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The map label for this gene is ybaP [H]

Identifier: 99080434

GI number: 99080434

Start: 634464

End: 635525

Strand: Reverse

Name: ybaP [H]

Synonym: TM1040_0593

Alternate gene names: 99080434

Gene position: 635525-634464 (Counterclockwise)

Preceding gene: 99080435

Following gene: 99080433

Centisome position: 19.85

GC content: 62.81

Gene sequence:

>1062_bases
GTGAAGTATTTAAGGGGACGCGCCACACTGATCGAACGGTGCGGGAAGGCGCTGCTGGAGTTGCGCGCGCGGGCTTTCAC
GGTGCTCATCGCCGCAGTGCTGATGGCGTCGCTGACCCAAGCGGCTGCAGCACGCTGTGATGGCATTGATCTTCGCCAAC
ATCTGACCGAGAGCGCGCGCCACAAACTCGACGACGCGCTCGCCAAGGTCCCCTTCGCGGTCGGCAATCATTGGGTTGCG
ATAAAAGGCGATCAGCGCATCGATGTGATTGGCACGCAACACAGCGGTGATGCCCGCATGTTCCCCATCATGCGCAGGCT
ACGCCCGGTGATCGAGCAGGCAGATGCAATATTCCTTGAAGTCACCGAACCGCAGATGCGGGCCGCCGACACGGCGCAGG
ACAGCTTTGCGCGCTACTTCCTGCTGCCGCCGGGACAAAGGCTGGACCAGATGATCCCTGAAGCGGAGTGGCGACTGCTG
ATGGCGCGCCTTGCCCCATTTGGCATAAGTTCCGACGCGGCCGCGCGCATGCAGCCCTGGTATCTTTCGGATTTCCTCAC
CGGCACCGATTGCCGCAAGCGCGGCCTTGGCAGCCGGCGGGGGTTGGACGACCGCATCGAGCACGTCGCCCGAACCGCCG
GCATCCCGACGTTTGGCCTGGAATCGCCCGAAGCCGGACTGGCCGCCCTTGCCTCCATGCCGCTCTCCGATCAAGTCAGG
ATGTTGCGTTTTGATCTGCGCAGCGAGACACGGCATCAGGATCTCTACGTCACCTTGTCGGACTCTTTCTTTGAGGGCCG
CCTGACCGAAGGACGCATCTTGCTGCTGTGGATGATGTACAGAGACCTTGATGTCCCCCGGCAGGAGGTCCATCGACTGC
TTGCGAGCTTTGACAGGGTCGTTCTGGAACGCCGCAACCGCACCTGGGTCAAGCGATTGCTGGCGCGCAAGGAGCCACGT
CTGGTTGTGGCCGTCGGGGCTGCGCATCTGGCCGGAGACACCGGAGTCTTGAACCTGTTGCACCGCGCGGGTTATGCGCT
TTCGCCCGTAGACGACCGCTAG

Upstream 100 bases:

>100_bases
ACCGACTGGTGATCGCGGTGGGCGCGGCGCATCTCCCCGGAGAGGCCGGGGTGCTGGCCCTTCTCGAAGCAGAGGGTTAT
CAAATTGAAGAGGCGCTCCG

Downstream 100 bases:

>100_bases
GGGCGCCTTATTGCGCCCCAACTGCCAAGAGCTATGCACAGAGCTGAACCCAGCAGCCCGCTTGACGCGGGGTGACAAAG
CTAGCGTCCCTGTTATAAGG

Product: GumN

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MKYLRGRATLIERCGKALLELRARAFTVLIAAVLMASLTQAAAARCDGIDLRQHLTESARHKLDDALAKVPFAVGNHWVA
IKGDQRIDVIGTQHSGDARMFPIMRRLRPVIEQADAIFLEVTEPQMRAADTAQDSFARYFLLPPGQRLDQMIPEAEWRLL
MARLAPFGISSDAAARMQPWYLSDFLTGTDCRKRGLGSRRGLDDRIEHVARTAGIPTFGLESPEAGLAALASMPLSDQVR
MLRFDLRSETRHQDLYVTLSDSFFEGRLTEGRILLLWMMYRDLDVPRQEVHRLLASFDRVVLERRNRTWVKRLLARKEPR
LVVAVGAAHLAGDTGVLNLLHRAGYALSPVDDR

Sequences:

>Translated_353_residues
MKYLRGRATLIERCGKALLELRARAFTVLIAAVLMASLTQAAAARCDGIDLRQHLTESARHKLDDALAKVPFAVGNHWVA
IKGDQRIDVIGTQHSGDARMFPIMRRLRPVIEQADAIFLEVTEPQMRAADTAQDSFARYFLLPPGQRLDQMIPEAEWRLL
MARLAPFGISSDAAARMQPWYLSDFLTGTDCRKRGLGSRRGLDDRIEHVARTAGIPTFGLESPEAGLAALASMPLSDQVR
MLRFDLRSETRHQDLYVTLSDSFFEGRLTEGRILLLWMMYRDLDVPRQEVHRLLASFDRVVLERRNRTWVKRLLARKEPR
LVVAVGAAHLAGDTGVLNLLHRAGYALSPVDDR
>Mature_353_residues
MKYLRGRATLIERCGKALLELRARAFTVLIAAVLMASLTQAAAARCDGIDLRQHLTESARHKLDDALAKVPFAVGNHWVA
IKGDQRIDVIGTQHSGDARMFPIMRRLRPVIEQADAIFLEVTEPQMRAADTAQDSFARYFLLPPGQRLDQMIPEAEWRLL
MARLAPFGISSDAAARMQPWYLSDFLTGTDCRKRGLGSRRGLDDRIEHVARTAGIPTFGLESPEAGLAALASMPLSDQVR
MLRFDLRSETRHQDLYVTLSDSFFEGRLTEGRILLLWMMYRDLDVPRQEVHRLLASFDRVVLERRNRTWVKRLLARKEPR
LVVAVGAAHLAGDTGVLNLLHRAGYALSPVDDR

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786689, Length=277, Percent_Identity=27.0758122743682, Blast_Score=75, Evalue=5e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010891 [H]

Pfam domain/function: PF07446 GumN [H]

EC number: NA

Molecular weight: Translated: 39774; Mature: 39774

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLRGRATLIERCGKALLELRARAFTVLIAAVLMASLTQAAAARCDGIDLRQHLTESAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
HKLDDALAKVPFAVGNHWVAIKGDQRIDVIGTQHSGDARMFPIMRRLRPVIEQADAIFLE
HHHHHHHHHCCHHHCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEE
VTEPQMRAADTAQDSFARYFLLPPGQRLDQMIPEAEWRLLMARLAPFGISSDAAARMQPW
ECCCHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCH
YLSDFLTGTDCRKRGLGSRRGLDDRIEHVARTAGIPTFGLESPEAGLAALASMPLSDQVR
HHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHH
MLRFDLRSETRHQDLYVTLSDSFFEGRLTEGRILLLWMMYRDLDVPRQEVHRLLASFDRV
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VLERRNRTWVKRLLARKEPRLVVAVGAAHLAGDTGVLNLLHRAGYALSPVDDR
HHHHCCHHHHHHHHHCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKYLRGRATLIERCGKALLELRARAFTVLIAAVLMASLTQAAAARCDGIDLRQHLTESAR
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
HKLDDALAKVPFAVGNHWVAIKGDQRIDVIGTQHSGDARMFPIMRRLRPVIEQADAIFLE
HHHHHHHHHCCHHHCCEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCEEEEE
VTEPQMRAADTAQDSFARYFLLPPGQRLDQMIPEAEWRLLMARLAPFGISSDAAARMQPW
ECCCHHHHHHHHHHHHHEEEECCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHCCCH
YLSDFLTGTDCRKRGLGSRRGLDDRIEHVARTAGIPTFGLESPEAGLAALASMPLSDQVR
HHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCHHHHH
MLRFDLRSETRHQDLYVTLSDSFFEGRLTEGRILLLWMMYRDLDVPRQEVHRLLASFDRV
HHHHHHHHCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VLERRNRTWVKRLLARKEPRLVVAVGAAHLAGDTGVLNLLHRAGYALSPVDDR
HHHHCCHHHHHHHHHCCCCCEEEEECCHHHCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]