Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080475

Identifier: 99080475

GI number: 99080475

Start: 676977

End: 677582

Strand: Direct

Name: 99080475

Synonym: TM1040_0634

Alternate gene names: NA

Gene position: 676977-677582 (Clockwise)

Preceding gene: 99080474

Following gene: 99080476

Centisome position: 21.15

GC content: 62.54

Gene sequence:

>606_bases
TTGATCGAGACCTTCGGCTTTGCGCCGGGGCAGGGTGTTGCGCGGCTTGATCTGCACTTGGCGCGTCTGACGCGCTCTGC
CGAGGCCTTTGGTATTCCGTTCCGGCGTGCCAAAGCGCTGGCCATGGTTGAGGATCTCGCGGCGACCACGCCGCTGCGCT
GCCGTATGACGCTGGCTGCGGATGGTTTTCTTGCGTTGACCACCGCAGAGATGCCGGCAGCGGCAAACCTCTGGCGCGTT
GGGATTGCGCAGGAGCGCCTCGCCTCGGATGAGCCTTTGCTGCGTCACAAGACGACCCGCCGAGAGATCTACGATCGCGC
GCGGGCGCGCCTGCCCGCAGGGATCGACGAGGTGATATTTTTCAACGAACGCGACGAGATCTGCGAGGGCACAATCACCA
ATCTTGTTCTGACAAGAGAGGACGGTACGCGGCTGACGCCACCTGTGTCCTCGGGCTGCTTACCGGGCGTCTACCGCCAG
AGCCTGCTCGACGCAGGAAGCTTAAAAGAAGCCGTTTTGACAATGGCCGACCTTCAACGGGCCGCTGCACTGCATCTCAC
GAATGCGCTGCGCGGTGAGATCCCCGCGACACTGTTCGAGATCTGA

Upstream 100 bases:

>100_bases
ACGTCGGCGGTGGGCTGGTCTGGGACAGCACCTCCGCCTCCGAGTATGAGGAAGCGCTGTGGAAAGCCCGTTTTGCACAA
GTGACGACCCCGATTTCCGC

Downstream 100 bases:

>100_bases
GCGCCCATCCTGCGCCGATCGCTGCCCGACGCGGCGCTGAAACAGGCGCATTTTGCCCACATTGCTTGACAACGGGGCGG
GAACCTTGTGTACGGAAGGT

Product: hypothetical protein

Products: 4-aminobenzoate; pyruvate

Alternate protein names: Para-Aminobenzoate Synthase Component I; 4-Amino-4-Deoxychorismate Lyase; Aminotransferase Class IV; Para-Aminobenzoate Synthetase Component I; Anthranilate/Para-Aminobenzoate Synthase Component I; Para-Aminobenzoate Synthase; PabB Domain-Containing Protein; 4-Amino-4-Deoxychorismate Lyase Protein; Para-Aminobenzoate Synthase PabB; Aminodeoxychorismate Synthase Component I; Aminotransferase Protein; Anthranilate/Para-Aminobenzoate Synthase; Para-Aminobenzoate Synthetase Component I Protein; Class IV Aminotransferase; Para-Aminobenzoate Synthase Component II; Para-Aminobenzoate Synthetase; Aminodeoxychorismate Synthase; PARA-Aminobenzoate Synthetase Component I Protein; Anthranilate/Para-Aminobenzoate Synthases Component I

Number of amino acids: Translated: 201; Mature: 201

Protein sequence:

>201_residues
MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAADGFLALTTAEMPAAANLWRV
GIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIFFNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQ
SLLDAGSLKEAVLTMADLQRAAALHLTNALRGEIPATLFEI

Sequences:

>Translated_201_residues
MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAADGFLALTTAEMPAAANLWRV
GIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIFFNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQ
SLLDAGSLKEAVLTMADLQRAAALHLTNALRGEIPATLFEI
>Mature_201_residues
MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAADGFLALTTAEMPAAANLWRV
GIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIFFNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQ
SLLDAGSLKEAVLTMADLQRAAALHLTNALRGEIPATLFEI

Specific function: Unknown

COG id: COG0115

COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 4.1.3.38

Molecular weight: Translated: 21986; Mature: 21986

Theoretical pI: Translated: 6.78; Mature: 6.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
DGFLALTTAEMPAAANLWRVGIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIF
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
FNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQSLLDAGSLKEAVLTMADLQR
ECCCHHHHCCCHHEEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
AAALHLTNALRGEIPATLFEI
HHHHHHHHHHHCCCCHHHHCC
>Mature Secondary Structure
MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC
DGFLALTTAEMPAAANLWRVGIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIF
CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE
FNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQSLLDAGSLKEAVLTMADLQR
ECCCHHHHCCCHHEEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH
AAALHLTNALRGEIPATLFEI
HHHHHHHHHHHCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 4-amino-4-deoxychorismate

Specific reaction: 4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA