| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is cyaA [H]
Identifier: 99080454
GI number: 99080454
Start: 652460
End: 654220
Strand: Reverse
Name: cyaA [H]
Synonym: TM1040_0613
Alternate gene names: 99080454
Gene position: 654220-652460 (Counterclockwise)
Preceding gene: 99080455
Following gene: 99080453
Centisome position: 20.44
GC content: 60.42
Gene sequence:
>1761_bases ATGTTCCCGCAAGGTGTTACAGAGGCGACATGCGCGCCGCCCCTCCAATGCAAGAAGGACAGCTCGCTCTTGGCCCAAGC ACTCTGGCAAGGCAACTGGATCCACCGCAGCCGGCTGGTCTCCGGCCTTGTGCTTTTTACTTTTGCATTCTTTCACTTTC TGAATGTTGCCGCCGGTCTGGTCTCGCCCGCGCTGATGGAGGCGATGCAGGAGGTGCGCGAACCTTTCAGCAAAAGCCCC CCCGGTCAGGTGCTTCTGTACGGGTCGCTTTTGGTGCATGCCGGTCTAGCACTCTGGCAGGTGGCGATGCGGCGCACACT GCGGATGAGCTTTGTGCAGGGATTGCAATTGCTTCTTGGGGTACTGATCCCGCTGCAATTGTTTCAACATATTGCGCACA CGAACTACGCCGCCCGCGTGCAAGGCTATGAGGACGAAATGTCCTCGGTCGTGGTGATGCTATGGTCAGGGCCGGAAGCG CTGCACCAGTATCTCCTGCTGCTGGCGGTATGGATACATGGCTGCGTCGGCCTTCACATGTGGCTGCGCCTGACAAGATG GTGGGGGACCCTGACACCCTATATGATCGGGCTTGCGGTCTTGATCCCCGCGCTGGCCCTAGCCGGTTTGGTGACTGAAG GGCGCCGCATGTGGGCGTTCTTTTCAAACCCTGAGGTCGCGCAACAAATCATCGAGGATTACAACTGGCCGGATGCCGCG GGTTTTGCCCATCTGGCGATGGTCTCCGACTATAGCATCTCGATCTTTTTTGGCTGTCTCGTGCTCGCCCTGGGCACCTA TGGGGTGAGGCGCCTCATTCGGCGTCGTCGATCGGTGCGCATCACCTACGAGCGTGGTCCCGAGGTGACGGCCGACCGCG GGCTGACCGTGCTGGAAATCTCGCAAATGAATGGCATTGCGCACCCTTCGCTTTGTGGCGGCAAAGGGCGCTGCACGACC TGCCGCGTGGCAATTCTGGCGGGGGGCGACGATCTCCCCCCACCGACAGCGGCTGAGGCCCGCAGTTTGCGCGCCATCAA CGCGCCCGAGAACATGCGTCTGGCATGCCAGATCACGCCCACCTCGGCTTTGACGGTCAAGCGTCTCTATATGGCAAAGG GCCGTCATCAGGTTCACGCAACCCAAGGCGAAGAAAAAACCATCGCGGTGCTGTTTCTCGACATTCGTGGTTTTACCGCG CGGTCCGAGGGGCTCTTGCCCTATGATGTTGTGTTCCTGCTCAACCGGTTTTTTGACGCCATTGTCCCGCAAATCACACG CGCTGGCGGGGCCGTCGACAAATATATGGGGGATGGGTTGCTCGCTCTGTTTGAAACCTCGGATGCCACCAGTTCGGCAC AGGCCGCGCTGACAGCGGCAGCCGACATTGGTTCCGCGCTGGAGCGGTTCAATCGCCTGCTGGTCGCCGAAGGAGAACAG CCATTGCGCATCGGCATGGGGGTTCACACCGGAACCGTCGTTCTGGGTGAAATCGGTGCAGCCGGGCATGCGCCCCGTAC GCTCATTGGTGCCACTGTCAATGCCGCAAGCCGCCTTGAGGCCAAGACCAAGGAGCTCGGCGTCGAAATCCTCATTTCGC GCGCAGTCTTCGACACCGCAACCCTGCCCCAAGCTGAGACACGGTTTCAAACCTTCGAGCTGCGTGGCGTGGATGCCCCG GTTGCGGCCCTGCCCCTTGAGCATGCATCAAGGCTGAGTGACTTGTTGGCAGACACTCCCTCGGAGAACGCCCTTCGGTA A
Upstream 100 bases:
>100_bases TTGCGAACTAATACGCAGCCAGGCGGACAGCGCGCCCTGCGCAGCACCATTCTAGGGTCGCAACCACCGGTATCATGAGA AGGGCTTGTCGGCGGGCGGC
Downstream 100 bases:
>100_bases CATCGGCGCGAATGAACCATCCAACCCTGAGCGCGCAACGGTGAATTCTGTTCCAAAACCGGGCCCGTTTGCATGACCCG TGATTGAAACACGTCACATT
Product: adenylate/guanylate cyclase
Products: NA
Alternate protein names: ATP pyrophosphate-lyase 1; Adenylyl cyclase 1; AC 1 [H]
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MFPQGVTEATCAPPLQCKKDSSLLAQALWQGNWIHRSRLVSGLVLFTFAFFHFLNVAAGLVSPALMEAMQEVREPFSKSP PGQVLLYGSLLVHAGLALWQVAMRRTLRMSFVQGLQLLLGVLIPLQLFQHIAHTNYAARVQGYEDEMSSVVVMLWSGPEA LHQYLLLLAVWIHGCVGLHMWLRLTRWWGTLTPYMIGLAVLIPALALAGLVTEGRRMWAFFSNPEVAQQIIEDYNWPDAA GFAHLAMVSDYSISIFFGCLVLALGTYGVRRLIRRRRSVRITYERGPEVTADRGLTVLEISQMNGIAHPSLCGGKGRCTT CRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQITPTSALTVKRLYMAKGRHQVHATQGEEKTIAVLFLDIRGFTA RSEGLLPYDVVFLLNRFFDAIVPQITRAGGAVDKYMGDGLLALFETSDATSSAQAALTAAADIGSALERFNRLLVAEGEQ PLRIGMGVHTGTVVLGEIGAAGHAPRTLIGATVNAASRLEAKTKELGVEILISRAVFDTATLPQAETRFQTFELRGVDAP VAALPLEHASRLSDLLADTPSENALR
Sequences:
>Translated_586_residues MFPQGVTEATCAPPLQCKKDSSLLAQALWQGNWIHRSRLVSGLVLFTFAFFHFLNVAAGLVSPALMEAMQEVREPFSKSP PGQVLLYGSLLVHAGLALWQVAMRRTLRMSFVQGLQLLLGVLIPLQLFQHIAHTNYAARVQGYEDEMSSVVVMLWSGPEA LHQYLLLLAVWIHGCVGLHMWLRLTRWWGTLTPYMIGLAVLIPALALAGLVTEGRRMWAFFSNPEVAQQIIEDYNWPDAA GFAHLAMVSDYSISIFFGCLVLALGTYGVRRLIRRRRSVRITYERGPEVTADRGLTVLEISQMNGIAHPSLCGGKGRCTT CRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQITPTSALTVKRLYMAKGRHQVHATQGEEKTIAVLFLDIRGFTA RSEGLLPYDVVFLLNRFFDAIVPQITRAGGAVDKYMGDGLLALFETSDATSSAQAALTAAADIGSALERFNRLLVAEGEQ PLRIGMGVHTGTVVLGEIGAAGHAPRTLIGATVNAASRLEAKTKELGVEILISRAVFDTATLPQAETRFQTFELRGVDAP VAALPLEHASRLSDLLADTPSENALR >Mature_586_residues MFPQGVTEATCAPPLQCKKDSSLLAQALWQGNWIHRSRLVSGLVLFTFAFFHFLNVAAGLVSPALMEAMQEVREPFSKSP PGQVLLYGSLLVHAGLALWQVAMRRTLRMSFVQGLQLLLGVLIPLQLFQHIAHTNYAARVQGYEDEMSSVVVMLWSGPEA LHQYLLLLAVWIHGCVGLHMWLRLTRWWGTLTPYMIGLAVLIPALALAGLVTEGRRMWAFFSNPEVAQQIIEDYNWPDAA GFAHLAMVSDYSISIFFGCLVLALGTYGVRRLIRRRRSVRITYERGPEVTADRGLTVLEISQMNGIAHPSLCGGKGRCTT CRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQITPTSALTVKRLYMAKGRHQVHATQGEEKTIAVLFLDIRGFTA RSEGLLPYDVVFLLNRFFDAIVPQITRAGGAVDKYMGDGLLALFETSDATSSAQAALTAAADIGSALERFNRLLVAEGEQ PLRIGMGVHTGTVVLGEIGAAGHAPRTLIGATVNAASRLEAKTKELGVEILISRAVFDTATLPQAETRFQTFELRGVDAP VAALPLEHASRLSDLLADTPSENALR
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate cyclase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 [H]
Pfam domain/function: PF00211 Guanylate_cyc [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 63828; Mature: 63828
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: PS50125 GUANYLATE_CYCLASES_2 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFPQGVTEATCAPPLQCKKDSSLLAQALWQGNWIHRSRLVSGLVLFTFAFFHFLNVAAGL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSPALMEAMQEVREPFSKSPPGQVLLYGSLLVHAGLALWQVAMRRTLRMSFVQGLQLLLG HHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIPLQLFQHIAHTNYAARVQGYEDEMSSVVVMLWSGPEALHQYLLLLAVWIHGCVGLHM HHHHHHHHHHHHHCCHHHEECCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH WLRLTRWWGTLTPYMIGLAVLIPALALAGLVTEGRRMWAFFSNPEVAQQIIEDYNWPDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCC GFAHLAMVSDYSISIFFGCLVLALGTYGVRRLIRRRRSVRITYERGPEVTADRGLTVLEI CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEEE SQMNGIAHPSLCGGKGRCTTCRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQITP HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCEEECCCCCCEEEEEECC TSALTVKRLYMAKGRHQVHATQGEEKTIAVLFLDIRGFTARSEGLLPYDVVFLLNRFFDA CHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH IVPQITRAGGAVDKYMGDGLLALFETSDATSSAQAALTAAADIGSALERFNRLLVAEGEQ HHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC PLRIGMGVHTGTVVLGEIGAAGHAPRTLIGATVNAASRLEAKTKELGVEILISRAVFDTA CEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TLPQAETRFQTFELRGVDAPVAALPLEHASRLSDLLADTPSENALR CCCCHHHHHEEEEECCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MFPQGVTEATCAPPLQCKKDSSLLAQALWQGNWIHRSRLVSGLVLFTFAFFHFLNVAAGL CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH VSPALMEAMQEVREPFSKSPPGQVLLYGSLLVHAGLALWQVAMRRTLRMSFVQGLQLLLG HHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIPLQLFQHIAHTNYAARVQGYEDEMSSVVVMLWSGPEALHQYLLLLAVWIHGCVGLHM HHHHHHHHHHHHHCCHHHEECCCHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHH WLRLTRWWGTLTPYMIGLAVLIPALALAGLVTEGRRMWAFFSNPEVAQQIIEDYNWPDAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCC GFAHLAMVSDYSISIFFGCLVLALGTYGVRRLIRRRRSVRITYERGPEVTADRGLTVLEI CHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCCCCEEEEE SQMNGIAHPSLCGGKGRCTTCRVAILAGGDDLPPPTAAEARSLRAINAPENMRLACQITP HHHCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHHCEEECCCCCCEEEEEECC TSALTVKRLYMAKGRHQVHATQGEEKTIAVLFLDIRGFTARSEGLLPYDVVFLLNRFFDA CHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH IVPQITRAGGAVDKYMGDGLLALFETSDATSSAQAALTAAADIGSALERFNRLLVAEGEQ HHHHHHHCCCHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCC PLRIGMGVHTGTVVLGEIGAAGHAPRTLIGATVNAASRLEAKTKELGVEILISRAVFDTA CEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TLPQAETRFQTFELRGVDAPVAALPLEHASRLSDLLADTPSENALR CCCCHHHHHEEEEECCCCCCHHHCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9523018; 8418825 [H]