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The map label for this gene is 99080290

Identifier: 99080290

GI number: 99080290

Start: 467439

End: 467813

Strand: Direct

Name: 99080290

Synonym: TM1040_0449

Alternate gene names: NA

Gene position: 467439-467813 (Clockwise)

Preceding gene: 99080289

Following gene: 99080291

Centisome position: 14.6

GC content: 61.87

Gene sequence:

>375_bases
ATGACGCAGGACGCACGCGCAAGAGGGCAGAACGCTCATTTTGCGGGCGCGGCTGCCGAAGAGATCGCGATCCGCGCCTA
TCTGGCGCGAGGTCTTACGCTTGTGAAGAGTCGCTGGCGCGGCCCGCATGGCGAAATCGATCTGATCCTTCGAGACGGAG
AGACCGTGATCTTCGCCGAAGTGAAATCCAGCACCACCCGCGACAAAGCCGCGGCACGCATCAAACCCGCGCAGATGCAG
CGGGTTTTCAACAGCGCGGGTGCCTTTCTTGAGGGCGAACCCTTGGGCCAACTGACTCCGGCGCGGTTGGATGTTGTGCT
GGTTTGGGGCGCGGGCGAGGTGGAGATTATCGAAAATGCCTATGGCCACGGCTGA

Upstream 100 bases:

>100_bases
AGGACGCAGCAGCGATTGTCGCCGAAGCCCATGGTGAGCCGCGACGCAAAATCTATCAACAAGCGCTGCAGATTGCGCGC
GAAGATCAAGGATAGAAGTC

Downstream 100 bases:

>100_bases
GCCATTGAACATGGCCAGCGCCTACGCCATGTATCTGTTGTGAAACAAGGGACACATATTATGAAAATCGCATTTCAGAT
GGACCCGATCATGGGCGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MTQDARARGQNAHFAGAAAEEIAIRAYLARGLTLVKSRWRGPHGEIDLILRDGETVIFAEVKSSTTRDKAAARIKPAQMQ
RVFNSAGAFLEGEPLGQLTPARLDVVLVWGAGEVEIIENAYGHG

Sequences:

>Translated_124_residues
MTQDARARGQNAHFAGAAAEEIAIRAYLARGLTLVKSRWRGPHGEIDLILRDGETVIFAEVKSSTTRDKAAARIKPAQMQ
RVFNSAGAFLEGEPLGQLTPARLDVVLVWGAGEVEIIENAYGHG
>Mature_123_residues
TQDARARGQNAHFAGAAAEEIAIRAYLARGLTLVKSRWRGPHGEIDLILRDGETVIFAEVKSSTTRDKAAARIKPAQMQR
VFNSAGAFLEGEPLGQLTPARLDVVLVWGAGEVEIIENAYGHG

Specific function: Unknown

COG id: COG0792

COG function: function code L; Predicted endonuclease distantly related to archaeal Holliday junction resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0102 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y449_SILST (Q1GJI4)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_612444.1
- STRING:   Q1GJI4
- GeneID:   4076092
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_0449
- NMPDR:   fig|292414.1.peg.2382
- eggNOG:   COG0792
- HOGENOM:   HBG710155
- OMA:   IREYESH
- BioCyc:   SSP292414:TM1040_0449-MONOMER
- HAMAP:   MF_00048
- InterPro:   IPR011856
- InterPro:   IPR011335
- InterPro:   IPR003509
- Gene3D:   G3DSA:3.40.1350.10

Pfam domain/function: PF02021 UPF0102; SSF52980 Restrict_endonuc_II-like_core

EC number: NA

Molecular weight: Translated: 13396; Mature: 13265

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQDARARGQNAHFAGAAAEEIAIRAYLARGLTLVKSRWRGPHGEIDLILRDGETVIFAE
CCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEE
VKSSTTRDKAAARIKPAQMQRVFNSAGAFLEGEPLGQLTPARLDVVLVWGAGEVEIIENA
CCCCCCCCHHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEEECCCCEEEECCC
YGHG
CCCC
>Mature Secondary Structure 
TQDARARGQNAHFAGAAAEEIAIRAYLARGLTLVKSRWRGPHGEIDLILRDGETVIFAE
CCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEEEEE
VKSSTTRDKAAARIKPAQMQRVFNSAGAFLEGEPLGQLTPARLDVVLVWGAGEVEIIENA
CCCCCCCCHHHHCCCHHHHHHHHHHCCCEECCCCCCCCCCCEEEEEEEECCCCEEEECCC
YGHG
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA