWAGDAGVGETTARWDAARYTEAFDRVKSYIGAGDIYQANLTFPIDA QVWGGAEALYAALAARQPVGHGALVRQDGLPTILSRSPELFFRTSSDGVIETRPMKGTQPRSLDPREDSRRRDFLRSDEK NRAENLMIVDLLRNDISRVSETGSVHVPELFAVESYATVHQMVSLVRARLKAGCGLADIFAALYPCGSITGAPKIRAMEI LAELEPGARDIYCGTIGWAAPDGRSEFNVSIRTMMLEGDAATFNVGGGLVWDSTSASEYEEALWKARFAQVTTPISA
Specific function: Catalyzes the biosynthesis of 4-amino-4-deoxychorismate (ADC) from chorismate and glutamine [H]
COG id: COG0147
COG function: function code EH; Anthranilate/para-aminobenzoate synthases component I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the anthranilate synthase component I family [H]
Homologues:
Organism=Escherichia coli, GI1788114, Length=255, Percent_Identity=43.1372549019608, Blast_Score=195, Evalue=4e-51, Organism=Escherichia coli, GI1787518, Length=259, Percent_Identity=33.2046332046332, Blast_Score=121, Evalue=8e-29, Organism=Escherichia coli, GI1786809, Length=213, Percent_Identity=24.8826291079812, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI87082077, Length=197, Percent_Identity=25.8883248730964, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6320935, Length=194, Percent_Identity=37.6288659793814, Blast_Score=138, Evalue=1e-33, Organism=Saccharomyces cerevisiae, GI6324361, Length=267, Percent_Identity=29.5880149812734, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005801 - InterPro: IPR019999 - InterPro: IPR006805 - InterPro: IPR015890 - InterPro: IPR005802 [H]
Pfam domain/function: PF04715 Anth_synt_I_N; PF00425 Chorismate_bind [H]
EC number: =2.6.1.85 [H]
Molecular weight: Translated: 43275; Mature: 43144
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKPLYAGQGRHSLLTETLPVEIRFDNGPSKGAALFEDPVDLIRAQDPDEVQGALAALD CCCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHCCHHHHCCCCHHHHHHHHHHHH RARAEGHWVAGYASYELGYALEPRLAHLLNGRGHRRLPLLQFGVFRAPVAADVPLWAGDA HHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEECCCC GVGETTARWDAARYTEAFDRVKSYIGAGDIYQANLTFPIDAQVWGGAEALYAALAARQPV CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHCCCHHHHHHHHHHCCCC GHGALVRQDGLPTILSRSPELFFRTSSDGVIETRPMKGTQPRSLDPREDSRRRDFLRSDE CCCCEEECCCCCHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC KNRAENLMIVDLLRNDISRVSETGSVHVPELFAVESYATVHQMVSLVRARLKAGCGLADI CHHHCCEEHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FAALYPCGSITGAPKIRAMEILAELEPGARDIYCGTIGWAAPDGRSEFNVSIRTMMLEGD HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECC AATFNVGGGLVWDSTSASEYEEALWKARFAQVTTPISA CEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure ASKPLYAGQGRHSLLTETLPVEIRFDNGPSKGAALFEDPVDLIRAQDPDEVQGALAALD CCCCCCCCCCCHHHHHCCCEEEEEECCCCCCCCCHHHCCHHHHCCCCHHHHHHHHHHHH RARAEGHWVAGYASYELGYALEPRLAHLLNGRGHRRLPLLQFGVFRAPVAADVPLWAGDA HHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCEECCCC GVGETTARWDAARYTEAFDRVKSYIGAGDIYQANLTFPIDAQVWGGAEALYAALAARQPV CCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECCHHCCCHHHHHHHHHHCCCC GHGALVRQDGLPTILSRSPELFFRTSSDGVIETRPMKGTQPRSLDPREDSRRRDFLRSDE CCCCEEECCCCCHHHCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCC KNRAENLMIVDLLRNDISRVSETGSVHVPELFAVESYATVHQMVSLVRARLKAGCGLADI CHHHCCEEHHHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH FAALYPCGSITGAPKIRAMEILAELEPGARDIYCGTIGWAAPDGRSEFNVSIRTMMLEGD HHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEECC AATFNVGGGLVWDSTSASEYEEALWKARFAQVTTPISA CEEEECCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 3057324; 2251281 [H]