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The map label for this gene is nrdI

Identifier: 99080361

GI number: 99080361

Start: 547395

End: 547817

Strand: Reverse

Name: nrdI

Synonym: TM1040_0520

Alternate gene names: 99080361

Gene position: 547817-547395 (Counterclockwise)

Preceding gene: 99080362

Following gene: 99080360

Centisome position: 17.11

GC content: 60.99

Gene sequence:

>423_bases
GTGGTCGGGCTTGTCTATTACTCCTCCCGTTCGGGCAATACGGCCCGTTTGATGGAGCGACTGGGGCTCGAGGCTCTGCG
GCTGCCGCAGACGGAGCCTTCCCCCGAAGTAGATGCGCCCTATGTGTTGGTGACGCCAACCTTTGCCGATGGTGAAGGCC
GGGGCGCAGTGCCAAAACCGGTCATCAAATTTCTGAATAACAGCCGCAATCGCGCCCTCCTCAGGGGTGTGATTGCCGGA
GGCAACCGCAACTTTGGTGACACCTTTGCCCTCGCGGGGGATGTGATCGCCAAGAAATGCAATGTCCCCGTCCTTTACCG
CTTTGAGTTGGCGGGAACCGAAACAGACATCGCCCGCATGCGCGCGGGCCTCGCCCGGTTCTGGGCGGCACAGGAGCAGC
AGACATGCTTGACGCAAGCGTAA

Upstream 100 bases:

>100_bases
TCGTCAGGCACCCGTGGTGGTCGCTGGCGAAGAGCACTGGGCTGGTTTTCGCCCTGACTTGATCGGCCAGTTGGCGTAAA
GGTAAAAGGTGACCGGGTAA

Downstream 100 bases:

>100_bases
CCGCCGATCTCGACTATCACGCGCTGAACGCGATGTTGAACCTCTATGACGACGAGGGCAACATCCAGTTCGACGCCGAC
CGTATGGCGGCCCGGCAGTA

Product: ribonucleotide reductase stimulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MVGLVYYSSRSGNTARLMERLGLEALRLPQTEPSPEVDAPYVLVTPTFADGEGRGAVPKPVIKFLNNSRNRALLRGVIAG
GNRNFGDTFALAGDVIAKKCNVPVLYRFELAGTETDIARMRAGLARFWAAQEQQTCLTQA

Sequences:

>Translated_140_residues
MVGLVYYSSRSGNTARLMERLGLEALRLPQTEPSPEVDAPYVLVTPTFADGEGRGAVPKPVIKFLNNSRNRALLRGVIAG
GNRNFGDTFALAGDVIAKKCNVPVLYRFELAGTETDIARMRAGLARFWAAQEQQTCLTQA
>Mature_140_residues
MVGLVYYSSRSGNTARLMERLGLEALRLPQTEPSPEVDAPYVLVTPTFADGEGRGAVPKPVIKFLNNSRNRALLRGVIAG
GNRNFGDTFALAGDVIAKKCNVPVLYRFELAGTETDIARMRAGLARFWAAQEQQTCLTQA

Specific function: Probably involved in ribonucleotide reductase function

COG id: COG1780

COG function: function code F; Protein involved in ribonucleotide reduction

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nrdI family

Homologues:

Organism=Escherichia coli, GI1789029, Length=134, Percent_Identity=57.4626865671642, Blast_Score=159, Evalue=7e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NRDI_SILST (Q1GJB3)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_612515.1
- ProteinModelPortal:   Q1GJB3
- SMR:   Q1GJB3
- STRING:   Q1GJB3
- GeneID:   4077226
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_0520
- NMPDR:   fig|292414.1.peg.2314
- eggNOG:   COG1780
- HOGENOM:   HBG697191
- OMA:   FELMGTA
- PhylomeDB:   Q1GJB3
- ProtClustDB:   PRK03600
- BioCyc:   SSP292414:TM1040_0520-MONOMER
- HAMAP:   MF_00128
- InterPro:   IPR020852
- InterPro:   IPR004465
- PIRSF:   PIRSF005087
- TIGRFAMs:   TIGR00333

Pfam domain/function: PF07972 Flavodoxin_NdrI

EC number: NA

Molecular weight: Translated: 15244; Mature: 15244

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGLVYYSSRSGNTARLMERLGLEALRLPQTEPSPEVDAPYVLVTPTFADGEGRGAVPKP
CEEEEEEECCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH
VIKFLNNSRNRALLRGVIAGGNRNFGDTFALAGDVIAKKCNVPVLYRFELAGTETDIARM
HHHHHCCCCCCEEHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
RAGLARFWAAQEQQTCLTQA
HHHHHHHHHCCCHHHHHCCC
>Mature Secondary Structure
MVGLVYYSSRSGNTARLMERLGLEALRLPQTEPSPEVDAPYVLVTPTFADGEGRGAVPKP
CEEEEEEECCCCCHHHHHHHHCHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHH
VIKFLNNSRNRALLRGVIAGGNRNFGDTFALAGDVIAKKCNVPVLYRFELAGTETDIARM
HHHHHCCCCCCEEHHHEEECCCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHH
RAGLARFWAAQEQQTCLTQA
HHHHHHHHHCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA