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The map label for this gene is 99080371

Identifier: 99080371

GI number: 99080371

Start: 558345

End: 559640

Strand: Reverse

Name: 99080371

Synonym: TM1040_0530

Alternate gene names: NA

Gene position: 559640-558345 (Counterclockwise)

Preceding gene: 99080372

Following gene: 99080370

Centisome position: 17.48

GC content: 62.81

Gene sequence:

>1296_bases
ATGGCTCTGGCACGACGCATTTCTGCCGTTGCACTTTTGTGCAGCCTGACGGCGTGTGGTCTGCCACTCCCCGGCACCCT
GTCGGGTACGCAAGACAGCACCGCGGGGCGCAGCAATTTCGCGCAGGCCGAAGACGCGCCCCAATCGGAAGTGATCACGG
CGCTGATGCAGCGCCAATCCCTGCTGCAGGGTGGCACCGCATATGACACGGTGGCCTCTGCGGCGCTCTCGGCATCTGCC
CGGGCGTCCGAAGCTGCGCTGATCAGTGCCAAGCTGCGTGCAGAGGCAAAATCGACGAACTGGCTGCCGTCGCTGCGGCC
AACCGTCAGCCTGAACGATCTCGGCGAGATGGTGGCCAGCATGCTCCTCGAGCAGGTTCTTTTCGACAACGGACGTCGCA
AGGCCGAGCGCGCCTTTGCCGCCGCGGACGTCGAAGTGGCTGCCGTGACCCTCTCGGCAGATATGAACGACCGCGTCAAA
ACCGCGCTCTCGCTTTATGTATCCGGTTTGCGCGGCGATGAGAAAGCCGCCTACGCCCACCGCGCCATCCGTACCATGCG
CGACTTTGAACGCGTGGTTGTAGGGCGGGTGAATGGTGGCGTTTCAGACCGCTCCGACCTCAATGTGGTGCAATCCAAAA
TCAGTGGCATGCAATCGAGCATGGCCACAGCCAATGATGCCGCACGCACCGCCCGTGCAGAGCTTCAAGCCATGACGGGG
CAGAGTTTTCCAGCCTCGCCCCAACGCCTGAGCCTAGATCTGCCACCGGATGGCAGCAACTATCTAAGCGTCCTCAAAGC
CAAGTCGGAGGCCACCCGCGCCATTGAACAGGCCAAGATGGAACGCGCCGGCCTGCTGCCGCAGGTCTCGGCCAGCGGAC
AGGTCGGCAGCGAGGGCAATGGCGCCGGCGTTTTGCTGAACCTTGCCGAACCTCTCGGACTGGGCACGCCAGCCGCCCTG
CGCGCGGTCGAGGCCTCCAAACAAGCGGCCTTGCGCCGGATTGGTGAGGCAGAAGAAGATGCCCGCCGTGAATACAGCCG
CGAGATGCAACGTCTTGCGTCCTATCGCCGCCAGGAGCGCGAGGCCTTGGCCCTGTCACGCGCCAGCCGCGAGACCTACA
ACCTGTTCAAAGCCCAGTTCGAGGCCGGTCAAAGACCGGTGATGGACGTGATCCCGATCTACGAGGAACTGGTGAAACGC
GAGCAGGCCTATATCGACGCGAAATATGAAGTGGTCATGATCCAACTGGCACTCGCCGCCTCTCTGGGTCTGCTTGCAGA
TGGGGACAAGATTTGA

Upstream 100 bases:

>100_bases
CGCGCAGCCCCTTGCTGCCTCTTCAGGCAAGGCTACGGGCTGCGCGCACGCAATAACCCACGGACAAACCGCGGGACAGT
TTGAGGCACGAGGGATTTCT

Downstream 100 bases:

>100_bases
CGGATCAGGACTCGCATACGCCCGCACCCCCCGCCTCCAAGCCCGCAAAACGTGGGCTGAAGCTGTCTTCGATCACGCCC
AACCTGACCCGCAAACGACG

Product: outer membrane efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 430

Protein sequence:

>431_residues
MALARRISAVALLCSLTACGLPLPGTLSGTQDSTAGRSNFAQAEDAPQSEVITALMQRQSLLQGGTAYDTVASAALSASA
RASEAALISAKLRAEAKSTNWLPSLRPTVSLNDLGEMVASMLLEQVLFDNGRRKAERAFAAADVEVAAVTLSADMNDRVK
TALSLYVSGLRGDEKAAYAHRAIRTMRDFERVVVGRVNGGVSDRSDLNVVQSKISGMQSSMATANDAARTARAELQAMTG
QSFPASPQRLSLDLPPDGSNYLSVLKAKSEATRAIEQAKMERAGLLPQVSASGQVGSEGNGAGVLLNLAEPLGLGTPAAL
RAVEASKQAALRRIGEAEEDARREYSREMQRLASYRRQEREALALSRASRETYNLFKAQFEAGQRPVMDVIPIYEELVKR
EQAYIDAKYEVVMIQLALAASLGLLADGDKI

Sequences:

>Translated_431_residues
MALARRISAVALLCSLTACGLPLPGTLSGTQDSTAGRSNFAQAEDAPQSEVITALMQRQSLLQGGTAYDTVASAALSASA
RASEAALISAKLRAEAKSTNWLPSLRPTVSLNDLGEMVASMLLEQVLFDNGRRKAERAFAAADVEVAAVTLSADMNDRVK
TALSLYVSGLRGDEKAAYAHRAIRTMRDFERVVVGRVNGGVSDRSDLNVVQSKISGMQSSMATANDAARTARAELQAMTG
QSFPASPQRLSLDLPPDGSNYLSVLKAKSEATRAIEQAKMERAGLLPQVSASGQVGSEGNGAGVLLNLAEPLGLGTPAAL
RAVEASKQAALRRIGEAEEDARREYSREMQRLASYRRQEREALALSRASRETYNLFKAQFEAGQRPVMDVIPIYEELVKR
EQAYIDAKYEVVMIQLALAASLGLLADGDKI
>Mature_430_residues
ALARRISAVALLCSLTACGLPLPGTLSGTQDSTAGRSNFAQAEDAPQSEVITALMQRQSLLQGGTAYDTVASAALSASAR
ASEAALISAKLRAEAKSTNWLPSLRPTVSLNDLGEMVASMLLEQVLFDNGRRKAERAFAAADVEVAAVTLSADMNDRVKT
ALSLYVSGLRGDEKAAYAHRAIRTMRDFERVVVGRVNGGVSDRSDLNVVQSKISGMQSSMATANDAARTARAELQAMTGQ
SFPASPQRLSLDLPPDGSNYLSVLKAKSEATRAIEQAKMERAGLLPQVSASGQVGSEGNGAGVLLNLAEPLGLGTPAALR
AVEASKQAALRRIGEAEEDARREYSREMQRLASYRRQEREALALSRASRETYNLFKAQFEAGQRPVMDVIPIYEELVKRE
QAYIDAKYEVVMIQLALAASLGLLADGDKI

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46022; Mature: 45891

Theoretical pI: Translated: 8.15; Mature: 8.15

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARRISAVALLCSLTACGLPLPGTLSGTQDSTAGRSNFAQAEDAPQSEVITALMQRQS
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LLQGGTAYDTVASAALSASARASEAALISAKLRAEAKSTNWLPSLRPTVSLNDLGEMVAS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
MLLEQVLFDNGRRKAERAFAAADVEVAAVTLSADMNDRVKTALSLYVSGLRGDEKAAYAH
HHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHH
RAIRTMRDFERVVVGRVNGGVSDRSDLNVVQSKISGMQSSMATANDAARTARAELQAMTG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QSFPASPQRLSLDLPPDGSNYLSVLKAKSEATRAIEQAKMERAGLLPQVSASGQVGSEGN
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GAGVLLNLAEPLGLGTPAALRAVEASKQAALRRIGEAEEDARREYSREMQRLASYRRQER
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EALALSRASRETYNLFKAQFEAGQRPVMDVIPIYEELVKREQAYIDAKYEVVMIQLALAA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLGLLADGDKI
HHCCCCCCCCC
>Mature Secondary Structure 
ALARRISAVALLCSLTACGLPLPGTLSGTQDSTAGRSNFAQAEDAPQSEVITALMQRQS
CHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LLQGGTAYDTVASAALSASARASEAALISAKLRAEAKSTNWLPSLRPTVSLNDLGEMVAS
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHH
MLLEQVLFDNGRRKAERAFAAADVEVAAVTLSADMNDRVKTALSLYVSGLRGDEKAAYAH
HHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHH
RAIRTMRDFERVVVGRVNGGVSDRSDLNVVQSKISGMQSSMATANDAARTARAELQAMTG
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
QSFPASPQRLSLDLPPDGSNYLSVLKAKSEATRAIEQAKMERAGLLPQVSASGQVGSEGN
CCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
GAGVLLNLAEPLGLGTPAALRAVEASKQAALRRIGEAEEDARREYSREMQRLASYRRQER
CCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
EALALSRASRETYNLFKAQFEAGQRPVMDVIPIYEELVKREQAYIDAKYEVVMIQLALAA
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
SLGLLADGDKI
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA