The gene/protein map for NC_008044 is currently unavailable.
Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080424

Identifier: 99080424

GI number: 99080424

Start: 621175

End: 623808

Strand: Reverse

Name: 99080424

Synonym: TM1040_0583

Alternate gene names: NA

Gene position: 623808-621175 (Counterclockwise)

Preceding gene: 99080426

Following gene: 99080422

Centisome position: 19.49

GC content: 64.16

Gene sequence:

>2634_bases
ATGAAACCAGAGTTCGCGCTCTCTCTTTCGTTTGATGGCATAACCGTGCTGACCCGTGGCGCGGGAGGATGGTATCGTTT
GGGGTCGGTCTCGCCTGACGCCAAAGATCTGCCAGAGCAGCTTGCAAAGCTGCGCGCAGAGGCGCTGGCCCTCTCCGAAG
CGCCGCTCCATGCAAAGCTGGTATTGCCGGACAGCCAAATCCGCTACCTGAGCCTTGAGACGGGCGAGTTGTCCCATGAT
GCGCGCATCAGTGCGGCACGCGCCGCACTTGAGGGCGCCACCCCCTACAAGGTGGATGAACTCGCCTTTGACATCAGCGT
TGATGGTGCAATCACCCATGTGGCGGCAGTTGCGCTTGTCACTCTGGACGAGGCCGAGAGTTTTGCAACCGAGCATGGAT
TTGCGCCGGTGAGCTTCGTGGCCGCACCCGAAGATGCCGCCTATCTCGGCGAGCCTTTCTTTGGCACTGCACGCTCTGCG
CGTCATCTCACGGTCGAGCCCGACGGCATTGCCGTCGTCGAAGTGCCGCCGCCGGCTGATCCCGCAGTTGCGAAGGGCGA
TACCGCAGAGGAGCCCGATCTCTATCCCGAGAGTGCGGCAGATGATGATCTCGCACCGCGCAGCGATGCCCCGATCATCT
TGCCCGCTGCGCCACCAGTCCTTGATGCTTCACCAGAAGAGGCTGCGCCGTCTACCGACGATAGCACCGACACCAAACTC
GCTGACACCGAGGACGAGACCGCTGCGCAGAGCGCCGAGAGCACTTCCGCGGAAGAGCCCGAGGACATCGGTCCGGCGGT
TGGTTTCAGTTCCCGCCGCAGCCGTGCGAAGCTTGAAGTAACCAGCACAAAGACCACTGCGCCCAAAGCGCCTTCTGTGA
CTCCCAAGTCAGCAGGCACTTCAGAACCCGCTGCACCCAAAGCGCCAAGTGCCACGACCGCAAAAACCGGCGTGGCCCTT
GCGACCTCGTCGGTACCTGCCGCCCCGAGCCTCGCCTTGCCGACGCCTGTTCTGGCCCACACGACCTCGGCGCCGCCAAA
GCCGAGCCCGAGCGCAATCGCGCAACCGGTCTCGGGGCCTGCGCCGGAGCAGCTGCAAACACCGCAAGCGCGGCCCATGC
GGGCGCGCTCTGGTCGGATCGGCCTTTTGGCCGCAGGTCTTGCTGCGGTTTCGGCCATTGGGGCCTGGGCCGTCGTTCAG
GAGTTGCCAAATCTCTGGTCAGACCTCAAGCGCGCCGACCTGATTGAGACCGAGGACCCGGTCGCCACACCGGTTCTGGC
CGCCCCTGATGCGGCTCTGGATGCCAACAAGGAGCTGACCACAACCGCACAAGGCGGTCTGGGTCTCAACCTGCCCTCCG
CGCCAGCGCGCACAGTCGCGACAGGGGCAGAGACGGGTCCAGCGCCCGGCGAGCTGGCTGCTGACACGCTGACCGAGACC
GACGCTGCTGTCCTCGAAGCGCTCGGCGCCCCCGTGGTCGATGAAGCCGCCCCGTTGGACGGGCAGGATCTGATCATTGC
CTCCCTGCCCGCGCCGCAAGACATCACGTCTGGGACTTCTGAAACGGCCCTCGCCCCCATCGACGATGAGGCAGCGGTCT
TTGACGACAGCGCCGAGATCGACCCGGAGGCGCTCGCGGATGGGGTCGTGCCAGAGGATCAACCAACAGATTTGCTCCAG
GAGGCCCCGTCGGAGCTTGAACAGGCTGCACAGTATGCCGCCACCGGGATCTGGCAACAGGTTCCCGACATTGCAGACGT
GCCCGCGCTGATCAGCCTCGACAACGTCTATGTGGCCTCCATCGATAATACCGAATTGTCCCAGGATGCAATTGCCCTGC
CTGCGCCCGACGCATTCGAGACAGACACGCCCTTTGGTGCGGTCTCAAGCCCCACAGAAGCCGGACGCCAGTTCGACTTT
GATGACCGGGGATTGGTCGTGGCGAGCCCGGATGGCACCCTCAATCCCGACGGGATCATGATCTATGCCGGTCGCCCGGT
CAAAGTGCCGCCACCCACGCCAGATAGGCCCACGGAACGCGTGTTGGCCGCTGCAGAAGAAGCAGAGCGCCTCGCGTTGT
TGCAACAAGTCCGCCCCCGTACGCGCCCCAACGACCTGGTAGAACAGGCTGAGCGCGCGCAATTGGGTGGCGTGGTGCGC
TCTGAACTTCTGTCAAAGCGCCCAAAGCTGCGGCCTGACAGCCTCAAGACAGAAGCACAGGAAAGCCAGCCTGCTACGGC
TTTGGCCGTGGCGAGCGCCCCGCAGCCACGGGCACGCCCGACCAATTTTGCAAATATCGTGGACCGCGCCCAGCGTCGCC
AGCAACAGGCGCCCGATCAAAGCTCCAGCGCAACCGTTGCGTCTGCAGCGGTGACACCGGCCATCCCGTCTTCGGCGTCG
GTTGCCCGCCAGGCGACCACCCAGCGGGCGCTCAACCTGCGGCGTCTCAATCTCATTGGCGTCTATGGCAAGCCTTCCGA
CCGGCGCGCCTTGGTGCGCCTGCCGTCTGGCCGCTATGTGAAAGTCAAAGTGGGCGACCGCATCGACGGCGGTCGAATCG
TCGCGATCGGTGACAGCCAGTTGCAGTATCAAAAAGGCAGTCGGAACACGGTACTCAACCTGCCAAACGGCTGA

Upstream 100 bases:

>100_bases
GCTTTAGGGTAGGTCGTGAATGGTTTTCGCGAATGTCCCCTCACCGAGGGATCTTGGCGCCACAGGATGAGGCGCGCAGA
CAAAAGACCCTGATGACCTG

Downstream 100 bases:

>100_bases
TATTCCGGCGCACCACTTGAGGGCGCAACGTTCCTGAAGTGAACGCAAAAGCCGGGCAAATTGCCCGGCTTTCTCTTTTG
TATTCAAGGGGCGGCGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 877; Mature: 877

Protein sequence:

>877_residues
MKPEFALSLSFDGITVLTRGAGGWYRLGSVSPDAKDLPEQLAKLRAEALALSEAPLHAKLVLPDSQIRYLSLETGELSHD
ARISAARAALEGATPYKVDELAFDISVDGAITHVAAVALVTLDEAESFATEHGFAPVSFVAAPEDAAYLGEPFFGTARSA
RHLTVEPDGIAVVEVPPPADPAVAKGDTAEEPDLYPESAADDDLAPRSDAPIILPAAPPVLDASPEEAAPSTDDSTDTKL
ADTEDETAAQSAESTSAEEPEDIGPAVGFSSRRSRAKLEVTSTKTTAPKAPSVTPKSAGTSEPAAPKAPSATTAKTGVAL
ATSSVPAAPSLALPTPVLAHTTSAPPKPSPSAIAQPVSGPAPEQLQTPQARPMRARSGRIGLLAAGLAAVSAIGAWAVVQ
ELPNLWSDLKRADLIETEDPVATPVLAAPDAALDANKELTTTAQGGLGLNLPSAPARTVATGAETGPAPGELAADTLTET
DAAVLEALGAPVVDEAAPLDGQDLIIASLPAPQDITSGTSETALAPIDDEAAVFDDSAEIDPEALADGVVPEDQPTDLLQ
EAPSELEQAAQYAATGIWQQVPDIADVPALISLDNVYVASIDNTELSQDAIALPAPDAFETDTPFGAVSSPTEAGRQFDF
DDRGLVVASPDGTLNPDGIMIYAGRPVKVPPPTPDRPTERVLAAAEEAERLALLQQVRPRTRPNDLVEQAERAQLGGVVR
SELLSKRPKLRPDSLKTEAQESQPATALAVASAPQPRARPTNFANIVDRAQRRQQQAPDQSSSATVASAAVTPAIPSSAS
VARQATTQRALNLRRLNLIGVYGKPSDRRALVRLPSGRYVKVKVGDRIDGGRIVAIGDSQLQYQKGSRNTVLNLPNG

Sequences:

>Translated_877_residues
MKPEFALSLSFDGITVLTRGAGGWYRLGSVSPDAKDLPEQLAKLRAEALALSEAPLHAKLVLPDSQIRYLSLETGELSHD
ARISAARAALEGATPYKVDELAFDISVDGAITHVAAVALVTLDEAESFATEHGFAPVSFVAAPEDAAYLGEPFFGTARSA
RHLTVEPDGIAVVEVPPPADPAVAKGDTAEEPDLYPESAADDDLAPRSDAPIILPAAPPVLDASPEEAAPSTDDSTDTKL
ADTEDETAAQSAESTSAEEPEDIGPAVGFSSRRSRAKLEVTSTKTTAPKAPSVTPKSAGTSEPAAPKAPSATTAKTGVAL
ATSSVPAAPSLALPTPVLAHTTSAPPKPSPSAIAQPVSGPAPEQLQTPQARPMRARSGRIGLLAAGLAAVSAIGAWAVVQ
ELPNLWSDLKRADLIETEDPVATPVLAAPDAALDANKELTTTAQGGLGLNLPSAPARTVATGAETGPAPGELAADTLTET
DAAVLEALGAPVVDEAAPLDGQDLIIASLPAPQDITSGTSETALAPIDDEAAVFDDSAEIDPEALADGVVPEDQPTDLLQ
EAPSELEQAAQYAATGIWQQVPDIADVPALISLDNVYVASIDNTELSQDAIALPAPDAFETDTPFGAVSSPTEAGRQFDF
DDRGLVVASPDGTLNPDGIMIYAGRPVKVPPPTPDRPTERVLAAAEEAERLALLQQVRPRTRPNDLVEQAERAQLGGVVR
SELLSKRPKLRPDSLKTEAQESQPATALAVASAPQPRARPTNFANIVDRAQRRQQQAPDQSSSATVASAAVTPAIPSSAS
VARQATTQRALNLRRLNLIGVYGKPSDRRALVRLPSGRYVKVKVGDRIDGGRIVAIGDSQLQYQKGSRNTVLNLPNG
>Mature_877_residues
MKPEFALSLSFDGITVLTRGAGGWYRLGSVSPDAKDLPEQLAKLRAEALALSEAPLHAKLVLPDSQIRYLSLETGELSHD
ARISAARAALEGATPYKVDELAFDISVDGAITHVAAVALVTLDEAESFATEHGFAPVSFVAAPEDAAYLGEPFFGTARSA
RHLTVEPDGIAVVEVPPPADPAVAKGDTAEEPDLYPESAADDDLAPRSDAPIILPAAPPVLDASPEEAAPSTDDSTDTKL
ADTEDETAAQSAESTSAEEPEDIGPAVGFSSRRSRAKLEVTSTKTTAPKAPSVTPKSAGTSEPAAPKAPSATTAKTGVAL
ATSSVPAAPSLALPTPVLAHTTSAPPKPSPSAIAQPVSGPAPEQLQTPQARPMRARSGRIGLLAAGLAAVSAIGAWAVVQ
ELPNLWSDLKRADLIETEDPVATPVLAAPDAALDANKELTTTAQGGLGLNLPSAPARTVATGAETGPAPGELAADTLTET
DAAVLEALGAPVVDEAAPLDGQDLIIASLPAPQDITSGTSETALAPIDDEAAVFDDSAEIDPEALADGVVPEDQPTDLLQ
EAPSELEQAAQYAATGIWQQVPDIADVPALISLDNVYVASIDNTELSQDAIALPAPDAFETDTPFGAVSSPTEAGRQFDF
DDRGLVVASPDGTLNPDGIMIYAGRPVKVPPPTPDRPTERVLAAAEEAERLALLQQVRPRTRPNDLVEQAERAQLGGVVR
SELLSKRPKLRPDSLKTEAQESQPATALAVASAPQPRARPTNFANIVDRAQRRQQQAPDQSSSATVASAAVTPAIPSSAS
VARQATTQRALNLRRLNLIGVYGKPSDRRALVRLPSGRYVKVKVGDRIDGGRIVAIGDSQLQYQKGSRNTVLNLPNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 90858; Mature: 90858

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPEFALSLSFDGITVLTRGAGGWYRLGSVSPDAKDLPEQLAKLRAEALALSEAPLHAKL
CCCCEEEEEECCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
VLPDSQIRYLSLETGELSHDARISAARAALEGATPYKVDELAFDISVDGAITHVAAVALV
ECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHEEEEEECCHHHHHHHHHHHH
TLDEAESFATEHGFAPVSFVAAPEDAAYLGEPFFGTARSARHLTVEPDGIAVVEVPPPAD
HHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
PAVAKGDTAEEPDLYPESAADDDLAPRSDAPIILPAAPPVLDASPEEAAPSTDDSTDTKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCEE
ADTEDETAAQSAESTSAEEPEDIGPAVGFSSRRSRAKLEVTSTKTTAPKAPSVTPKSAGT
CCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
SEPAAPKAPSATTAKTGVALATSSVPAAPSLALPTPVLAHTTSAPPKPSPSAIAQPVSGP
CCCCCCCCCCCCCHHCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCC
APEQLQTPQARPMRARSGRIGLLAAGLAAVSAIGAWAVVQELPNLWSDLKRADLIETEDP
CCHHHCCCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VATPVLAAPDAALDANKELTTTAQGGLGLNLPSAPARTVATGAETGPAPGELAADTLTET
CCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
DAAVLEALGAPVVDEAAPLDGQDLIIASLPAPQDITSGTSETALAPIDDEAAVFDDSAEI
HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCEECCCCCCCCEECCCCCC
DPEALADGVVPEDQPTDLLQEAPSELEQAAQYAATGIWQQVPDIADVPALISLDNVYVAS
CHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCEEEEE
IDNTELSQDAIALPAPDAFETDTPFGAVSSPTEAGRQFDFDDRGLVVASPDGTLNPDGIM
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCEE
IYAGRPVKVPPPTPDRPTERVLAAAEEAERLALLQQVRPRTRPNDLVEQAERAQLGGVVR
EECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SELLSKRPKLRPDSLKTEAQESQPATALAVASAPQPRARPTNFANIVDRAQRRQQQAPDQ
HHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
SSSATVASAAVTPAIPSSASVARQATTQRALNLRRLNLIGVYGKPSDRRALVRLPSGRYV
CCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEECCCCCEE
KVKVGDRIDGGRIVAIGDSQLQYQKGSRNTVLNLPNG
EEEECCCCCCCEEEEECCCCEEECCCCCCEEEECCCC
>Mature Secondary Structure
MKPEFALSLSFDGITVLTRGAGGWYRLGSVSPDAKDLPEQLAKLRAEALALSEAPLHAKL
CCCCEEEEEECCCEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEE
VLPDSQIRYLSLETGELSHDARISAARAALEGATPYKVDELAFDISVDGAITHVAAVALV
ECCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCHHHEEEEEECCHHHHHHHHHHHH
TLDEAESFATEHGFAPVSFVAAPEDAAYLGEPFFGTARSARHLTVEPDGIAVVEVPPPAD
HHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCCCCCCCCCEEEECCCCEEEEECCCCCC
PAVAKGDTAEEPDLYPESAADDDLAPRSDAPIILPAAPPVLDASPEEAAPSTDDSTDTKL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCCCCCCCCCCEE
ADTEDETAAQSAESTSAEEPEDIGPAVGFSSRRSRAKLEVTSTKTTAPKAPSVTPKSAGT
CCCCHHHHHHHHHCCCCCCCHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC
SEPAAPKAPSATTAKTGVALATSSVPAAPSLALPTPVLAHTTSAPPKPSPSAIAQPVSGP
CCCCCCCCCCCCCHHCCEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHCCCCCC
APEQLQTPQARPMRARSGRIGLLAAGLAAVSAIGAWAVVQELPNLWSDLKRADLIETEDP
CCHHHCCCCCCCCHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VATPVLAAPDAALDANKELTTTAQGGLGLNLPSAPARTVATGAETGPAPGELAADTLTET
CCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHH
DAAVLEALGAPVVDEAAPLDGQDLIIASLPAPQDITSGTSETALAPIDDEAAVFDDSAEI
HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCHHCCCCCCCEECCCCCCCCEECCCCCC
DPEALADGVVPEDQPTDLLQEAPSELEQAAQYAATGIWQQVPDIADVPALISLDNVYVAS
CHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCEEEEE
IDNTELSQDAIALPAPDAFETDTPFGAVSSPTEAGRQFDFDDRGLVVASPDGTLNPDGIM
CCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEEECCCCCCCCCCEE
IYAGRPVKVPPPTPDRPTERVLAAAEEAERLALLQQVRPRTRPNDLVEQAERAQLGGVVR
EECCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
SELLSKRPKLRPDSLKTEAQESQPATALAVASAPQPRARPTNFANIVDRAQRRQQQAPDQ
HHHHHCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCC
SSSATVASAAVTPAIPSSASVARQATTQRALNLRRLNLIGVYGKPSDRRALVRLPSGRYV
CCCCEEHHHHCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEEECCCCCCEEEEECCCCCEE
KVKVGDRIDGGRIVAIGDSQLQYQKGSRNTVLNLPNG
EEEECCCCCCCEEEEECCCCEEECCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA