Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080352

Identifier: 99080352

GI number: 99080352

Start: 537112

End: 538005

Strand: Direct

Name: 99080352

Synonym: TM1040_0511

Alternate gene names: NA

Gene position: 537112-538005 (Clockwise)

Preceding gene: 99080351

Following gene: 99080353

Centisome position: 16.78

GC content: 61.19

Gene sequence:

>894_bases
ATGACCACACTTGGCATAGATCATCCGCTTGTCTGTGTGCGCGATCTGGCCGCGAAGCGCGCGACGTATCAAAGCCTCGG
CTTTTTGATGAAGCCCCCGGGGATGCACCCTTGGGGCACCTCGACGGCGCTGGTGATCTTTCGAAACCAGCTTCTTGAGC
TGGTCAGTATTGAGGATGAGAGCCTGCTGGATGGCTATGCAGCGGGATCATTCCGCTTTGGCCGTCATGTCGAGGCGTGG
CTGGCAGAGCGCGAAGGGGTCTGCCTTTCTGCACTCAATTCAATGGATGCTGAGGCGGATGAGGCAGCAGTGCTGGCGCG
CGGTGGCAGCTGTGCTGGCACGGTTGAATTCGGGCGCGACGTGGTGCGCGATGATGGCACGCCGGATCGTACCAAGACCA
CGCTCAAGATTTTCCCGCATGCGGGGTTGCCGCGCCTCAGCATGTTTGCCTGCCAGCAACATCGCCGCGACCTGATCGAG
TTTCCTGATTGGATGGATCATCCCAATGGGGCACATGGCTTTGCCTCTGCGACCATCCTTGCCGCGCCTTCGGATCAGGG
CAGGGTGCGCGATTGGCTGTCCGTGCTCCACGGAGCTGACGCGGTACGGGACACCGACTGGGGATTTGAGGTTGCAACAA
CCAATGGGCGGTGGCGCGTGGTTAGCCGGGCCACCGCGCCTGCGCTCTTGGGAAAGCTGCCCGACGGGCTCGCGTCCGAT
GGCGCGCCATCGGTGATCTCGCTCGACATACGCTGCCATGCGCTGTCACAGCTTCGCCCCTTCGTCGAGGCAGGAGAGTT
CGTCTGCCAGGACGTCAATGGGGCCTTGGTGCTGACAGAGGTTGCGCGTCTGGGTGGCATCCTTCTGAGTTTTCACGAAA
TACCAAAGGTTTGA

Upstream 100 bases:

>100_bases
TGCCCGCGGGCCATGTGGTTGCGGGGCCACCCGCGTCAGATCGGGGTGTCGGTCGCTTCGCGGGCTTCACACCTTTGCAG
CAACTCAGGGGGCAAGACAG

Downstream 100 bases:

>100_bases
GAGAGAGCATGTTCGACACGACGCATATCGAAGAGGCCATCGCCCTGCGCCATGACCTTCATCGCCACCCAGAGTTGGGG
TTCGAAGAGCATCGCACCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MTTLGIDHPLVCVRDLAAKRATYQSLGFLMKPPGMHPWGTSTALVIFRNQLLELVSIEDESLLDGYAAGSFRFGRHVEAW
LAEREGVCLSALNSMDAEADEAAVLARGGSCAGTVEFGRDVVRDDGTPDRTKTTLKIFPHAGLPRLSMFACQQHRRDLIE
FPDWMDHPNGAHGFASATILAAPSDQGRVRDWLSVLHGADAVRDTDWGFEVATTNGRWRVVSRATAPALLGKLPDGLASD
GAPSVISLDIRCHALSQLRPFVEAGEFVCQDVNGALVLTEVARLGGILLSFHEIPKV

Sequences:

>Translated_297_residues
MTTLGIDHPLVCVRDLAAKRATYQSLGFLMKPPGMHPWGTSTALVIFRNQLLELVSIEDESLLDGYAAGSFRFGRHVEAW
LAEREGVCLSALNSMDAEADEAAVLARGGSCAGTVEFGRDVVRDDGTPDRTKTTLKIFPHAGLPRLSMFACQQHRRDLIE
FPDWMDHPNGAHGFASATILAAPSDQGRVRDWLSVLHGADAVRDTDWGFEVATTNGRWRVVSRATAPALLGKLPDGLASD
GAPSVISLDIRCHALSQLRPFVEAGEFVCQDVNGALVLTEVARLGGILLSFHEIPKV
>Mature_296_residues
TTLGIDHPLVCVRDLAAKRATYQSLGFLMKPPGMHPWGTSTALVIFRNQLLELVSIEDESLLDGYAAGSFRFGRHVEAWL
AEREGVCLSALNSMDAEADEAAVLARGGSCAGTVEFGRDVVRDDGTPDRTKTTLKIFPHAGLPRLSMFACQQHRRDLIEF
PDWMDHPNGAHGFASATILAAPSDQGRVRDWLSVLHGADAVRDTDWGFEVATTNGRWRVVSRATAPALLGKLPDGLASDG
APSVISLDIRCHALSQLRPFVEAGEFVCQDVNGALVLTEVARLGGILLSFHEIPKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32152; Mature: 32021

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLGIDHPLVCVRDLAAKRATYQSLGFLMKPPGMHPWGTSTALVIFRNQLLELVSIEDE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
SLLDGYAAGSFRFGRHVEAWLAEREGVCLSALNSMDAEADEAAVLARGGSCAGTVEFGRD
HHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEHHHHHH
VVRDDGTPDRTKTTLKIFPHAGLPRLSMFACQQHRRDLIEFPDWMDHPNGAHGFASATIL
HHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
AAPSDQGRVRDWLSVLHGADAVRDTDWGFEVATTNGRWRVVSRATAPALLGKLPDGLASD
ECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHCCCCCCCCC
GAPSVISLDIRCHALSQLRPFVEAGEFVCQDVNGALVLTEVARLGGILLSFHEIPKV
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TTLGIDHPLVCVRDLAAKRATYQSLGFLMKPPGMHPWGTSTALVIFRNQLLELVSIEDE
CCCCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCH
SLLDGYAAGSFRFGRHVEAWLAEREGVCLSALNSMDAEADEAAVLARGGSCAGTVEFGRD
HHHCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEECCCCCEEEHHHHHH
VVRDDGTPDRTKTTLKIFPHAGLPRLSMFACQQHRRDLIEFPDWMDHPNGAHGFASATIL
HHHCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
AAPSDQGRVRDWLSVLHGADAVRDTDWGFEVATTNGRWRVVSRATAPALLGKLPDGLASD
ECCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHCCCCCCCCC
GAPSVISLDIRCHALSQLRPFVEAGEFVCQDVNGALVLTEVARLGGILLSFHEIPKV
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA