| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080475
Identifier: 99080475
GI number: 99080475
Start: 676977
End: 677582
Strand: Direct
Name: 99080475
Synonym: TM1040_0634
Alternate gene names: NA
Gene position: 676977-677582 (Clockwise)
Preceding gene: 99080474
Following gene: 99080476
Centisome position: 21.15
GC content: 62.54
Gene sequence:
>606_bases TTGATCGAGACCTTCGGCTTTGCGCCGGGGCAGGGTGTTGCGCGGCTTGATCTGCACTTGGCGCGTCTGACGCGCTCTGC CGAGGCCTTTGGTATTCCGTTCCGGCGTGCCAAAGCGCTGGCCATGGTTGAGGATCTCGCGGCGACCACGCCGCTGCGCT GCCGTATGACGCTGGCTGCGGATGGTTTTCTTGCGTTGACCACCGCAGAGATGCCGGCAGCGGCAAACCTCTGGCGCGTT GGGATTGCGCAGGAGCGCCTCGCCTCGGATGAGCCTTTGCTGCGTCACAAGACGACCCGCCGAGAGATCTACGATCGCGC GCGGGCGCGCCTGCCCGCAGGGATCGACGAGGTGATATTTTTCAACGAACGCGACGAGATCTGCGAGGGCACAATCACCA ATCTTGTTCTGACAAGAGAGGACGGTACGCGGCTGACGCCACCTGTGTCCTCGGGCTGCTTACCGGGCGTCTACCGCCAG AGCCTGCTCGACGCAGGAAGCTTAAAAGAAGCCGTTTTGACAATGGCCGACCTTCAACGGGCCGCTGCACTGCATCTCAC GAATGCGCTGCGCGGTGAGATCCCCGCGACACTGTTCGAGATCTGA
Upstream 100 bases:
>100_bases ACGTCGGCGGTGGGCTGGTCTGGGACAGCACCTCCGCCTCCGAGTATGAGGAAGCGCTGTGGAAAGCCCGTTTTGCACAA GTGACGACCCCGATTTCCGC
Downstream 100 bases:
>100_bases GCGCCCATCCTGCGCCGATCGCTGCCCGACGCGGCGCTGAAACAGGCGCATTTTGCCCACATTGCTTGACAACGGGGCGG GAACCTTGTGTACGGAAGGT
Product: hypothetical protein
Products: 4-aminobenzoate; pyruvate
Alternate protein names: Para-Aminobenzoate Synthase Component I; 4-Amino-4-Deoxychorismate Lyase; Aminotransferase Class IV; Para-Aminobenzoate Synthetase Component I; Anthranilate/Para-Aminobenzoate Synthase Component I; Para-Aminobenzoate Synthase; PabB Domain-Containing Protein; 4-Amino-4-Deoxychorismate Lyase Protein; Para-Aminobenzoate Synthase PabB; Aminodeoxychorismate Synthase Component I; Aminotransferase Protein; Anthranilate/Para-Aminobenzoate Synthase; Para-Aminobenzoate Synthetase Component I Protein; Class IV Aminotransferase; Para-Aminobenzoate Synthase Component II; Para-Aminobenzoate Synthetase; Aminodeoxychorismate Synthase; PARA-Aminobenzoate Synthetase Component I Protein; Anthranilate/Para-Aminobenzoate Synthases Component I
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAADGFLALTTAEMPAAANLWRV GIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIFFNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQ SLLDAGSLKEAVLTMADLQRAAALHLTNALRGEIPATLFEI
Sequences:
>Translated_201_residues MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAADGFLALTTAEMPAAANLWRV GIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIFFNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQ SLLDAGSLKEAVLTMADLQRAAALHLTNALRGEIPATLFEI >Mature_201_residues MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAADGFLALTTAEMPAAANLWRV GIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIFFNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQ SLLDAGSLKEAVLTMADLQRAAALHLTNALRGEIPATLFEI
Specific function: Unknown
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.1.3.38
Molecular weight: Translated: 21986; Mature: 21986
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC DGFLALTTAEMPAAANLWRVGIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIF CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE FNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQSLLDAGSLKEAVLTMADLQR ECCCHHHHCCCHHEEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH AAALHLTNALRGEIPATLFEI HHHHHHHHHHHCCCCHHHHCC >Mature Secondary Structure MIETFGFAPGQGVARLDLHLARLTRSAEAFGIPFRRAKALAMVEDLAATTPLRCRMTLAA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEEEEEEC DGFLALTTAEMPAAANLWRVGIAQERLASDEPLLRHKTTRREIYDRARARLPAGIDEVIF CCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEE FNERDEICEGTITNLVLTREDGTRLTPPVSSGCLPGVYRQSLLDAGSLKEAVLTMADLQR ECCCHHHHCCCHHEEEEECCCCCEECCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH AAALHLTNALRGEIPATLFEI HHHHHHHHHHHCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 4-amino-4-deoxychorismate
Specific reaction: 4-amino-4-deoxychorismate = 4-aminobenzoate + pyruvate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA