Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is yedP [C]

Identifier: 99080262

GI number: 99080262

Start: 431975

End: 432754

Strand: Reverse

Name: yedP [C]

Synonym: TM1040_0421

Alternate gene names: 99080262

Gene position: 432754-431975 (Counterclockwise)

Preceding gene: 99080267

Following gene: 99080261

Centisome position: 13.52

GC content: 62.56

Gene sequence:

>780_bases
ATGCCCCGGCTGCTTGTTTTTAGTGATCTTGATGGCACCTTGCTGGATCACACGACCTACAGCCATGCCGCCGCTCAACC
GGCCTTGTCCGCGCTGCGCAGCCGCGATGCAGTGTTGATCCTGGCAAGCTCCAAGACCGCGGTCGAAATGCTGCCGCTGC
ATCAGGAACTCGGGCTGGGAGACGCCCCAATGATCGTCGAGAACGGATCCGCCTGTCAGCGCCCGACAGAGATCGACAGT
GACCCGGCCACCTACAACAAACTGCGCAGGCTTCTCACGCGGCTCGAGATGCCCTTTGAAGGCTTTGGCGATATGTCCAC
GCAAAAGGTTGCCGCCCTCACGGGCCTCAGCGATGAGGGCGCAGTGCGCGCCAAGACGCGCCAGTTCAGCGAACCCGGCA
TCTGGCATGGCACCCCTGCTCAGAAAGACGCGTTCCTTGCCGCACTGGCCCGCGAAGGGGTCACCGCGCGCCAAGGGGGG
CGGTTCCTCACGCTCTCTTATGGCGCCACCAAGGCACAGCAGATGCAAAAGATCCGCCAGCAACACGCCCCCTGCTTCAC
CGTCGCCCTTGGCGATGCCCCCAATGACGCGGAAATGATCGCCACCGCCGATATTGGCGTCATTGTACGCAACGATCATG
GTCCGGATATGCCCGCGATCCCGCCTGAGCACCGGATCATGCACACGCAACAGGAGGGTCCAAAAGGCTGGAACGCGGCC
ATGCTGCAGATCCTCAGCGAATGGGACCACGACCACAAAGGAGCCGCAGCGCATGGCTGA

Upstream 100 bases:

>100_bases
AGCACGCCCCGCGACCTTTGCCCAGATACCCGGCGCTCCTTAGGCTTGGGGAACAGTTCACGCACGGCCTTGTCGCGCCG
TCTTGCAGGAAGGCCCCGTC

Downstream 100 bases:

>100_bases
CTTCCACCAGAATGGCAATATCGCCCAATTCCACAACCTGCGCAGCCGCCCGGTCGAGGAGCTGGAGTATGAGCTCACTA
CCTTTGCCCAGACCCGCAAG

Product: mannosyl-3-phosphoglycerate phosphatase

Products: NA

Alternate protein names: MPGP [H]

Number of amino acids: Translated: 259; Mature: 258

Protein sequence:

>259_residues
MPRLLVFSDLDGTLLDHTTYSHAAAQPALSALRSRDAVLILASSKTAVEMLPLHQELGLGDAPMIVENGSACQRPTEIDS
DPATYNKLRRLLTRLEMPFEGFGDMSTQKVAALTGLSDEGAVRAKTRQFSEPGIWHGTPAQKDAFLAALAREGVTARQGG
RFLTLSYGATKAQQMQKIRQQHAPCFTVALGDAPNDAEMIATADIGVIVRNDHGPDMPAIPPEHRIMHTQQEGPKGWNAA
MLQILSEWDHDHKGAAAHG

Sequences:

>Translated_259_residues
MPRLLVFSDLDGTLLDHTTYSHAAAQPALSALRSRDAVLILASSKTAVEMLPLHQELGLGDAPMIVENGSACQRPTEIDS
DPATYNKLRRLLTRLEMPFEGFGDMSTQKVAALTGLSDEGAVRAKTRQFSEPGIWHGTPAQKDAFLAALAREGVTARQGG
RFLTLSYGATKAQQMQKIRQQHAPCFTVALGDAPNDAEMIATADIGVIVRNDHGPDMPAIPPEHRIMHTQQEGPKGWNAA
MLQILSEWDHDHKGAAAHG
>Mature_258_residues
PRLLVFSDLDGTLLDHTTYSHAAAQPALSALRSRDAVLILASSKTAVEMLPLHQELGLGDAPMIVENGSACQRPTEIDSD
PATYNKLRRLLTRLEMPFEGFGDMSTQKVAALTGLSDEGAVRAKTRQFSEPGIWHGTPAQKDAFLAALAREGVTARQGGR
FLTLSYGATKAQQMQKIRQQHAPCFTVALGDAPNDAEMIATADIGVIVRNDHGPDMPAIPPEHRIMHTQQEGPKGWNAAM
LQILSEWDHDHKGAAAHG

Specific function: Unknown

COG id: COG3769

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. MPGP family [H]

Homologues:

Organism=Escherichia coli, GI1788265, Length=263, Percent_Identity=35.361216730038, Blast_Score=123, Evalue=1e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR006381
- InterPro:   IPR012815 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: =3.1.3.70 [H]

Molecular weight: Translated: 28016; Mature: 27885

Theoretical pI: Translated: 6.44; Mature: 6.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLLVFSDLDGTLLDHTTYSHAAAQPALSALRSRDAVLILASSKTAVEMLPLHQELGLG
CCCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHCCHHHCCCC
DAPMIVENGSACQRPTEIDSDPATYNKLRRLLTRLEMPFEGFGDMSTQKVAALTGLSDEG
CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC
AVRAKTRQFSEPGIWHGTPAQKDAFLAALAREGVTARQGGRFLTLSYGATKAQQMQKIRQ
CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCEEEEECCCHHHHHHHHHHH
QHAPCFTVALGDAPNDAEMIATADIGVIVRNDHGPDMPAIPPEHRIMHTQQEGPKGWNAA
HCCCEEEEEECCCCCCCEEEEEECEEEEEECCCCCCCCCCCCHHHEEECCCCCCCCHHHH
MLQILSEWDHDHKGAAAHG
HHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
PRLLVFSDLDGTLLDHTTYSHAAAQPALSALRSRDAVLILASSKTAVEMLPLHQELGLG
CCEEEEECCCCCEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCEEHHHCCHHHCCCC
DAPMIVENGSACQRPTEIDSDPATYNKLRRLLTRLEMPFEGFGDMSTQKVAALTGLSDEG
CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCC
AVRAKTRQFSEPGIWHGTPAQKDAFLAALAREGVTARQGGRFLTLSYGATKAQQMQKIRQ
CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCCCEEEEECCCHHHHHHHHHHH
QHAPCFTVALGDAPNDAEMIATADIGVIVRNDHGPDMPAIPPEHRIMHTQQEGPKGWNAA
HCCCEEEEEECCCCCCCEEEEEECEEEEEECCCCCCCCCCCCHHHEEECCCCCCCCHHHH
MLQILSEWDHDHKGAAAHG
HHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA