| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080261
Identifier: 99080261
GI number: 99080261
Start: 430753
End: 431982
Strand: Reverse
Name: 99080261
Synonym: TM1040_0420
Alternate gene names: NA
Gene position: 431982-430753 (Counterclockwise)
Preceding gene: 99080262
Following gene: 99080258
Centisome position: 13.5
GC content: 60.41
Gene sequence:
>1230_bases ATGGCTGACTTCCACCAGAATGGCAATATCGCCCAATTCCACAACCTGCGCAGCCGCCCGGTCGAGGAGCTGGAGTATGA GCTCACTACCTTTGCCCAGACCCGCAAGATCTCCTTGATCCTACCCTGCCTCTATTCCGAACTCGAAGGCCCGGCCCTGC GCCCGATCCTCGACGAACTCGCCCGTGTTCCCTACCTCCATCACATCGTAATCGGCTTGGATCGCGCCAGCGAGGCCGAA TACCGCCACGCCCGTACCTATTTTGCCTCCCTGCCCCAAAGCCACCGCGTCCTGTGGAATGACAGCCCCCGCATGAAGCA GCTGGGCGCGCGTCTGGCTGCACAGGGGCTCGCGCCGCCCGAGCCGGGCAAGGGCAAGAATGTCTGGTCCTGCATCGGCT ATCTTCTGGCCCAGGCCGAAAGCTCGGTGGTCGCGATCCACGATTGCGACATCAGCACCTACTCCAAGGAGATGCTGGCA CGGCTGGTTTATCCCGTGGCGCATCCCGCCTTCTCCTATCAGCTCTCAAAAGGGTTTTATGCGCGGGTGGGCGGCGGCAA ACTCAATGGTCGTGTCTCGCGCCTGCTGGTCTCGCCGCTGTTGATCGCGCTGAAGCGCACCATCGGAGATCGCGACTATA TCGACTACCTGCGCAGCTTTCGCTACCCGCTCTCGGGGGAGATGGCCCTGCGCGCACCACTTTTGCCGGACCTGCGCATC CCGTCCGATTGGGGGCTGGAGATCGGCGTTCTGTCCGAAGCCTGGCGCAATCTTGGCCGCAAAGCCGTTTGTCAGGTGGA GATCGCCGACAACTACGACCACAAACACCAGTCCCTCAGCCCCGAAGATGCCTCTGCGGGGCTCAACCGCATGTCAACAG ACATCTGCAAGGCGATCTTTCGCAAGCTCGCCGCCGACGGCACGGTCTTCACCCCCAATGTCTTTCGCACCCTCAAGGCC ACCTATTATCGCTCGGCCCTTGATCTGCTGGAAGCCTATGCCCACGACGCCATGATGAATGGCCTCGCTCTGGATCGCCA CGGCGAAGAAAAAATGGTCGAAATGTTTGCAAACAACATCATGGCCGCCGGGCAGGTGTTTCTGGAAAACCCCCATGAAA CCCCTTTCATTCCAAACTGGAACCGCATCCACTCGGCAAATCCGACCTTTCTGCAGGATCTCAAGGCTGCAGCGCTTGCG GATGAGGCCGAATACAGCCCAAGTCCCTGA
Upstream 100 bases:
>100_bases CGGATCATGCACACGCAACAGGAGGGTCCAAAAGGCTGGAACGCGGCCATGCTGCAGATCCTCAGCGAATGGGACCACGA CCACAAAGGAGCCGCAGCGC
Downstream 100 bases:
>100_bases CCCCTGCCCAAGGAGCGCCGCAGCTACAAGAGCCGGCGCCCCCAAAGGATCAATATGTCACTGCCCCCGCTCTGCGCCGC ACCTCCAAAAAAGGCGAAGC
Product: cell wall biogenesis glycosyltransferase
Products: NA
Alternate protein names: Glycosyltransferase-Like Protein; Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; Glycosyltransferase Family Protein; Glycosyl Transferase Family 2 Protein; Glucosyl-3-Phosphoglycerate Synthase; Glycosyltransferase Group; Cell Wall Biosynthesis Glycosyltransferase
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MADFHQNGNIAQFHNLRSRPVEELEYELTTFAQTRKISLILPCLYSELEGPALRPILDELARVPYLHHIVIGLDRASEAE YRHARTYFASLPQSHRVLWNDSPRMKQLGARLAAQGLAPPEPGKGKNVWSCIGYLLAQAESSVVAIHDCDISTYSKEMLA RLVYPVAHPAFSYQLSKGFYARVGGGKLNGRVSRLLVSPLLIALKRTIGDRDYIDYLRSFRYPLSGEMALRAPLLPDLRI PSDWGLEIGVLSEAWRNLGRKAVCQVEIADNYDHKHQSLSPEDASAGLNRMSTDICKAIFRKLAADGTVFTPNVFRTLKA TYYRSALDLLEAYAHDAMMNGLALDRHGEEKMVEMFANNIMAAGQVFLENPHETPFIPNWNRIHSANPTFLQDLKAAALA DEAEYSPSP
Sequences:
>Translated_409_residues MADFHQNGNIAQFHNLRSRPVEELEYELTTFAQTRKISLILPCLYSELEGPALRPILDELARVPYLHHIVIGLDRASEAE YRHARTYFASLPQSHRVLWNDSPRMKQLGARLAAQGLAPPEPGKGKNVWSCIGYLLAQAESSVVAIHDCDISTYSKEMLA RLVYPVAHPAFSYQLSKGFYARVGGGKLNGRVSRLLVSPLLIALKRTIGDRDYIDYLRSFRYPLSGEMALRAPLLPDLRI PSDWGLEIGVLSEAWRNLGRKAVCQVEIADNYDHKHQSLSPEDASAGLNRMSTDICKAIFRKLAADGTVFTPNVFRTLKA TYYRSALDLLEAYAHDAMMNGLALDRHGEEKMVEMFANNIMAAGQVFLENPHETPFIPNWNRIHSANPTFLQDLKAAALA DEAEYSPSP >Mature_408_residues ADFHQNGNIAQFHNLRSRPVEELEYELTTFAQTRKISLILPCLYSELEGPALRPILDELARVPYLHHIVIGLDRASEAEY RHARTYFASLPQSHRVLWNDSPRMKQLGARLAAQGLAPPEPGKGKNVWSCIGYLLAQAESSVVAIHDCDISTYSKEMLAR LVYPVAHPAFSYQLSKGFYARVGGGKLNGRVSRLLVSPLLIALKRTIGDRDYIDYLRSFRYPLSGEMALRAPLLPDLRIP SDWGLEIGVLSEAWRNLGRKAVCQVEIADNYDHKHQSLSPEDASAGLNRMSTDICKAIFRKLAADGTVFTPNVFRTLKAT YYRSALDLLEAYAHDAMMNGLALDRHGEEKMVEMFANNIMAAGQVFLENPHETPFIPNWNRIHSANPTFLQDLKAAALAD EAEYSPSP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45836; Mature: 45705
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADFHQNGNIAQFHNLRSRPVEELEYELTTFAQTRKISLILPCLYSELEGPALRPILDEL CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ARVPYLHHIVIGLDRASEAEYRHARTYFASLPQSHRVLWNDSPRMKQLGARLAAQGLAPP HHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCC EPGKGKNVWSCIGYLLAQAESSVVAIHDCDISTYSKEMLARLVYPVAHPAFSYQLSKGFY CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCE ARVGGGKLNGRVSRLLVSPLLIALKRTIGDRDYIDYLRSFRYPLSGEMALRAPLLPDLRI EEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCC PSDWGLEIGVLSEAWRNLGRKAVCQVEIADNYDHKHQSLSPEDASAGLNRMSTDICKAIF CCCCCCEEHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH RKLAADGTVFTPNVFRTLKATYYRSALDLLEAYAHDAMMNGLALDRHGEEKMVEMFANNI HHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MAAGQVFLENPHETPFIPNWNRIHSANPTFLQDLKAAALADEAEYSPSP HHHCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure ADFHQNGNIAQFHNLRSRPVEELEYELTTFAQTRKISLILPCLYSELEGPALRPILDEL CCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH ARVPYLHHIVIGLDRASEAEYRHARTYFASLPQSHRVLWNDSPRMKQLGARLAAQGLAPP HHCCHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHCCCCCC EPGKGKNVWSCIGYLLAQAESSVVAIHDCDISTYSKEMLARLVYPVAHPAFSYQLSKGFY CCCCCCHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHCCCCE ARVGGGKLNGRVSRLLVSPLLIALKRTIGDRDYIDYLRSFRYPLSGEMALRAPLLPDLRI EEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCEEECCCCCCCCC PSDWGLEIGVLSEAWRNLGRKAVCQVEIADNYDHKHQSLSPEDASAGLNRMSTDICKAIF CCCCCCEEHHHHHHHHHCCCCEEEEEEECCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHH RKLAADGTVFTPNVFRTLKATYYRSALDLLEAYAHDAMMNGLALDRHGEEKMVEMFANNI HHHHCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH MAAGQVFLENPHETPFIPNWNRIHSANPTFLQDLKAAALADEAEYSPSP HHHCHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA