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The map label for this gene is 99080285

Identifier: 99080285

GI number: 99080285

Start: 460262

End: 460948

Strand: Direct

Name: 99080285

Synonym: TM1040_0444

Alternate gene names: NA

Gene position: 460262-460948 (Clockwise)

Preceding gene: 99080283

Following gene: 99080289

Centisome position: 14.38

GC content: 59.24

Gene sequence:

>687_bases
ATGCAAGATCAGAACCAATCTCCTTTTAACGCCCTGCCGCCAGTGGTGGTGGCTTTGGTGATCGTGATCATCGGTATCGA
GGCAATGTTTTCCTTCGGCGCCCGCGGCTACATCGGTGGCCCGGAGGCGGTGGGCTGGCGGCTGAACGCCCTGCAGGAAT
ACGGTTTTGGCGCGCAGTATTTCTGGTGGATGTGGGAAAACGGCACCTGGCCCTTTGATCTGCTGAAGCGTTTTGTCACC
TACGCCTTTGTGCACGGGGCCTTTACCCAGGCAGTTTTTGTCTGCGTGTTCCTTCTGGCCATGGGCAAGATGGTAGGCGA
AGCCATGGGTGAGATCGCCGTGGTGCTCATCTTTATCGGCTCTGCCATCGGAGGGGCCTTGGCCTATGCGCTGCTGGTCG
GCGGCAATGTGGCCCTGTTCGGGGGCTTTCCGGCGGTCTACGGGTTGATCGGCGGCTTTACCCATCTTTTGTGGCTATCA
CTTGCGACCGTCGGCGCGCAGCAATACCGCGCCTTCACGCTCATTGCGTTCTTGATGGGGGTGCAGTTGCTCTTTGGTCT
GATTTTTGGCGGCAGCCCGGAGTGGGTTGCCGATCTTGCGGGCTTTGTCACCGGGTTTGTGATGTCGTTCTTTCTGGTGC
CCGGTGGTTGGGCCCGCATCCTGCAGAAACTGCGTCAGGACCGGTGA

Upstream 100 bases:

>100_bases
GTCTGGAATTATGCACCATCGTCGCTTACCCATGGCGCAGAGTATCGTCAACAGGCGTAGACCCGTAGAGAGCGCGCCAG
AGCGCCGGAGAGCAGGACCA

Downstream 100 bases:

>100_bases
TCGGCGACCCCTGCGGTCAGGCTTTGCCGCGCCGCAGGGCAGATCTGAACTCCGACAGTCTGAATGCGCCGATGATCTGG
CCAATGGTGAAATAGGCCAC

Product: rhomboid-like protein

Products: NA

Alternate protein names: Rhomboid-Like Protein; Peptidase

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MQDQNQSPFNALPPVVVALVIVIIGIEAMFSFGARGYIGGPEAVGWRLNALQEYGFGAQYFWWMWENGTWPFDLLKRFVT
YAFVHGAFTQAVFVCVFLLAMGKMVGEAMGEIAVVLIFIGSAIGGALAYALLVGGNVALFGGFPAVYGLIGGFTHLLWLS
LATVGAQQYRAFTLIAFLMGVQLLFGLIFGGSPEWVADLAGFVTGFVMSFFLVPGGWARILQKLRQDR

Sequences:

>Translated_228_residues
MQDQNQSPFNALPPVVVALVIVIIGIEAMFSFGARGYIGGPEAVGWRLNALQEYGFGAQYFWWMWENGTWPFDLLKRFVT
YAFVHGAFTQAVFVCVFLLAMGKMVGEAMGEIAVVLIFIGSAIGGALAYALLVGGNVALFGGFPAVYGLIGGFTHLLWLS
LATVGAQQYRAFTLIAFLMGVQLLFGLIFGGSPEWVADLAGFVTGFVMSFFLVPGGWARILQKLRQDR
>Mature_228_residues
MQDQNQSPFNALPPVVVALVIVIIGIEAMFSFGARGYIGGPEAVGWRLNALQEYGFGAQYFWWMWENGTWPFDLLKRFVT
YAFVHGAFTQAVFVCVFLLAMGKMVGEAMGEIAVVLIFIGSAIGGALAYALLVGGNVALFGGFPAVYGLIGGFTHLLWLS
LATVGAQQYRAFTLIAFLMGVQLLFGLIFGGSPEWVADLAGFVTGFVMSFFLVPGGWARILQKLRQDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24772; Mature: 24772

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDQNQSPFNALPPVVVALVIVIIGIEAMFSFGARGYIGGPEAVGWRLNALQEYGFGAQY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
FWWMWENGTWPFDLLKRFVTYAFVHGAFTQAVFVCVFLLAMGKMVGEAMGEIAVVLIFIG
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIGGALAYALLVGGNVALFGGFPAVYGLIGGFTHLLWLSLATVGAQQYRAFTLIAFLMG
HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLLFGLIFGGSPEWVADLAGFVTGFVMSFFLVPGGWARILQKLRQDR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MQDQNQSPFNALPPVVVALVIVIIGIEAMFSFGARGYIGGPEAVGWRLNALQEYGFGAQY
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEE
FWWMWENGTWPFDLLKRFVTYAFVHGAFTQAVFVCVFLLAMGKMVGEAMGEIAVVLIFIG
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIGGALAYALLVGGNVALFGGFPAVYGLIGGFTHLLWLSLATVGAQQYRAFTLIAFLMG
HHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLLFGLIFGGSPEWVADLAGFVTGFVMSFFLVPGGWARILQKLRQDR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA