| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080435
Identifier: 99080435
GI number: 99080435
Start: 635522
End: 636592
Strand: Reverse
Name: 99080435
Synonym: TM1040_0594
Alternate gene names: NA
Gene position: 636592-635522 (Counterclockwise)
Preceding gene: 99080444
Following gene: 99080434
Centisome position: 19.89
GC content: 61.34
Gene sequence:
>1071_bases TTGCTTTCCCGCGCGCAACGCTCCGGTGACAGACGGCATGCGCTTGGCCACTCTGGTGCTGTCCCTGCCACGCTGCGGCC GTTTCTCTCGTTGATCTGTTTCTGCTTGGTCGCAGTCTGGATGGCCACGCCTCTTCGGGCCGCCTGCAGCGGCCTAGACC TGCGGGAGAGCGCCGCGCCAGGTATGTGGGCAGAGATCGAGGCGGAGATTGCCCTCACCCCGTTTGCGCGCGGGCTCAGC TGGGTCGCAACCCGCGGCGATCGTCGCCTACATATCATTGGCACCATGCATCTGAACGATCCGCGCCACGATGCGCTGGT TGCGCATATGGCGCCTGCAATTCAGGCGGCCGATGCGGTCTTGCTCGAGGTCAATCGTGCAGACAAGGCCAGACTCGAGC GCACCCTGGCTGAGACGCCATCGCTCATCTTTATCACCGAGGGGCCGACCTTGATCGACCGCCTGCCCCCAGAGGAGTGG GACGAGATCGCAGAGCGCGCCGGCGCTGCCGGAATCCCGCCTTTCATGGCGGCCAAGATGCGACCCTGGTTTCTGTCATT GTCAATGTCTGTGCCACTCTGTGCGCGCGCAATTGAGGATGTCACTGATGGGCTCGACATGAAATTGATGACCCTGGCAG AGCGCGCCGGCGTCGAAACCCTATCGCTCGAAGATCCTCTGGGCTTGTTCCAGTTGTTTGACGCCACGCCAATCGAAGAG CAGATCAAGGAACTGCGAAGCTACATCGCCATGGCAGGCGTGGGCGCGGATGATTTCTACACGATGGTGGAAAGCTATTT TGACGGGGAGGTTCAGGCCTACGTCCTTTTGCAGTTGAAGCAATTTCTCACATCAGAAAGCGACCTCTCGGTAGCAGAGC GTCAGGCGCAGGTGGATGACCTGCTGGAGGCTCTGCTCTACCAGCGCAACCGTGATTGGATCCCGGTCATAGAAGCCACT GCGGGCAACCGACTGGTGATCGCGGTGGGCGCGGCGCATCTCCCCGGAGAGGCCGGGGTGCTGGCCCTTCTCGAAGCAGA GGGTTATCAAATTGAAGAGGCGCTCCGGTGA
Upstream 100 bases:
>100_bases AGAGATCCTGTTCACGTTCCATCCCGGCCATGCTTGCCCCGGCTCGGTCTCAATGGCAATGTGTCCGAGACTGATTTTTA TGCGGAATACCATGAACAGA
Downstream 100 bases:
>100_bases AGTATTTAAGGGGACGCGCCACACTGATCGAACGGTGCGGGAAGGCGCTGCTGGAGTTGCGCGCGCGGGCTTTCACGGTG CTCATCGCCGCAGTGCTGAT
Product: GumN
Products: NA
Alternate protein names: GumN Protein; SLA2 Protein
Number of amino acids: Translated: 356; Mature: 356
Protein sequence:
>356_residues MLSRAQRSGDRRHALGHSGAVPATLRPFLSLICFCLVAVWMATPLRAACSGLDLRESAAPGMWAEIEAEIALTPFARGLS WVATRGDRRLHIIGTMHLNDPRHDALVAHMAPAIQAADAVLLEVNRADKARLERTLAETPSLIFITEGPTLIDRLPPEEW DEIAERAGAAGIPPFMAAKMRPWFLSLSMSVPLCARAIEDVTDGLDMKLMTLAERAGVETLSLEDPLGLFQLFDATPIEE QIKELRSYIAMAGVGADDFYTMVESYFDGEVQAYVLLQLKQFLTSESDLSVAERQAQVDDLLEALLYQRNRDWIPVIEAT AGNRLVIAVGAAHLPGEAGVLALLEAEGYQIEEALR
Sequences:
>Translated_356_residues MLSRAQRSGDRRHALGHSGAVPATLRPFLSLICFCLVAVWMATPLRAACSGLDLRESAAPGMWAEIEAEIALTPFARGLS WVATRGDRRLHIIGTMHLNDPRHDALVAHMAPAIQAADAVLLEVNRADKARLERTLAETPSLIFITEGPTLIDRLPPEEW DEIAERAGAAGIPPFMAAKMRPWFLSLSMSVPLCARAIEDVTDGLDMKLMTLAERAGVETLSLEDPLGLFQLFDATPIEE QIKELRSYIAMAGVGADDFYTMVESYFDGEVQAYVLLQLKQFLTSESDLSVAERQAQVDDLLEALLYQRNRDWIPVIEAT AGNRLVIAVGAAHLPGEAGVLALLEAEGYQIEEALR >Mature_356_residues MLSRAQRSGDRRHALGHSGAVPATLRPFLSLICFCLVAVWMATPLRAACSGLDLRESAAPGMWAEIEAEIALTPFARGLS WVATRGDRRLHIIGTMHLNDPRHDALVAHMAPAIQAADAVLLEVNRADKARLERTLAETPSLIFITEGPTLIDRLPPEEW DEIAERAGAAGIPPFMAAKMRPWFLSLSMSVPLCARAIEDVTDGLDMKLMTLAERAGVETLSLEDPLGLFQLFDATPIEE QIKELRSYIAMAGVGADDFYTMVESYFDGEVQAYVLLQLKQFLTSESDLSVAERQAQVDDLLEALLYQRNRDWIPVIEAT AGNRLVIAVGAAHLPGEAGVLALLEAEGYQIEEALR
Specific function: Unknown
COG id: COG3735
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38997; Mature: 38997
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSRAQRSGDRRHALGHSGAVPATLRPFLSLICFCLVAVWMATPLRAACSGLDLRESAAP CCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCC GMWAEIEAEIALTPFARGLSWVATRGDRRLHIIGTMHLNDPRHDALVAHMAPAIQAADAV CCCEEEEEEEEECHHHHCHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCC LLEVNRADKARLERTLAETPSLIFITEGPTLIDRLPPEEWDEIAERAGAAGIPPFMAAKM EEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCC RPWFLSLSMSVPLCARAIEDVTDGLDMKLMTLAERAGVETLSLEDPLGLFQLFDATPIEE CCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCHHH QIKELRSYIAMAGVGADDFYTMVESYFDGEVQAYVLLQLKQFLTSESDLSVAERQAQVDD HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LLEALLYQRNRDWIPVIEATAGNRLVIAVGAAHLPGEAGVLALLEAEGYQIEEALR HHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHCC >Mature Secondary Structure MLSRAQRSGDRRHALGHSGAVPATLRPFLSLICFCLVAVWMATPLRAACSGLDLRESAAP CCCCCHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCCC GMWAEIEAEIALTPFARGLSWVATRGDRRLHIIGTMHLNDPRHDALVAHMAPAIQAADAV CCCEEEEEEEEECHHHHCHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHHCCC LLEVNRADKARLERTLAETPSLIFITEGPTLIDRLPPEEWDEIAERAGAAGIPPFMAAKM EEEECCHHHHHHHHHHHCCCCEEEEECCCHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCC RPWFLSLSMSVPLCARAIEDVTDGLDMKLMTLAERAGVETLSLEDPLGLFQLFDATPIEE CCEEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEECCCCHHHHHHHCCCCHHH QIKELRSYIAMAGVGADDFYTMVESYFDGEVQAYVLLQLKQFLTSESDLSVAERQAQVDD HHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH LLEALLYQRNRDWIPVIEATAGNRLVIAVGAAHLPGEAGVLALLEAEGYQIEEALR HHHHHHHHCCCCCCEEEEECCCCEEEEEEECCCCCCCCCEEEEEECCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA