| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is mtlK [H]
Identifier: 99080267
GI number: 99080267
Start: 437908
End: 439386
Strand: Reverse
Name: mtlK [H]
Synonym: TM1040_0426
Alternate gene names: 99080267
Gene position: 439386-437908 (Counterclockwise)
Preceding gene: 99080268
Following gene: 99080262
Centisome position: 13.73
GC content: 62.61
Gene sequence:
>1479_bases ATGACCTCGCTGCGCCTTTCAAACGACACTCTCTCGGATTTGCCCAAACATATCACGCGCCCGACCTATGATCGCGCGGC GCTGACGGCGGGCATCCTTCACATCGGGCTTGGCAATTTTCACCGTGCCCATCAAAGCTGGTACTTGCACAGACTGATGC AGCAGGGCGAGGCCCAGGATTGGGCCATCATCGGCGCTGGCGTGCGCGACTATGACGCCGCGATGCGCGCGCGCCTCAAG GCGCAGGACTGTCTCACCACCCTGATCGCTCTCTCCCCTGACACCACGTCCGCCGAGGTGGTTGGCTCTATGATCGACTA CCTGCCGATCGAGGCTGACAATGGCGCGCTGATTGCGGCCATGGCCCGCCCCGAGATCCGCATTGTCTCCATGACGGTGA CCGAAGGCGGGTATTACCGGGATCCGGTCTCGGGCGCGTTTGATGACACACATCCGGATATCCTGCACGATATTGCCAAT CCAAGCACCCCGCGCACCGTGTTCGGCGCGATCATTGCGGCCCTTGCGCTGCGCCGCACCGCCGGTGTTGGGCCGTTCTC TGTACAAAGTTGCGACAACCTGCAGGGCAATGGCGATGTCACCCGCCAGACCGTGCTTGGCCTGGCCCGTCGCAGCGATC CAGAGCTCGCAAGCTGGATTGCGGCGCAATGCACGTTTCCCAATTCCATGGTCGATTGCATTGTCCCCGCAACCGGCCCG GCAGAGATAGCGCTTGCTGCGGAAATGGGCGTCGCCGATCAGGCCCCCGTCACCCATGAGCCCTATCGCCAATGGGTGAT CGAGGACAATTTCTGCGCCGGGCGTCCGGATTGGGACAAGGTCGGGGCGACCTTCACCAATCAGGTCCACGCCTATGAGA CGATGAAGATCCGTATCCTGAACGCCGGGCACCAGGTCATCGCCAATGCGGGCGAGCTATTGTCCTGTGAGACGATCGCG GACTGCATGCAGGATCCCGACATTCGGTCCATGTTCGAGAAGGTGGAGACCCAAGAGATCGCGCCCTATGTATCGCCGGT GCCTGGCATCACAGCGGACGCTTATGTGGCGTTGATTGCGGACCGGTTCTCGAACCCAGCCATCCACGACACCACCCGGC GGGTGGCGTTCGACGGCTCTTCACGGCACGCGGGCTTTATCCTGCCGATCCTGCGTGACGCGCTGGCTGCGCGGGGTCCG GTCGATGGTCTCGCTCTGGTCGAGGCCCTCTGGGCGCGGATGTGCGCTGGGCTGCGCGAAGACGGAACCGAGATCGAAGC CAATGACCCCAACTGGCCGCAGTTGCAACAAGCGGCGCAGGCCGCAAGGACCGCCCCCGAGGTCTGGCTGGCGCAGTCCG AATATTACGGAGATCTCGCTCAGGAGACGCACTTTGCGGACCGGTTCTGCCACTGGCATGCACTGATCTGGAGCAAAGGA ACACGCGAGGCGCTCCGTTCCTACACGACTCAGATTTGA
Upstream 100 bases:
>100_bases CAGATGATCTGACCGGTATGGCGATCTTTCTCGCCAGCGCTGAGGCCGACTATGTGGTGTCGCAGACCTATAACGTCGAC GGCGGAAACTGGATGAGCTG
Downstream 100 bases:
>100_bases CCTCGCGCGCCCCGGGCTGGGGCGCGCCACCTAGCAGGTGGGCGTTTCAGTCAGATCGCTCAATCCCAGATCACCAAGGG ATTTGAGCGCGGATTTGTTT
Product: mannitol dehydrogenase-like
Products: NA
Alternate protein names: M2DH; MDH [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTSLRLSNDTLSDLPKHITRPTYDRAALTAGILHIGLGNFHRAHQSWYLHRLMQQGEAQDWAIIGAGVRDYDAAMRARLK AQDCLTTLIALSPDTTSAEVVGSMIDYLPIEADNGALIAAMARPEIRIVSMTVTEGGYYRDPVSGAFDDTHPDILHDIAN PSTPRTVFGAIIAALALRRTAGVGPFSVQSCDNLQGNGDVTRQTVLGLARRSDPELASWIAAQCTFPNSMVDCIVPATGP AEIALAAEMGVADQAPVTHEPYRQWVIEDNFCAGRPDWDKVGATFTNQVHAYETMKIRILNAGHQVIANAGELLSCETIA DCMQDPDIRSMFEKVETQEIAPYVSPVPGITADAYVALIADRFSNPAIHDTTRRVAFDGSSRHAGFILPILRDALAARGP VDGLALVEALWARMCAGLREDGTEIEANDPNWPQLQQAAQAARTAPEVWLAQSEYYGDLAQETHFADRFCHWHALIWSKG TREALRSYTTQI
Sequences:
>Translated_492_residues MTSLRLSNDTLSDLPKHITRPTYDRAALTAGILHIGLGNFHRAHQSWYLHRLMQQGEAQDWAIIGAGVRDYDAAMRARLK AQDCLTTLIALSPDTTSAEVVGSMIDYLPIEADNGALIAAMARPEIRIVSMTVTEGGYYRDPVSGAFDDTHPDILHDIAN PSTPRTVFGAIIAALALRRTAGVGPFSVQSCDNLQGNGDVTRQTVLGLARRSDPELASWIAAQCTFPNSMVDCIVPATGP AEIALAAEMGVADQAPVTHEPYRQWVIEDNFCAGRPDWDKVGATFTNQVHAYETMKIRILNAGHQVIANAGELLSCETIA DCMQDPDIRSMFEKVETQEIAPYVSPVPGITADAYVALIADRFSNPAIHDTTRRVAFDGSSRHAGFILPILRDALAARGP VDGLALVEALWARMCAGLREDGTEIEANDPNWPQLQQAAQAARTAPEVWLAQSEYYGDLAQETHFADRFCHWHALIWSKG TREALRSYTTQI >Mature_491_residues TSLRLSNDTLSDLPKHITRPTYDRAALTAGILHIGLGNFHRAHQSWYLHRLMQQGEAQDWAIIGAGVRDYDAAMRARLKA QDCLTTLIALSPDTTSAEVVGSMIDYLPIEADNGALIAAMARPEIRIVSMTVTEGGYYRDPVSGAFDDTHPDILHDIANP STPRTVFGAIIAALALRRTAGVGPFSVQSCDNLQGNGDVTRQTVLGLARRSDPELASWIAAQCTFPNSMVDCIVPATGPA EIALAAEMGVADQAPVTHEPYRQWVIEDNFCAGRPDWDKVGATFTNQVHAYETMKIRILNAGHQVIANAGELLSCETIAD CMQDPDIRSMFEKVETQEIAPYVSPVPGITADAYVALIADRFSNPAIHDTTRRVAFDGSSRHAGFILPILRDALAARGPV DGLALVEALWARMCAGLREDGTEIEANDPNWPQLQQAAQAARTAPEVWLAQSEYYGDLAQETHFADRFCHWHALIWSKGT REALRSYTTQI
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG0246
COG function: function code G; Mannitol-1-phosphate/altronate dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mannitol dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1790779, Length=480, Percent_Identity=39.7916666666667, Blast_Score=325, Evalue=5e-90, Organism=Escherichia coli, GI1787823, Length=492, Percent_Identity=37.3983739837398, Blast_Score=297, Evalue=9e-82, Organism=Escherichia coli, GI1788497, Length=457, Percent_Identity=35.8862144420131, Blast_Score=288, Evalue=6e-79, Organism=Escherichia coli, GI48994885, Length=499, Percent_Identity=23.0460921843687, Blast_Score=96, Evalue=7e-21, Organism=Escherichia coli, GI1790028, Length=198, Percent_Identity=29.2929292929293, Blast_Score=68, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324401, Length=495, Percent_Identity=35.7575757575758, Blast_Score=338, Evalue=1e-93, Organism=Saccharomyces cerevisiae, GI6320765, Length=495, Percent_Identity=35.7575757575758, Blast_Score=338, Evalue=1e-93,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008927 - InterPro: IPR013328 - InterPro: IPR000669 - InterPro: IPR013118 - InterPro: IPR023027 - InterPro: IPR013131 - InterPro: IPR016040 [H]
Pfam domain/function: PF01232 Mannitol_dh; PF08125 Mannitol_dh_C [H]
EC number: =1.1.1.67 [H]
Molecular weight: Translated: 53760; Mature: 53629
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSLRLSNDTLSDLPKHITRPTYDRAALTAGILHIGLGNFHRAHQSWYLHRLMQQGEAQD CCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC WAIIGAGVRDYDAAMRARLKAQDCLTTLIALSPDTTSAEVVGSMIDYLPIEADNGALIAA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCEEEE MARPEIRIVSMTVTEGGYYRDPVSGAFDDTHPDILHDIANPSTPRTVFGAIIAALALRRT ECCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AGVGPFSVQSCDNLQGNGDVTRQTVLGLARRSDPELASWIAAQCTFPNSMVDCIVPATGP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEECCCCC AEIALAAEMGVADQAPVTHEPYRQWVIEDNFCAGRPDWDKVGATFTNQVHAYETMKIRIL CCEEEEHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCHHHHCCHHHCCEEEEEEEEEEEE NAGHQVIANAGELLSCETIADCMQDPDIRSMFEKVETQEIAPYVSPVPGITADAYVALIA CCCHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH DRFSNPAIHDTTRRVAFDGSSRHAGFILPILRDALAARGPVDGLALVEALWARMCAGLRE HHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC DGTEIEANDPNWPQLQQAAQAARTAPEVWLAQSEYYGDLAQETHFADRFCHWHALIWSKG CCCEECCCCCCCHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC TREALRSYTTQI HHHHHHHHHCCC >Mature Secondary Structure TSLRLSNDTLSDLPKHITRPTYDRAALTAGILHIGLGNFHRAHQSWYLHRLMQQGEAQD CCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC WAIIGAGVRDYDAAMRARLKAQDCLTTLIALSPDTTSAEVVGSMIDYLPIEADNGALIAA EEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCEECCCCCEEEE MARPEIRIVSMTVTEGGYYRDPVSGAFDDTHPDILHDIANPSTPRTVFGAIIAALALRRT ECCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHH AGVGPFSVQSCDNLQGNGDVTRQTVLGLARRSDPELASWIAAQCTFPNSMVDCIVPATGP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHEEECCCCC AEIALAAEMGVADQAPVTHEPYRQWVIEDNFCAGRPDWDKVGATFTNQVHAYETMKIRIL CCEEEEHHCCCCCCCCCCCCHHHHHEECCCCCCCCCCHHHHCCHHHCCEEEEEEEEEEEE NAGHQVIANAGELLSCETIADCMQDPDIRSMFEKVETQEIAPYVSPVPGITADAYVALIA CCCHHHHHCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHH DRFSNPAIHDTTRRVAFDGSSRHAGFILPILRDALAARGPVDGLALVEALWARMCAGLRE HHCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCC DGTEIEANDPNWPQLQQAAQAARTAPEVWLAQSEYYGDLAQETHFADRFCHWHALIWSKG CCCEECCCCCCCHHHHHHHHHHHCCCHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCC TREALRSYTTQI HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8254318 [H]