| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is est [H]
Identifier: 99080292
GI number: 99080292
Start: 468806
End: 469702
Strand: Direct
Name: est [H]
Synonym: TM1040_0451
Alternate gene names: 99080292
Gene position: 468806-469702 (Clockwise)
Preceding gene: 99080291
Following gene: 99080297
Centisome position: 14.65
GC content: 64.55
Gene sequence:
>897_bases GTGAGTCTTGCGCTTGATTTGCTATTGGTTGGGCTGCGCCATGTGGTGCGGCCCCGCCTGCGCCGTGCGCATGGCCCGCT AGAGGCGCGCCGAGCCTTTGACCGCGCGGCAGCGGTGACATTCCGGGCGCCGCCCTTCCTTTGTCGCATCAAGGACCGGG CAGGGCTCGACCGGATCCACTGTGGTCCGCGCCTGCATGGCAAAATTATTCTTTATTTTCACGGCGGTGGCTATGTGGCC GGTGGCCCGCATACGCATGCAGCCATGCTCGGGCAGCTGTCAGGGCTTTCACAGCTTGAGGTCTGCGCGCCGGCGTATCC GCTGGCCCCCGAACATCCTTTTCCGGCGGCGTTCGAGGGCGCCGTGGCATCTTGGGAGCATCTGATGGCTGCGGGTTACG CGCCGTCGGATGTGGTGTTGGGCGGCGATTCTGCCGGTGGCGGCCTCGCGCTCGCGCTGCTGTCCTATCTATGCCACGCG GCAACACCGCCTGCGGCCGCGTTTGCGATGTCGCCCTGGTGCGATCTGAGCCTGAGTGGCGACAGCCTGCAGGGCAATGC AGAGCGAGATCCGCTCCTGCCCGCAGAGCGTATCCGGGAACTTGTGGGCTATATCCTGCCCGAAGGCGCCGATGACACGG ACCCGCGGGTGTCGCCACTTTTTGCAGAGTTCCCCACCTGCCCGCCGGTCTTGCTGCAGTATAGCGAGACGGAAATCCTG TTTGATGATTGCCGCCGGATGGCAGAGCGCCTCAGGGGTTTTGACGCTGACGTTCTGGAGAGGCGGCATCCCCGCGCACC ACATGTCTGGCATCTGTTTCAGGGCTGGGTCCCCGAGGCCCGTAAGTCGCTGAGGGAGATTGCCGATTTTGCACGCGCGG CGTTTACTGCGCGCTAA
Upstream 100 bases:
>100_bases AGATCAACGTGACCTCTCCGACCGGAATTCAGGAGCTTGAGCGCTTTAACGGCGTCAATATCGCGGAAAAAGTCTGGGAG GCGATTGAGGCGCGCGTTGC
Downstream 100 bases:
>100_bases CTGGGCAGGCGGTAGGACAGTGCCTCGGCTACATGATCGCGGGCGATCTGCGCTTCGGCATCCAGATCCGCAATGGTGCG GGCAACGCGCAAGACCCGGT
Product: Alpha/beta hydrolase fold-3
Products: alcohol; a carboxylate [C]
Alternate protein names: NA
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSLALDLLLVGLRHVVRPRLRRAHGPLEARRAFDRAAAVTFRAPPFLCRIKDRAGLDRIHCGPRLHGKIILYFHGGGYVA GGPHTHAAMLGQLSGLSQLEVCAPAYPLAPEHPFPAAFEGAVASWEHLMAAGYAPSDVVLGGDSAGGGLALALLSYLCHA ATPPAAAFAMSPWCDLSLSGDSLQGNAERDPLLPAERIRELVGYILPEGADDTDPRVSPLFAEFPTCPPVLLQYSETEIL FDDCRRMAERLRGFDADVLERRHPRAPHVWHLFQGWVPEARKSLREIADFARAAFTAR
Sequences:
>Translated_298_residues MSLALDLLLVGLRHVVRPRLRRAHGPLEARRAFDRAAAVTFRAPPFLCRIKDRAGLDRIHCGPRLHGKIILYFHGGGYVA GGPHTHAAMLGQLSGLSQLEVCAPAYPLAPEHPFPAAFEGAVASWEHLMAAGYAPSDVVLGGDSAGGGLALALLSYLCHA ATPPAAAFAMSPWCDLSLSGDSLQGNAERDPLLPAERIRELVGYILPEGADDTDPRVSPLFAEFPTCPPVLLQYSETEIL FDDCRRMAERLRGFDADVLERRHPRAPHVWHLFQGWVPEARKSLREIADFARAAFTAR >Mature_297_residues SLALDLLLVGLRHVVRPRLRRAHGPLEARRAFDRAAAVTFRAPPFLCRIKDRAGLDRIHCGPRLHGKIILYFHGGGYVAG GPHTHAAMLGQLSGLSQLEVCAPAYPLAPEHPFPAAFEGAVASWEHLMAAGYAPSDVVLGGDSAGGGLALALLSYLCHAA TPPAAAFAMSPWCDLSLSGDSLQGNAERDPLLPAERIRELVGYILPEGADDTDPRVSPLFAEFPTCPPVLLQYSETEILF DDCRRMAERLRGFDADVLERRHPRAPHVWHLFQGWVPEARKSLREIADFARAAFTAR
Specific function: Has An Esterase Activity. Triacetyl Glycerol (Triacetin) Is A Substrate Of The Enzyme. [C]
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Secreted (Potential). Note=External to the cytoplasmic membrane [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Escherichia coli, GI1786682, Length=296, Percent_Identity=26.3513513513513, Blast_Score=62, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 - InterPro: IPR002168 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: 3.1.1.- [C]
Molecular weight: Translated: 32473; Mature: 32341
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLALDLLLVGLRHVVRPRLRRAHGPLEARRAFDRAAAVTFRAPPFLCRIKDRAGLDRIH CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCEEEECCCCCCCHHC CGPRLHGKIILYFHGGGYVAGGPHTHAAMLGQLSGLSQLEVCAPAYPLAPEHPFPAAFEG CCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHH AVASWEHLMAAGYAPSDVVLGGDSAGGGLALALLSYLCHAATPPAAAFAMSPWCDLSLSG HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEECC DSLQGNAERDPLLPAERIRELVGYILPEGADDTDPRVSPLFAEFPTCPPVLLQYSETEIL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHEECCCHHHH FDDCRRMAERLRGFDADVLERRHPRAPHVWHLFQGWVPEARKSLREIADFARAAFTAR HHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLALDLLLVGLRHVVRPRLRRAHGPLEARRAFDRAAAVTFRAPPFLCRIKDRAGLDRIH HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEEECCCCCEEEECCCCCCCHHC CGPRLHGKIILYFHGGGYVAGGPHTHAAMLGQLSGLSQLEVCAPAYPLAPEHPFPAAFEG CCCCCCCEEEEEECCCCEECCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCHHHHH AVASWEHLMAAGYAPSDVVLGGDSAGGGLALALLSYLCHAATPPAAAFAMSPWCDLSLSG HHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCEEECC DSLQGNAERDPLLPAERIRELVGYILPEGADDTDPRVSPLFAEFPTCPPVLLQYSETEIL CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCHHHEECCCHHHH FDDCRRMAERLRGFDADVLERRHPRAPHVWHLFQGWVPEARKSLREIADFARAAFTAR HHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Carboxylic ester; H2O [C]
Specific reaction: Carboxylic ester + H2O = an alcohol + carboxylate [C]
General reaction: Hydrolase; Acting on ester bonds; Carboxylic ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 2545531 [H]