| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is apxIB [H]
Identifier: 99080370
GI number: 99080370
Start: 555733
End: 558348
Strand: Reverse
Name: apxIB [H]
Synonym: TM1040_0529
Alternate gene names: 99080370
Gene position: 558348-555733 (Counterclockwise)
Preceding gene: 99080371
Following gene: 99080369
Centisome position: 17.44
GC content: 63.19
Gene sequence:
>2616_bases TTGACGGATCAGGACTCGCATACGCCCGCACCCCCCGCCTCCAAGCCCGCAAAACGTGGGCTGAAGCTGTCTTCGATCAC GCCCAACCTGACCCGCAAACGACGCGGAGACGCTGCGAACCAGACCGAGGGGCCGGTCAAGATCTCCATGGTCGCGCCGA CAGCGAACCCAAAGCCCGCAAACGCCGAAGCCAAGTTGGATGCGCGGCTCTCTGTCCCTAAGTTTCTGCAACGCAAAGCA AAGCCCGCAGCAGCCGAGACACCCGCCGCCCCCCAAACGCAAGCCCCCCCTGCCGTAGATCCAATTGAGATCGAATCCTT CGTGGCGCCCCGCCCTGCCGCAACAAAGCCGGACGCCGCGCCGGCAACAGAGCCACTGGCCACTTTCGAACCCGAAGAGG ATCCACAGAACGCCGAAGCAGCGGATCAAGACCAGATGCGCCCGGAGCCCGCGCCGCAAACGGCTCGCGAGACCGAAGCT GCCTCTGCGTCCATGGTCGCGGCGGAAGACACGTTGGGACGCCTCAAAGCACGGGCACAGCTGCTCTGTCGCCTTGCAGC TTTGCGGGGCTGCACGCTTCACGCACAGGATATGCTCGAGCATCTTCAGGCCAGCGGTCCCGCAGCCCTGCGCCCCGAAG CCATGATGAGCGCGCTGATCACCGCTGGCCTCAAGGCCCGCGTGCAAAGCGTGAAACGCCCCACACCCCGGCACTGGCCG GGCATCGCCATCATGCAGGGCGGACAGCCCGTTCTGGTGCTCTCTCAGGGCAAGGCTGGCGTTACCATTTACGACAGCTC CTGCCCCGATGGGCGCGCCGAAGTGCCAATGCAGGAGTTCATGCCCTATTATGCGGGCCAGATCCTCACGACACGCGCGA CCCTGTCGCAACTGACGCAGCGCCATACGCCTCAGCTGGATACCTCGCATTGGTTCTGGGGAGAATTCCCCAAGTATCGC AGACAGATGGGCGAGATCATGCTGGGCTCTCTGGTTGCCAATGTACTCGCGGTTGCGGTGGCATTGTTCTCCCTCCAGGT CTATGACCGCGTGGTGCCCCATCAGTCGCAGGCGACCCTCTGGGTGCTCGCCGTCGGGGCTCTCATGGCGATCGGGATGG AAGGCATCCTGAAGCTGGCACGTGCCCGGATCACCGATGCGGCAGGCCGCCAAATCGATATGGCCGTGCAGCACAAGCTG ATGCGTCGGGTGATCGGCCTCAAGATGGATCAGAGCCCCCTGCCCCCGTCGGGTCTCTTTGCAGCGCTGCGAGATTTTGC CTCGGTGCGCGAGTTCTTTACTTCCTCAACCCTGTCGACCCTGGCCGACGTGCCCTTCATCGCGGTGTTCCTCTTGCTGG TCGCCTCGATTGGTGGGCCGGTCGTCTATGTCATCCTGATCGGCGCCGTCCTGATGCTGTTGCCCGCCTACTTCATCCAG AAAAAGATGCTGGCGATGACACGACTGGCGCAAGGTGCCTCCACCAAGAGCGGGCGGCTGCTGAATGAGGTGGTCAATGA GATGGAGACCATCAAGACCCAACGTGGCGAGGAACGTGTTCTGCGGCTCTGGGATGAGCTGAACCTCCTGTCCTCTCAGG CCTCCAACGGCCAGCGCAAACTCGCAAGTGCGCTCACCTACTGGTCGCAGGGGGTGCAGCAGGCAACCTATATTTGTGCT GTAATTCTGGGGACTTATATGGTGTTCGCCGGTGAGTTCACGGTCGGCACCATCATCGCAACAGGTATCCTGACAAGCCG CACACTCGCTCCGCTCACGCAGTTTGCAGGCACGCTGGCGCGCTGGAGCAATGTGCGTGCGGCGCTGGATGCGCTTGATA TGATCGCAGACGCCCCGCAGGAGCGCGAAAAGGGCCGCGCCTACCTGCGCCGCGAGAGCATCGAAGGCCGTTTTGAGCTG CGCGAAGTCGTATTTCGCTATGACCCTGATGCAGCGCCGACAGTAGATGTTCCAGCGGTTGCGGTGCTCCCCGGTCAGCG CGTTGCCATTCTTGGCGTCAACGGGTCCGGGAAATCGACGCTCCTGAAGCTGCTCGCCGGGCTTTACACCCCCGAACGTG GGCGCGTGATGCTGGACGGCACCGATATGAGCCAGATCGAGCCGCGCGACCTGCGGCGCCACATCGGCTATCTCGGCCAG GAGGTGCGCCTCTTTGCAGGCACGCTGCGCGACAACCTGAACCTCTCCTATCTGCCTCATGAAGACGAGCGAATCATGGA GGCGCTTGAGTTTGCAGGGCTTGCGGCATTCGTGCGGGGACACCCGCGCGGGCTCGACCTTGAAATCGGTGACGGAGGCG CGGGCCTGTCAATCGGTCAGCGTCAAGCTGTGGGATGGGCGCGCCTGCACTTGCAGAACCCGTCGGTCGTGCTTTTGGAC GAACCCACCGCGGCGCTCGATCAGACGCTTGAACGCACGCTGGTGAGCCGTCTGGACAGCTGGCTCGGGACGCGCACTGC CATTGTTGCAACGCACCGTATGCCGATCCTGTCGCTCACCAACCGCACCTTGATCCTGCAGGCCGGGCGCATGGTTGTGG ACGGGCCACGCGACGAGGTGTTGGCGCATCTGAACGGGGGGAGCAAAGCCTCATGA
Upstream 100 bases:
>100_bases TGAAACGCGAGCAGGCCTATATCGACGCGAAATATGAAGTGGTCATGATCCAACTGGCACTCGCCGCCTCTCTGGGTCTG CTTGCAGATGGGGACAAGAT
Downstream 100 bases:
>100_bases GCATCGCAGCAGACATGGACATCCTTGAAGGCACCCATGGCGCCAGCCGCATGATCAAGCTGGTGGCGCTGGTGCTCGTT ATGTTTGTCACCTGGGCCGG
Product: ABC transporter related
Products: NA
Alternate protein names: APX-IB; Cytolysin IB; CLY-IB; HLY-IB; RTX-I toxin determinant B [H]
Number of amino acids: Translated: 871; Mature: 870
Protein sequence:
>871_residues MTDQDSHTPAPPASKPAKRGLKLSSITPNLTRKRRGDAANQTEGPVKISMVAPTANPKPANAEAKLDARLSVPKFLQRKA KPAAAETPAAPQTQAPPAVDPIEIESFVAPRPAATKPDAAPATEPLATFEPEEDPQNAEAADQDQMRPEPAPQTARETEA ASASMVAAEDTLGRLKARAQLLCRLAALRGCTLHAQDMLEHLQASGPAALRPEAMMSALITAGLKARVQSVKRPTPRHWP GIAIMQGGQPVLVLSQGKAGVTIYDSSCPDGRAEVPMQEFMPYYAGQILTTRATLSQLTQRHTPQLDTSHWFWGEFPKYR RQMGEIMLGSLVANVLAVAVALFSLQVYDRVVPHQSQATLWVLAVGALMAIGMEGILKLARARITDAAGRQIDMAVQHKL MRRVIGLKMDQSPLPPSGLFAALRDFASVREFFTSSTLSTLADVPFIAVFLLLVASIGGPVVYVILIGAVLMLLPAYFIQ KKMLAMTRLAQGASTKSGRLLNEVVNEMETIKTQRGEERVLRLWDELNLLSSQASNGQRKLASALTYWSQGVQQATYICA VILGTYMVFAGEFTVGTIIATGILTSRTLAPLTQFAGTLARWSNVRAALDALDMIADAPQEREKGRAYLRRESIEGRFEL REVVFRYDPDAAPTVDVPAVAVLPGQRVAILGVNGSGKSTLLKLLAGLYTPERGRVMLDGTDMSQIEPRDLRRHIGYLGQ EVRLFAGTLRDNLNLSYLPHEDERIMEALEFAGLAAFVRGHPRGLDLEIGDGGAGLSIGQRQAVGWARLHLQNPSVVLLD EPTAALDQTLERTLVSRLDSWLGTRTAIVATHRMPILSLTNRTLILQAGRMVVDGPRDEVLAHLNGGSKAS
Sequences:
>Translated_871_residues MTDQDSHTPAPPASKPAKRGLKLSSITPNLTRKRRGDAANQTEGPVKISMVAPTANPKPANAEAKLDARLSVPKFLQRKA KPAAAETPAAPQTQAPPAVDPIEIESFVAPRPAATKPDAAPATEPLATFEPEEDPQNAEAADQDQMRPEPAPQTARETEA ASASMVAAEDTLGRLKARAQLLCRLAALRGCTLHAQDMLEHLQASGPAALRPEAMMSALITAGLKARVQSVKRPTPRHWP GIAIMQGGQPVLVLSQGKAGVTIYDSSCPDGRAEVPMQEFMPYYAGQILTTRATLSQLTQRHTPQLDTSHWFWGEFPKYR RQMGEIMLGSLVANVLAVAVALFSLQVYDRVVPHQSQATLWVLAVGALMAIGMEGILKLARARITDAAGRQIDMAVQHKL MRRVIGLKMDQSPLPPSGLFAALRDFASVREFFTSSTLSTLADVPFIAVFLLLVASIGGPVVYVILIGAVLMLLPAYFIQ KKMLAMTRLAQGASTKSGRLLNEVVNEMETIKTQRGEERVLRLWDELNLLSSQASNGQRKLASALTYWSQGVQQATYICA VILGTYMVFAGEFTVGTIIATGILTSRTLAPLTQFAGTLARWSNVRAALDALDMIADAPQEREKGRAYLRRESIEGRFEL REVVFRYDPDAAPTVDVPAVAVLPGQRVAILGVNGSGKSTLLKLLAGLYTPERGRVMLDGTDMSQIEPRDLRRHIGYLGQ EVRLFAGTLRDNLNLSYLPHEDERIMEALEFAGLAAFVRGHPRGLDLEIGDGGAGLSIGQRQAVGWARLHLQNPSVVLLD EPTAALDQTLERTLVSRLDSWLGTRTAIVATHRMPILSLTNRTLILQAGRMVVDGPRDEVLAHLNGGSKAS >Mature_870_residues TDQDSHTPAPPASKPAKRGLKLSSITPNLTRKRRGDAANQTEGPVKISMVAPTANPKPANAEAKLDARLSVPKFLQRKAK PAAAETPAAPQTQAPPAVDPIEIESFVAPRPAATKPDAAPATEPLATFEPEEDPQNAEAADQDQMRPEPAPQTARETEAA SASMVAAEDTLGRLKARAQLLCRLAALRGCTLHAQDMLEHLQASGPAALRPEAMMSALITAGLKARVQSVKRPTPRHWPG IAIMQGGQPVLVLSQGKAGVTIYDSSCPDGRAEVPMQEFMPYYAGQILTTRATLSQLTQRHTPQLDTSHWFWGEFPKYRR QMGEIMLGSLVANVLAVAVALFSLQVYDRVVPHQSQATLWVLAVGALMAIGMEGILKLARARITDAAGRQIDMAVQHKLM RRVIGLKMDQSPLPPSGLFAALRDFASVREFFTSSTLSTLADVPFIAVFLLLVASIGGPVVYVILIGAVLMLLPAYFIQK KMLAMTRLAQGASTKSGRLLNEVVNEMETIKTQRGEERVLRLWDELNLLSSQASNGQRKLASALTYWSQGVQQATYICAV ILGTYMVFAGEFTVGTIIATGILTSRTLAPLTQFAGTLARWSNVRAALDALDMIADAPQEREKGRAYLRRESIEGRFELR EVVFRYDPDAAPTVDVPAVAVLPGQRVAILGVNGSGKSTLLKLLAGLYTPERGRVMLDGTDMSQIEPRDLRRHIGYLGQE VRLFAGTLRDNLNLSYLPHEDERIMEALEFAGLAAFVRGHPRGLDLEIGDGGAGLSIGQRQAVGWARLHLQNPSVVLLDE PTAALDQTLERTLVSRLDSWLGTRTAIVATHRMPILSLTNRTLILQAGRMVVDGPRDEVLAHLNGGSKAS
Specific function: Involved in the transport of the toxin RTX-I as well as that of RTX-II [H]
COG id: COG2274
COG function: function code V; ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 peptidase C39 domain [H]
Homologues:
Organism=Homo sapiens, GI255708477, Length=418, Percent_Identity=28.4688995215311, Blast_Score=154, Evalue=3e-37, Organism=Homo sapiens, GI42741659, Length=499, Percent_Identity=26.8537074148297, Blast_Score=143, Evalue=6e-34, Organism=Homo sapiens, GI148612844, Length=380, Percent_Identity=29.2105263157895, Blast_Score=141, Evalue=3e-33, Organism=Homo sapiens, GI9955963, Length=308, Percent_Identity=31.4935064935065, Blast_Score=140, Evalue=6e-33, Organism=Homo sapiens, GI9955966, Length=434, Percent_Identity=27.8801843317972, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI45243524, Length=434, Percent_Identity=27.8801843317972, Blast_Score=139, Evalue=1e-32, Organism=Homo sapiens, GI156105685, Length=521, Percent_Identity=25.3358925143954, Blast_Score=136, Evalue=7e-32, Organism=Homo sapiens, GI171184400, Length=245, Percent_Identity=35.1020408163265, Blast_Score=136, Evalue=9e-32, Organism=Homo sapiens, GI21536378, Length=240, Percent_Identity=32.5, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI9961252, Length=311, Percent_Identity=30.5466237942122, Blast_Score=131, Evalue=3e-30, Organism=Homo sapiens, GI73747915, Length=383, Percent_Identity=28.9817232375979, Blast_Score=131, Evalue=3e-30, Organism=Homo sapiens, GI4505771, Length=311, Percent_Identity=30.5466237942122, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI9961250, Length=311, Percent_Identity=30.5466237942122, Blast_Score=130, Evalue=4e-30, Organism=Homo sapiens, GI110832835, Length=232, Percent_Identity=31.4655172413793, Blast_Score=126, Evalue=1e-28, Organism=Homo sapiens, GI110832839, Length=232, Percent_Identity=31.4655172413793, Blast_Score=125, Evalue=1e-28, Organism=Homo sapiens, GI110832837, Length=232, Percent_Identity=30.1724137931034, Blast_Score=124, Evalue=3e-28, Organism=Homo sapiens, GI42490749, Length=378, Percent_Identity=27.5132275132275, Blast_Score=124, Evalue=4e-28, Organism=Homo sapiens, GI9665248, Length=386, Percent_Identity=27.2020725388601, Blast_Score=124, Evalue=5e-28, Organism=Homo sapiens, GI9955968, Length=431, Percent_Identity=26.4501160092807, Blast_Score=121, Evalue=3e-27, Organism=Homo sapiens, GI134142345, Length=216, Percent_Identity=33.3333333333333, Blast_Score=121, Evalue=4e-27, Organism=Homo sapiens, GI134142337, Length=216, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI134142342, Length=216, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI134142340, Length=216, Percent_Identity=33.3333333333333, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI9955970, Length=228, Percent_Identity=32.4561403508772, Blast_Score=120, Evalue=5e-27, Organism=Homo sapiens, GI25914749, Length=250, Percent_Identity=34, Blast_Score=118, Evalue=2e-26, Organism=Homo sapiens, GI73747917, Length=342, Percent_Identity=28.9473684210526, Blast_Score=116, Evalue=1e-25, Organism=Homo sapiens, GI4557481, Length=227, Percent_Identity=29.0748898678414, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI21729873, Length=516, Percent_Identity=24.4186046511628, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI15149474, Length=516, Percent_Identity=24.4186046511628, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI157502201, Length=395, Percent_Identity=25.5696202531646, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI190343023, Length=228, Percent_Identity=32.8947368421053, Blast_Score=110, Evalue=8e-24, Organism=Homo sapiens, GI89111135, Length=227, Percent_Identity=29.5154185022026, Blast_Score=108, Evalue=2e-23, Organism=Homo sapiens, GI90421313, Length=219, Percent_Identity=30.1369863013699, Blast_Score=107, Evalue=3e-23, Organism=Homo sapiens, GI118582255, Length=533, Percent_Identity=25.140712945591, Blast_Score=104, Evalue=4e-22, Organism=Homo sapiens, GI66529005, Length=223, Percent_Identity=28.2511210762332, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI157502203, Length=431, Percent_Identity=25.0580046403712, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI134142335, Length=143, Percent_Identity=34.2657342657343, Blast_Score=84, Evalue=5e-16, Organism=Homo sapiens, GI21729876, Length=516, Percent_Identity=22.2868217054264, Blast_Score=74, Evalue=8e-13, Organism=Homo sapiens, GI255708371, Length=111, Percent_Identity=34.2342342342342, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI4826958, Length=212, Percent_Identity=32.0754716981132, Blast_Score=71, Evalue=4e-12, Organism=Homo sapiens, GI105990541, Length=218, Percent_Identity=28.4403669724771, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI255708373, Length=123, Percent_Identity=31.7073170731707, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1787143, Length=311, Percent_Identity=30.5466237942122, Blast_Score=142, Evalue=8e-35, Organism=Escherichia coli, GI1787112, Length=223, Percent_Identity=34.0807174887892, Blast_Score=118, Evalue=2e-27, Organism=Escherichia coli, GI1787113, Length=401, Percent_Identity=27.930174563591, Blast_Score=110, Evalue=5e-25, Organism=Escherichia coli, GI1786653, Length=310, Percent_Identity=26.1290322580645, Blast_Score=108, Evalue=2e-24, Organism=Escherichia coli, GI1786654, Length=440, Percent_Identity=24.3181818181818, Blast_Score=107, Evalue=4e-24, Organism=Escherichia coli, GI87081791, Length=243, Percent_Identity=31.6872427983539, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1789032, Length=219, Percent_Identity=31.5068493150685, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1787370, Length=205, Percent_Identity=31.219512195122, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=30.6603773584906, Blast_Score=82, Evalue=1e-16, Organism=Escherichia coli, GI1786253, Length=202, Percent_Identity=32.1782178217822, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI1786398, Length=224, Percent_Identity=29.0178571428571, Blast_Score=79, Evalue=9e-16, Organism=Escherichia coli, GI1788225, Length=212, Percent_Identity=32.5471698113208, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1789873, Length=201, Percent_Identity=31.3432835820896, Blast_Score=77, Evalue=5e-15, Organism=Escherichia coli, GI87081782, Length=234, Percent_Identity=26.9230769230769, Blast_Score=77, Evalue=7e-15, Organism=Escherichia coli, GI87081709, Length=233, Percent_Identity=29.1845493562232, Blast_Score=76, Evalue=8e-15, Organism=Escherichia coli, GI1786872, Length=199, Percent_Identity=31.1557788944724, Blast_Score=76, Evalue=9e-15, Organism=Escherichia coli, GI1790467, Length=198, Percent_Identity=32.8282828282828, Blast_Score=76, Evalue=1e-14, Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=27.2727272727273, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787712, Length=215, Percent_Identity=30.6976744186047, Blast_Score=73, Evalue=7e-14, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=32.8571428571429, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1788210, Length=192, Percent_Identity=31.25, Blast_Score=72, Evalue=1e-13, Organism=Escherichia coli, GI1786345, Length=240, Percent_Identity=30, Blast_Score=70, Evalue=6e-13, Organism=Escherichia coli, GI1786803, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI48994943, Length=242, Percent_Identity=28.099173553719, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1788540, Length=137, Percent_Identity=35.036496350365, Blast_Score=67, Evalue=6e-12, Organism=Escherichia coli, GI1788450, Length=204, Percent_Identity=30.3921568627451, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787029, Length=203, Percent_Identity=29.5566502463054, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1787164, Length=202, Percent_Identity=33.6633663366337, Blast_Score=64, Evalue=4e-11, Organism=Escherichia coli, GI48995001, Length=200, Percent_Identity=31, Blast_Score=64, Evalue=5e-11, Organism=Escherichia coli, GI1788506, Length=254, Percent_Identity=26.3779527559055, Blast_Score=64, Evalue=5e-11, Organism=Escherichia coli, GI1790525, Length=208, Percent_Identity=26.9230769230769, Blast_Score=64, Evalue=6e-11, Organism=Escherichia coli, GI1787792, Length=198, Percent_Identity=27.2727272727273, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI193202349, Length=411, Percent_Identity=27.4939172749392, Blast_Score=153, Evalue=5e-37, Organism=Caenorhabditis elegans, GI17558664, Length=440, Percent_Identity=27.2727272727273, Blast_Score=151, Evalue=1e-36, Organism=Caenorhabditis elegans, GI71984940, Length=377, Percent_Identity=28.3819628647215, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17567269, Length=309, Percent_Identity=31.3915857605178, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25146777, Length=409, Percent_Identity=29.3398533007335, Blast_Score=140, Evalue=3e-33, Organism=Caenorhabditis elegans, GI193209708, Length=247, Percent_Identity=33.6032388663968, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI115535101, Length=316, Percent_Identity=32.2784810126582, Blast_Score=135, Evalue=1e-31, Organism=Caenorhabditis elegans, GI212646699, Length=256, Percent_Identity=30.859375, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=34.3220338983051, Blast_Score=132, Evalue=7e-31, Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=34.3220338983051, Blast_Score=132, Evalue=8e-31, Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=34.3220338983051, Blast_Score=132, Evalue=8e-31, Organism=Caenorhabditis elegans, GI17567265, Length=231, Percent_Identity=34.1991341991342, Blast_Score=131, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17543740, Length=234, Percent_Identity=31.1965811965812, Blast_Score=130, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17565938, Length=234, Percent_Identity=31.1965811965812, Blast_Score=130, Evalue=3e-30, Organism=Caenorhabditis elegans, GI193208177, Length=236, Percent_Identity=34.3220338983051, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI115533592, Length=389, Percent_Identity=28.2776349614396, Blast_Score=129, Evalue=5e-30, Organism=Caenorhabditis elegans, GI71992290, Length=437, Percent_Identity=24.0274599542334, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17533971, Length=376, Percent_Identity=24.7340425531915, Blast_Score=124, Evalue=3e-28, Organism=Caenorhabditis elegans, GI17569143, Length=231, Percent_Identity=31.6017316017316, Blast_Score=122, Evalue=6e-28, Organism=Caenorhabditis elegans, GI17569145, Length=230, Percent_Identity=30.8695652173913, Blast_Score=121, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71992285, Length=301, Percent_Identity=29.9003322259136, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17541710, Length=379, Percent_Identity=27.1767810026385, Blast_Score=120, Evalue=3e-27, Organism=Caenorhabditis elegans, GI17551700, Length=218, Percent_Identity=31.1926605504587, Blast_Score=117, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17551702, Length=218, Percent_Identity=31.1926605504587, Blast_Score=117, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17511077, Length=399, Percent_Identity=25.062656641604, Blast_Score=115, Evalue=1e-25, Organism=Caenorhabditis elegans, GI32566680, Length=206, Percent_Identity=33.495145631068, Blast_Score=114, Evalue=3e-25, Organism=Caenorhabditis elegans, GI115534520, Length=313, Percent_Identity=26.1980830670927, Blast_Score=113, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17567243, Length=217, Percent_Identity=31.3364055299539, Blast_Score=113, Evalue=4e-25, Organism=Caenorhabditis elegans, GI71996550, Length=381, Percent_Identity=26.246719160105, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17569081, Length=233, Percent_Identity=29.6137339055794, Blast_Score=110, Evalue=4e-24, Organism=Caenorhabditis elegans, GI193209740, Length=234, Percent_Identity=30.7692307692308, Blast_Score=108, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71988343, Length=236, Percent_Identity=29.2372881355932, Blast_Score=108, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71992066, Length=224, Percent_Identity=29.9107142857143, Blast_Score=106, Evalue=6e-23, Organism=Caenorhabditis elegans, GI86564969, Length=224, Percent_Identity=29.9107142857143, Blast_Score=106, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71992070, Length=224, Percent_Identity=29.9107142857143, Blast_Score=106, Evalue=7e-23, Organism=Caenorhabditis elegans, GI25146765, Length=224, Percent_Identity=29.9107142857143, Blast_Score=106, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71992080, Length=215, Percent_Identity=30.2325581395349, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17556528, Length=246, Percent_Identity=28.4552845528455, Blast_Score=102, Evalue=7e-22, Organism=Caenorhabditis elegans, GI32563727, Length=325, Percent_Identity=23.6923076923077, Blast_Score=73, Evalue=6e-13, Organism=Caenorhabditis elegans, GI71983516, Length=231, Percent_Identity=27.7056277056277, Blast_Score=73, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71983523, Length=231, Percent_Identity=27.7056277056277, Blast_Score=73, Evalue=8e-13, Organism=Caenorhabditis elegans, GI71983510, Length=231, Percent_Identity=27.7056277056277, Blast_Score=72, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6323959, Length=411, Percent_Identity=28.7104622871046, Blast_Score=146, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6323217, Length=415, Percent_Identity=27.9518072289157, Blast_Score=117, Evalue=8e-27, Organism=Saccharomyces cerevisiae, GI6324985, Length=320, Percent_Identity=27.5, Blast_Score=116, Evalue=1e-26, Organism=Saccharomyces cerevisiae, GI6321752, Length=232, Percent_Identity=30.1724137931034, Blast_Score=111, Evalue=4e-25, Organism=Saccharomyces cerevisiae, GI6322640, Length=536, Percent_Identity=25.5597014925373, Blast_Score=107, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6322980, Length=238, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6320339, Length=224, Percent_Identity=28.5714285714286, Blast_Score=104, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6321720, Length=441, Percent_Identity=22.6757369614512, Blast_Score=96, Evalue=3e-20, Organism=Saccharomyces cerevisiae, GI6322957, Length=235, Percent_Identity=28.0851063829787, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6323014, Length=232, Percent_Identity=29.3103448275862, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI24641565, Length=459, Percent_Identity=26.3616557734205, Blast_Score=146, Evalue=8e-35, Organism=Drosophila melanogaster, GI221474134, Length=228, Percent_Identity=36.4035087719298, Blast_Score=136, Evalue=7e-32, Organism=Drosophila melanogaster, GI24659289, Length=299, Percent_Identity=32.7759197324415, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI23397593, Length=317, Percent_Identity=29.3375394321767, Blast_Score=135, Evalue=1e-31, Organism=Drosophila melanogaster, GI281363262, Length=262, Percent_Identity=35.4961832061069, Blast_Score=134, Evalue=2e-31, Organism=Drosophila melanogaster, GI24653245, Length=262, Percent_Identity=35.4961832061069, Blast_Score=134, Evalue=3e-31, Organism=Drosophila melanogaster, GI17136662, Length=417, Percent_Identity=26.8585131894484, Blast_Score=132, Evalue=1e-30, Organism=Drosophila melanogaster, GI21357907, Length=231, Percent_Identity=32.9004329004329, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI85726357, Length=231, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=5e-28, Organism=Drosophila melanogaster, GI24650986, Length=422, Percent_Identity=25.5924170616114, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI21358185, Length=422, Percent_Identity=25.5924170616114, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552347, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552343, Length=236, Percent_Identity=30.9322033898305, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552351, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552363, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552335, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552353, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI45552345, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552337, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552349, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552357, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552341, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552359, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45550972, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI24583969, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552339, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552355, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552361, Length=239, Percent_Identity=30.9623430962343, Blast_Score=115, Evalue=2e-25, Organism=Drosophila melanogaster, GI24585557, Length=428, Percent_Identity=25.9345794392523, Blast_Score=113, Evalue=7e-25, Organism=Drosophila melanogaster, GI45552437, Length=231, Percent_Identity=32.9004329004329, Blast_Score=112, Evalue=8e-25, Organism=Drosophila melanogaster, GI45550390, Length=230, Percent_Identity=32.1739130434783, Blast_Score=112, Evalue=9e-25, Organism=Drosophila melanogaster, GI24585091, Length=229, Percent_Identity=31.4410480349345, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI45551502, Length=380, Percent_Identity=26.0526315789474, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI45551501, Length=380, Percent_Identity=26.0526315789474, Blast_Score=112, Evalue=1e-24, Organism=Drosophila melanogaster, GI62484234, Length=229, Percent_Identity=31.0043668122271, Blast_Score=111, Evalue=2e-24, Organism=Drosophila melanogaster, GI21357851, Length=384, Percent_Identity=27.34375, Blast_Score=110, Evalue=5e-24, Organism=Drosophila melanogaster, GI28574259, Length=247, Percent_Identity=29.5546558704453, Blast_Score=108, Evalue=2e-23, Organism=Drosophila melanogaster, GI281361582, Length=229, Percent_Identity=31.0043668122271, Blast_Score=106, Evalue=7e-23, Organism=Drosophila melanogaster, GI24648279, Length=427, Percent_Identity=25.2927400468384, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI221460257, Length=449, Percent_Identity=24.7216035634744, Blast_Score=104, Evalue=3e-22, Organism=Drosophila melanogaster, GI161077321, Length=419, Percent_Identity=25.5369928400955, Blast_Score=103, Evalue=6e-22, Organism=Drosophila melanogaster, GI19920928, Length=520, Percent_Identity=24.0384615384615, Blast_Score=98, Evalue=3e-20, Organism=Drosophila melanogaster, GI24649703, Length=218, Percent_Identity=32.1100917431193, Blast_Score=97, Evalue=4e-20, Organism=Drosophila melanogaster, GI161078426, Length=208, Percent_Identity=27.8846153846154, Blast_Score=77, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017940 - InterPro: IPR001140 - InterPro: IPR011527 - InterPro: IPR003593 - InterPro: IPR010132 - InterPro: IPR005074 [H]
Pfam domain/function: PF00664 ABC_membrane; PF00005 ABC_tran; PF03412 Peptidase_C39 [H]
EC number: NA
Molecular weight: Translated: 94365; Mature: 94234
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: PS50893 ABC_TRANSPORTER_2 ; PS50929 ABC_TM1F
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDQDSHTPAPPASKPAKRGLKLSSITPNLTRKRRGDAANQTEGPVKISMVAPTANPKPA CCCCCCCCCCCCCCCHHHCCCEEECCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC NAEAKLDARLSVPKFLQRKAKPAAAETPAAPQTQAPPAVDPIEIESFVAPRPAATKPDAA CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC PATEPLATFEPEEDPQNAEAADQDQMRPEPAPQTARETEAASASMVAAEDTLGRLKARAQ CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLCRLAALRGCTLHAQDMLEHLQASGPAALRPEAMMSALITAGLKARVQSVKRPTPRHWP HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GIAIMQGGQPVLVLSQGKAGVTIYDSSCPDGRAEVPMQEFMPYYAGQILTTRATLSQLTQ CEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH RHTPQLDTSHWFWGEFPKYRRQMGEIMLGSLVANVLAVAVALFSLQVYDRVVPHQSQATL HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH WVLAVGALMAIGMEGILKLARARITDAAGRQIDMAVQHKLMRRVIGLKMDQSPLPPSGLF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AALRDFASVREFFTSSTLSTLADVPFIAVFLLLVASIGGPVVYVILIGAVLMLLPAYFIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KKMLAMTRLAQGASTKSGRLLNEVVNEMETIKTQRGEERVLRLWDELNLLSSQASNGQRK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH LASALTYWSQGVQQATYICAVILGTYMVFAGEFTVGTIIATGILTSRTLAPLTQFAGTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWSNVRAALDALDMIADAPQEREKGRAYLRRESIEGRFELREVVFRYDPDAAPTVDVPAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEE AVLPGQRVAILGVNGSGKSTLLKLLAGLYTPERGRVMLDGTDMSQIEPRDLRRHIGYLGQ EECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCH EVRLFAGTLRDNLNLSYLPHEDERIMEALEFAGLAAFVRGHPRGLDLEIGDGGAGLSIGQ HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC RQAVGWARLHLQNPSVVLLDEPTAALDQTLERTLVSRLDSWLGTRTAIVATHRMPILSLT HHHCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCEEEEC NRTLILQAGRMVVDGPRDEVLAHLNGGSKAS CCEEEEECCCEEECCCHHHHHEECCCCCCCC >Mature Secondary Structure TDQDSHTPAPPASKPAKRGLKLSSITPNLTRKRRGDAANQTEGPVKISMVAPTANPKPA CCCCCCCCCCCCCCHHHCCCEEECCCCCHHHHHCCCCCCCCCCCEEEEEECCCCCCCCC NAEAKLDARLSVPKFLQRKAKPAAAETPAAPQTQAPPAVDPIEIESFVAPRPAATKPDAA CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCC PATEPLATFEPEEDPQNAEAADQDQMRPEPAPQTARETEAASASMVAAEDTLGRLKARAQ CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LLCRLAALRGCTLHAQDMLEHLQASGPAALRPEAMMSALITAGLKARVQSVKRPTPRHWP HHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC GIAIMQGGQPVLVLSQGKAGVTIYDSSCPDGRAEVPMQEFMPYYAGQILTTRATLSQLTQ CEEEEECCCEEEEEECCCCCEEEECCCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHH RHTPQLDTSHWFWGEFPKYRRQMGEIMLGSLVANVLAVAVALFSLQVYDRVVPHQSQATL HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH WVLAVGALMAIGMEGILKLARARITDAAGRQIDMAVQHKLMRRVIGLKMDQSPLPPSGLF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHH AALRDFASVREFFTSSTLSTLADVPFIAVFLLLVASIGGPVVYVILIGAVLMLLPAYFIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH KKMLAMTRLAQGASTKSGRLLNEVVNEMETIKTQRGEERVLRLWDELNLLSSQASNGQRK HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHH LASALTYWSQGVQQATYICAVILGTYMVFAGEFTVGTIIATGILTSRTLAPLTQFAGTLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RWSNVRAALDALDMIADAPQEREKGRAYLRRESIEGRFELREVVFRYDPDAAPTVDVPAV HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCEE AVLPGQRVAILGVNGSGKSTLLKLLAGLYTPERGRVMLDGTDMSQIEPRDLRRHIGYLGQ EECCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCH EVRLFAGTLRDNLNLSYLPHEDERIMEALEFAGLAAFVRGHPRGLDLEIGDGGAGLSIGQ HHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCC RQAVGWARLHLQNPSVVLLDEPTAALDQTLERTLVSRLDSWLGTRTAIVATHRMPILSLT HHHCCEEEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCEEEEC NRTLILQAGRMVVDGPRDEVLAHLNGGSKAS CCEEEEECCCEEECCCHHHHHEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1860823; 1937809; 8181764 [H]