Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080283

Identifier: 99080283

GI number: 99080283

Start: 458711

End: 458974

Strand: Direct

Name: 99080283

Synonym: TM1040_0442

Alternate gene names: NA

Gene position: 458711-458974 (Clockwise)

Preceding gene: 99080282

Following gene: 99080285

Centisome position: 14.33

GC content: 63.64

Gene sequence:

>264_bases
ATGTCCAAGACGTCAGGACTCTTAGCGACACTCTTTGCGGCGAGCGTGCTTGTGGCGGGGTGCAGCGACAATCAAGACAT
CAACGCTGTGAGTGGCGCTCTCGCGGGTGCGGCTGTAGGCAACCAGGTTGGCTCTGGCAGCGGCAAGGTAGCCGCCACGC
TGATCGGTGGTGCGGTCGGCGCGCAGATCGGTGCCAATGCGCCGCGTCAATGTACCTATCGCAACAGCGCCGGGCAGACC
TACAAGGCCGCGTGCCCGTCGTAA

Upstream 100 bases:

>100_bases
CGGTCAACCATCACCGGCGGCGAGGAGCCGGGAGGCAGTGTGGCGCATATGATGCGGCTCCTCCCCTTCTGGCTCCGGTC
ATCAGAGAGGAGATGGATCA

Downstream 100 bases:

>100_bases
CCTTTGTGCGCAACATGCAGTCTGCCCGCAGCTGCTCTGGCGCAGAGAGTGTCGCGCAAACAAAGGCTTCGTGCAAAGAA
GAGGGCCGCCCAATCAAACG

Product: 17 kDa surface antigen

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 86

Protein sequence:

>87_residues
MSKTSGLLATLFAASVLVAGCSDNQDINAVSGALAGAAVGNQVGSGSGKVAATLIGGAVGAQIGANAPRQCTYRNSAGQT
YKAACPS

Sequences:

>Translated_87_residues
MSKTSGLLATLFAASVLVAGCSDNQDINAVSGALAGAAVGNQVGSGSGKVAATLIGGAVGAQIGANAPRQCTYRNSAGQT
YKAACPS
>Mature_86_residues
SKTSGLLATLFAASVLVAGCSDNQDINAVSGALAGAAVGNQVGSGSGKVAATLIGGAVGAQIGANAPRQCTYRNSAGQTY
KAACPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8287; Mature: 8156

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKTSGLLATLFAASVLVAGCSDNQDINAVSGALAGAAVGNQVGSGSGKVAATLIGGAVG
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH
AQIGANAPRQCTYRNSAGQTYKAACPS
HCCCCCCCCCCEECCCCCCEEECCCCC
>Mature Secondary Structure 
SKTSGLLATLFAASVLVAGCSDNQDINAVSGALAGAAVGNQVGSGSGKVAATLIGGAVG
CCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH
AQIGANAPRQCTYRNSAGQTYKAACPS
HCCCCCCCCCCEECCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA