| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
Click here to switch to the map view.
The map label for this gene is 99080408
Identifier: 99080408
GI number: 99080408
Start: 603693
End: 604196
Strand: Reverse
Name: 99080408
Synonym: TM1040_0567
Alternate gene names: NA
Gene position: 604196-603693 (Counterclockwise)
Preceding gene: 99080409
Following gene: 99080405
Centisome position: 18.88
GC content: 59.92
Gene sequence:
>504_bases ATGACCTCTCCCCGTCCGCAAAACACGGCTTCACCATCGCTCCTGCCGCTTTCGCGTTCGGACCATGATCTGGTCCGAGA TATTGCCGTCGCGCCCGAACAAGTGGTCTATTGTGGCACAATCGCCATGGCCTTCGCCTCTGATGAGGCTGGCGTGGATT TCTATGCCATCCAGCAGGCAGGACGATTTGTCGGCTTTTTCAAGATCGACGTGAAATACCCCCGAACCTACAATTTCGCG CGCCAGGGCGATCTCGGTCTCAGGGCCTTTATGATCGATCATCGCGTGCAAGGCAGTGGCATCGGCAGCGGAGCCTTGCG CGTGCTGCCATCGCTGTTGCGCCGAACCTACCCAAAGGCTCAGGCGCTGGTCTTGACGGTGAACATGCGCAACCACGCAG CGCTGCGCACCTACCTGAACTGCGGCTTCAGGGACACCGGCGACATCCACGACGGCGGGATCGCTGGGCCGCAACATGTG ATGCGCTTGCCGCTCTTTGACTGA
Upstream 100 bases:
>100_bases CTCAGACTCGAATGTCGAGACGCTTCGGGTCGTGCTGAATGATGACGCGAGACATGACCTCAGCCTCGACGCGCTGTGGG ACGTCCTGACATTTGGCTGA
Downstream 100 bases:
>100_bases GGCTCACTTGAGCTGGCTGTCTTTGCTGCCGCGACGATTGATGCCGCCGCGCTGACGCTGCACACCGTCGCGCTCCTCTT GGCAGTCGATACAGAGTTTC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: Acetyltransferase GNAT Family; Histone Acetyltransferase HPA2-Like Acetyltransferase; Acetyltransferase; GCN5-Like N-Acetyltransferase
Number of amino acids: Translated: 167; Mature: 166
Protein sequence:
>167_residues MTSPRPQNTASPSLLPLSRSDHDLVRDIAVAPEQVVYCGTIAMAFASDEAGVDFYAIQQAGRFVGFFKIDVKYPRTYNFA RQGDLGLRAFMIDHRVQGSGIGSGALRVLPSLLRRTYPKAQALVLTVNMRNHAALRTYLNCGFRDTGDIHDGGIAGPQHV MRLPLFD
Sequences:
>Translated_167_residues MTSPRPQNTASPSLLPLSRSDHDLVRDIAVAPEQVVYCGTIAMAFASDEAGVDFYAIQQAGRFVGFFKIDVKYPRTYNFA RQGDLGLRAFMIDHRVQGSGIGSGALRVLPSLLRRTYPKAQALVLTVNMRNHAALRTYLNCGFRDTGDIHDGGIAGPQHV MRLPLFD >Mature_166_residues TSPRPQNTASPSLLPLSRSDHDLVRDIAVAPEQVVYCGTIAMAFASDEAGVDFYAIQQAGRFVGFFKIDVKYPRTYNFAR QGDLGLRAFMIDHRVQGSGIGSGALRVLPSLLRRTYPKAQALVLTVNMRNHAALRTYLNCGFRDTGDIHDGGIAGPQHVM RLPLFD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18365; Mature: 18234
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPRPQNTASPSLLPLSRSDHDLVRDIAVAPEQVVYCGTIAMAFASDEAGVDFYAIQQA CCCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEHHEEEEEECCCCCCCCEEECCC GRFVGFFKIDVKYPRTYNFARQGDLGLRAFMIDHRVQGSGIGSGALRVLPSLLRRTYPKA CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECEECCCCCCCHHHHHHHHHHHHCCCCC QALVLTVNMRNHAALRTYLNCGFRDTGDIHDGGIAGPQHVMRLPLFD EEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCC >Mature Secondary Structure TSPRPQNTASPSLLPLSRSDHDLVRDIAVAPEQVVYCGTIAMAFASDEAGVDFYAIQQA CCCCCCCCCCCCEEECCCCCHHHHHHHHCCCCCEEEEHHEEEEEECCCCCCCCEEECCC GRFVGFFKIDVKYPRTYNFARQGDLGLRAFMIDHRVQGSGIGSGALRVLPSLLRRTYPKA CCEEEEEEEEEECCCCCCCCCCCCCCEEEEEEECEECCCCCCCHHHHHHHHHHHHCCCCC QALVLTVNMRNHAALRTYLNCGFRDTGDIHDGGIAGPQHVMRLPLFD EEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA