Click here to switch to the map view.

The map label for this gene is 99080272

Identifier: 99080272

GI number: 99080272

Start: 442988

End: 444295

Strand: Reverse

Name: 99080272

Synonym: TM1040_0431

Alternate gene names: NA

Gene position: 444295-442988 (Counterclockwise)

Preceding gene: 99080273

Following gene: 99080271

Centisome position: 13.88

GC content: 60.78

Gene sequence:

>1308_bases
ATGTACCTGAGAAACGCACTTTGTGCGGCCTCTGCACTTGCGGTTATGGCAACTGGCGCCGTCCAGGCCGAGACCACATT
GACCATCGCGACCGTGAACAACGGCGACATGATCCGGATGCAGGGCCTCACTGACGACTTCACCGCCAAACATCCCGACA
TCCAGCTGGAGTGGGTCACGCTCGAAGAGAACGTGCTGCGTCAGCGCGTGACACAAGACATCGCCACCAACGGCGGCCAG
TTCGATGTGATGACCATCGGCATGTACGAAACCCCGATCTGGGCCGCTCAGAATTGGCTTGTGCCGCTGACCGACATGGG
GGCTGATTACGACGCGGACGACATCCTGCCCGCGATGCGCGCTGGCCTTTCACACAATGGCACTCTCTATGCCGCGCCGT
TTTACGGTGAAAGCTCCATGGTCATGTATCGCACCGACCTGATGGAGGCCGCGGGCCTGACAATGCCCGAAGCCCCCACA
TGGGAGTTCATCAAGGAAGCCGCCGCCGCGATGACAGACAAGGACGCCGAAATCTACGGCGCATGCCTGCGCGGCAAGGC
AGGATGGGGCGAGAACATGGCCTTCATCACCACCGTGGCGAACAGCTTTGGTGCGCGCTGGTTTGACGAAGACTGGACGC
CGCAGCTCGACAGCCCCGAGTGGAAAGAGGCGGTCACTTTCTACAACGATCTGCTGCAAAGCTACGGACCTCCGGGTGCC
TCTACAAATGGGTTCAACGAGAACCTCGCACTGTTCCAGCAAGGCAAGTGTGGCATGTGGATCGACGCGACTGTGGCGGC
CTCCTTCGTGACCAACCCCGACGATTCCACCGTCGCTGACAAGGTTGGATTTGCTCTGGCACCCGACACCGGCAAGGGCA
AACGGGCCAACTGGCTCTGGGCCTGGGCGCTGGCCGTGCCTGCGGGTTCTGACGCCAAGGATGAGGCCAAGGCATTCATC
GAATGGGCCACCTCCAAGGAGTATCTTGCGCTTGTGGCGGAAAACGAAGGTTGGGCCAATGTACCGCCTGGCAGCCGCAC
GTCGCTTTATGAGAACCCTGAATACGCCAAGGTTCCCTTTGCGCAGATGACGCTCGACTCGATCAATGCGGCGGACCCCA
ACAGCCCCACCGTGGATCCCGTGCCCTATGTGGGCATCCAGTATGTCGCGATCCCCGAATGGGCCGGCATCGGCACCAGC
GCAGGCCAGGAATTCTCGGCCATGGTCGCAGGTCAGCAAACCCCGGACGAAGCGCTTGCAAAAGCACAGGCTCTGGTCGC
TGACGAAATGGAAGCCGCAGGCTACTAA

Upstream 100 bases:

>100_bases
TTCGATGACTATTCTTTACGCGCGTAAATTTTTTATTGACGAATTCGCCTCCCTGCTCCTACCGTAAGGGCACAACATCC
AGACACTAGGGAGGAAACGG

Downstream 100 bases:

>100_bases
CCTCACTCCTCCTGGCCAGGGTTTCGCAACACGCGAGCCTTGGCCCTTTTTCACTCAATTGCAGCCTCGGAAGGGCCCGA
CCCGACCGATGAGGAGTCTC

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MYLRNALCAASALAVMATGAVQAETTLTIATVNNGDMIRMQGLTDDFTAKHPDIQLEWVTLEENVLRQRVTQDIATNGGQ
FDVMTIGMYETPIWAAQNWLVPLTDMGADYDADDILPAMRAGLSHNGTLYAAPFYGESSMVMYRTDLMEAAGLTMPEAPT
WEFIKEAAAAMTDKDAEIYGACLRGKAGWGENMAFITTVANSFGARWFDEDWTPQLDSPEWKEAVTFYNDLLQSYGPPGA
STNGFNENLALFQQGKCGMWIDATVAASFVTNPDDSTVADKVGFALAPDTGKGKRANWLWAWALAVPAGSDAKDEAKAFI
EWATSKEYLALVAENEGWANVPPGSRTSLYENPEYAKVPFAQMTLDSINAADPNSPTVDPVPYVGIQYVAIPEWAGIGTS
AGQEFSAMVAGQQTPDEALAKAQALVADEMEAAGY

Sequences:

>Translated_435_residues
MYLRNALCAASALAVMATGAVQAETTLTIATVNNGDMIRMQGLTDDFTAKHPDIQLEWVTLEENVLRQRVTQDIATNGGQ
FDVMTIGMYETPIWAAQNWLVPLTDMGADYDADDILPAMRAGLSHNGTLYAAPFYGESSMVMYRTDLMEAAGLTMPEAPT
WEFIKEAAAAMTDKDAEIYGACLRGKAGWGENMAFITTVANSFGARWFDEDWTPQLDSPEWKEAVTFYNDLLQSYGPPGA
STNGFNENLALFQQGKCGMWIDATVAASFVTNPDDSTVADKVGFALAPDTGKGKRANWLWAWALAVPAGSDAKDEAKAFI
EWATSKEYLALVAENEGWANVPPGSRTSLYENPEYAKVPFAQMTLDSINAADPNSPTVDPVPYVGIQYVAIPEWAGIGTS
AGQEFSAMVAGQQTPDEALAKAQALVADEMEAAGY
>Mature_435_residues
MYLRNALCAASALAVMATGAVQAETTLTIATVNNGDMIRMQGLTDDFTAKHPDIQLEWVTLEENVLRQRVTQDIATNGGQ
FDVMTIGMYETPIWAAQNWLVPLTDMGADYDADDILPAMRAGLSHNGTLYAAPFYGESSMVMYRTDLMEAAGLTMPEAPT
WEFIKEAAAAMTDKDAEIYGACLRGKAGWGENMAFITTVANSFGARWFDEDWTPQLDSPEWKEAVTFYNDLLQSYGPPGA
STNGFNENLALFQQGKCGMWIDATVAASFVTNPDDSTVADKVGFALAPDTGKGKRANWLWAWALAVPAGSDAKDEAKAFI
EWATSKEYLALVAENEGWANVPPGSRTSLYENPEYAKVPFAQMTLDSINAADPNSPTVDPVPYVGIQYVAIPEWAGIGTS
AGQEFSAMVAGQQTPDEALAKAQALVADEMEAAGY

Specific function: Probably part of the binding-protein-dependent transport system y4oPQRS. This system probably transports a sugar-like molecule [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47002; Mature: 47002

Theoretical pI: Translated: 3.92; Mature: 3.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLRNALCAASALAVMATGAVQAETTLTIATVNNGDMIRMQGLTDDFTAKHPDIQLEWVT
CCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEE
LEENVLRQRVTQDIATNGGQFDVMTIGMYETPIWAAQNWLVPLTDMGADYDADDILPAMR
CHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHCCCCEEEHHCCCCCCCHHHHHHHHH
AGLSHNGTLYAAPFYGESSMVMYRTDLMEAAGLTMPEAPTWEFIKEAAAAMTDKDAEIYG
HCCCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
ACLRGKAGWGENMAFITTVANSFGARWFDEDWTPQLDSPEWKEAVTFYNDLLQSYGPPGA
HHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
STNGFNENLALFQQGKCGMWIDATVAASFVTNPDDSTVADKVGFALAPDTGKGKRANWLW
CCCCCCCCEEEEECCCCCEEEEHHHHHHEECCCCCCHHHHHCCEEECCCCCCCCCCCEEE
AWALAVPAGSDAKDEAKAFIEWATSKEYLALVAENEGWANVPPGSRTSLYENPEYAKVPF
EEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
AQMTLDSINAADPNSPTVDPVPYVGIQYVAIPEWAGIGTSAGQEFSAMVAGQQTPDEALA
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHH
KAQALVADEMEAAGY
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MYLRNALCAASALAVMATGAVQAETTLTIATVNNGDMIRMQGLTDDFTAKHPDIQLEWVT
CCCHHHHHHHHHHHHHHCCCEEEEEEEEEEEECCCCEEEECCCCCCCCCCCCCEEEEEEE
LEENVLRQRVTQDIATNGGQFDVMTIGMYETPIWAAQNWLVPLTDMGADYDADDILPAMR
CHHHHHHHHHHHHHHCCCCEEEEEEEEEECCCCHHCCCCEEEHHCCCCCCCHHHHHHHHH
AGLSHNGTLYAAPFYGESSMVMYRTDLMEAAGLTMPEAPTWEFIKEAAAAMTDKDAEIYG
HCCCCCCEEEEEEECCCCCEEEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCHHHHH
ACLRGKAGWGENMAFITTVANSFGARWFDEDWTPQLDSPEWKEAVTFYNDLLQSYGPPGA
HHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
STNGFNENLALFQQGKCGMWIDATVAASFVTNPDDSTVADKVGFALAPDTGKGKRANWLW
CCCCCCCCEEEEECCCCCEEEEHHHHHHEECCCCCCHHHHHCCEEECCCCCCCCCCCEEE
AWALAVPAGSDAKDEAKAFIEWATSKEYLALVAENEGWANVPPGSRTSLYENPEYAKVPF
EEEEECCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCH
AQMTLDSINAADPNSPTVDPVPYVGIQYVAIPEWAGIGTSAGQEFSAMVAGQQTPDEALA
HHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHH
KAQALVADEMEAAGY
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]