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The map label for this gene is yggE [H]

Identifier: 99080425

GI number: 99080425

Start: 624063

End: 624779

Strand: Direct

Name: yggE [H]

Synonym: TM1040_0584

Alternate gene names: 99080425

Gene position: 624063-624779 (Clockwise)

Preceding gene: 99080423

Following gene: 99080432

Centisome position: 19.5

GC content: 60.67

Gene sequence:

>717_bases
ATGTTGAAATCAAAAACCGCTGCATTGATGCTGGCAAGCGCCGTTGCCTTGACCCCTCTGTCCCTTGGCGCAGAAGAATT
GCGCCAGATCCATGTCACAGGGGAAGCCACATCGGAGGTCACGCCTGATCGGGCCCATATCACCCTTGGCGTACGCGTCG
AGGCCAAGGACGCCGGTGCCGCCATGGAACAGGTCTCCCAGCGTATGCAGGAGGTGACGGCGCGCCTCGGCGACAGTGGC
ATCGCAGCGCAGGATATGCAGACAGAGCAGGTGTCCTTGCATCCGGTTTGGAACCAGGTGACGCGAGATGGCGATCAGAT
GCGTGAGGTCACCGGTTTTGAGGCGTCAAACCTTTTGCGTGTTACCTTGCAGGATCTCGACGCGATGGGTGGGGTTCTTG
ATGATGTGCTCGCGGCGGGGGCCAATGAGTTTCGCGGTTTGACCTTCACCTACAGTGAGCGGGAAGCGGCTGAAAACCTT
TTGCGCACAATGGCCTATGAGAACGCCTACCGGAAGGCGCAACAGCTTGCCGAAGCCTCCGGGATGGCCTTGGGGCCGGT
GCGGGACATTCGAGATGGGGGCGCCTCGGGGGGGGCGCCTATGATGGCGATGGAGATGGCACGGTCGTCAGATATGCCGA
TTTCTCCGGGCGCGTTGAGCCTGCGTCACAGCGTGACCGTGACCTTTGATATCTCCGTGCCCGATGGCCCGAACTGA

Upstream 100 bases:

>100_bases
AACCCGCCGAGTGGAAGCAAAAGCGCAACATCACCCCTTGCGCGCGAGGATTTGCCGCTCCCATCTAGGCGTATAGTCAG
ACATAGATTGAGGACTTCTG

Downstream 100 bases:

>100_bases
TCCGAATTGAAGGGCTGTTGATTTATGGAAAAAGGCCGGGGAATGCCCCGGCCTTTTGCAGTTTTCTAAGTCGTGTTTGA
CCGCGGTGACGGCTCAGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MLKSKTAALMLASAVALTPLSLGAEELRQIHVTGEATSEVTPDRAHITLGVRVEAKDAGAAMEQVSQRMQEVTARLGDSG
IAAQDMQTEQVSLHPVWNQVTRDGDQMREVTGFEASNLLRVTLQDLDAMGGVLDDVLAAGANEFRGLTFTYSEREAAENL
LRTMAYENAYRKAQQLAEASGMALGPVRDIRDGGASGGAPMMAMEMARSSDMPISPGALSLRHSVTVTFDISVPDGPN

Sequences:

>Translated_238_residues
MLKSKTAALMLASAVALTPLSLGAEELRQIHVTGEATSEVTPDRAHITLGVRVEAKDAGAAMEQVSQRMQEVTARLGDSG
IAAQDMQTEQVSLHPVWNQVTRDGDQMREVTGFEASNLLRVTLQDLDAMGGVLDDVLAAGANEFRGLTFTYSEREAAENL
LRTMAYENAYRKAQQLAEASGMALGPVRDIRDGGASGGAPMMAMEMARSSDMPISPGALSLRHSVTVTFDISVPDGPN
>Mature_238_residues
MLKSKTAALMLASAVALTPLSLGAEELRQIHVTGEATSEVTPDRAHITLGVRVEAKDAGAAMEQVSQRMQEVTARLGDSG
IAAQDMQTEQVSLHPVWNQVTRDGDQMREVTGFEASNLLRVTLQDLDAMGGVLDDVLAAGANEFRGLTFTYSEREAAENL
LRTMAYENAYRKAQQLAEASGMALGPVRDIRDGGASGGAPMMAMEMARSSDMPISPGALSLRHSVTVTFDISVPDGPN

Specific function: Unknown

COG id: COG2968

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789289, Length=236, Percent_Identity=27.9661016949153, Blast_Score=73, Evalue=1e-14,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007497 [H]

Pfam domain/function: PF04402 DUF541 [H]

EC number: NA

Molecular weight: Translated: 25348; Mature: 25348

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKSKTAALMLASAVALTPLSLGAEELRQIHVTGEATSEVTPDRAHITLGVRVEAKDAGA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCEEEEEEEEEECCHHHH
AMEQVSQRMQEVTARLGDSGIAAQDMQTEQVSLHPVWNQVTRDGDQMREVTGFEASNLLR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHCCHHHHHHHCCCCHHHHHH
VTLQDLDAMGGVLDDVLAAGANEFRGLTFTYSEREAAENLLRTMAYENAYRKAQQLAEAS
HHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMALGPVRDIRDGGASGGAPMMAMEMARSSDMPISPGALSLRHSVTVTFDISVPDGPN
CCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCCCC
>Mature Secondary Structure
MLKSKTAALMLASAVALTPLSLGAEELRQIHVTGEATSEVTPDRAHITLGVRVEAKDAGA
CCCCHHHHHHHHHHHHHHHHHCCHHHHHEEEECCCCCCCCCCCCEEEEEEEEEECCHHHH
AMEQVSQRMQEVTARLGDSGIAAQDMQTEQVSLHPVWNQVTRDGDQMREVTGFEASNLLR
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHCCHHHHHHHCCCCHHHHHH
VTLQDLDAMGGVLDDVLAAGANEFRGLTFTYSEREAAENLLRTMAYENAYRKAQQLAEAS
HHHHHHHHHHHHHHHHHHCCCHHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GMALGPVRDIRDGGASGGAPMMAMEMARSSDMPISPGALSLRHSVTVTFDISVPDGPN
CCCCCCHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEEEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12542086 [H]