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The map label for this gene is 99080231

Identifier: 99080231

GI number: 99080231

Start: 398118

End: 398918

Strand: Reverse

Name: 99080231

Synonym: TM1040_0390

Alternate gene names: NA

Gene position: 398918-398118 (Counterclockwise)

Preceding gene: 99080233

Following gene: 99080229

Centisome position: 12.46

GC content: 62.3

Gene sequence:

>801_bases
ATGCGCACCGCTTTTAGCCAGAACCTGCGTTTTCTCTGCGCCGAGACTCCCTCGATTGCGCAGACCTGCCGCGACATCGG
CCTCAACCGACAGCAGTTCAATCGCTATCTTTCCGGAGCAGGCCTGCCTTCGGCACATAACCTGCGCCGCATCGCCCGCC
ATTTTGATGTTCCGGAGGCCGATCTGTTCACAAACCCCGATCAATTTGCAGCCGCGCGTCGCCCCAAGCGCAGCCCCCAA
TTGCCCGCTCCACTGTTTCATCTCGGGACAGGCTTTGCCGATCAGGCGCGAATCTTGCGCCGTTTCTTGGGCAGTTATCA
TGGCTATTTCACCACCCCGACCTGGCCCGGGCAGGTGCTTCGCACGCTCATTCATCTCCGGGACGTCGACGGCTATGTCA
CGAGCCACACGTTCGAGCGCGCCCGCTCGCTGGATGGCAGCATCCACCAGCGCAGCAGCTATCGCGGCCTGGTCGCAGAA
CGTGGTGGTCGGCTCTGCTTACTAGAGCGCCCCCGCAATGCCGTCGGCGCGCTCTCAGAAACGATCCTAATGCCCGAGCA
CCCGCATCAGATCTCGTACCTGCAGGGTCTGGTGCTCGGAGTCTCTGCAGGCGCAAACCGCCGACCTTTTTCCACCCGCA
CCGTCTGGGTCAGGATCGAAGAAAAGACTTCTGCCCGCGCAGCACTTGCCGCCACGGGCACCCTGGCCAAGGACAGCCCG
CGCCTTGACCCCAAAGTGCGGCGCCTCCTCGGAGATGACTCGCCGCTCAGTATCGTATCGGACCTCTTGGCACCCAGTTA
A

Upstream 100 bases:

>100_bases
TGCAAACTCTGCGCGAAATGTCGGGCCGGGGAAACTGCGCGCTTGTACGCGACATGATGCATATGTACGCAAGGTAGCAT
CACATCGCGAAGGATGAGAC

Downstream 100 bases:

>100_bases
TCTTTCTCGGGCTTCGTGTCGCGCGGCAGGACGGGGGCCGAGCGGTCAAGCGCCAGGTCCGCGTCAGAAAATACCCAAGG
CCCCCGCACGCCTGGCACGC

Product: hypothetical protein

Products: NA

Alternate protein names: Cro/CI Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator Protein; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MRTAFSQNLRFLCAETPSIAQTCRDIGLNRQQFNRYLSGAGLPSAHNLRRIARHFDVPEADLFTNPDQFAAARRPKRSPQ
LPAPLFHLGTGFADQARILRRFLGSYHGYFTTPTWPGQVLRTLIHLRDVDGYVTSHTFERARSLDGSIHQRSSYRGLVAE
RGGRLCLLERPRNAVGALSETILMPEHPHQISYLQGLVLGVSAGANRRPFSTRTVWVRIEEKTSARAALAATGTLAKDSP
RLDPKVRRLLGDDSPLSIVSDLLAPS

Sequences:

>Translated_266_residues
MRTAFSQNLRFLCAETPSIAQTCRDIGLNRQQFNRYLSGAGLPSAHNLRRIARHFDVPEADLFTNPDQFAAARRPKRSPQ
LPAPLFHLGTGFADQARILRRFLGSYHGYFTTPTWPGQVLRTLIHLRDVDGYVTSHTFERARSLDGSIHQRSSYRGLVAE
RGGRLCLLERPRNAVGALSETILMPEHPHQISYLQGLVLGVSAGANRRPFSTRTVWVRIEEKTSARAALAATGTLAKDSP
RLDPKVRRLLGDDSPLSIVSDLLAPS
>Mature_266_residues
MRTAFSQNLRFLCAETPSIAQTCRDIGLNRQQFNRYLSGAGLPSAHNLRRIARHFDVPEADLFTNPDQFAAARRPKRSPQ
LPAPLFHLGTGFADQARILRRFLGSYHGYFTTPTWPGQVLRTLIHLRDVDGYVTSHTFERARSLDGSIHQRSSYRGLVAE
RGGRLCLLERPRNAVGALSETILMPEHPHQISYLQGLVLGVSAGANRRPFSTRTVWVRIEEKTSARAALAATGTLAKDSP
RLDPKVRRLLGDDSPLSIVSDLLAPS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29602; Mature: 29602

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: PS50943 HTH_CROC1 ; PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTAFSQNLRFLCAETPSIAQTCRDIGLNRQQFNRYLSGAGLPSAHNLRRIARHFDVPEA
CCCCHHHCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
DLFTNPDQFAAARRPKRSPQLPAPLFHLGTGFADQARILRRFLGSYHGYFTTPTWPGQVL
HHCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCEECCCCCHHHHH
RTLIHLRDVDGYVTSHTFERARSLDGSIHQRSSYRGLVAERGGRLCLLERPRNAVGALSE
HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCEEEEECCCHHHHHHHH
TILMPEHPHQISYLQGLVLGVSAGANRRPFSTRTVWVRIEEKTSARAALAATGTLAKDSP
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCC
RLDPKVRRLLGDDSPLSIVSDLLAPS
CCCHHHHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MRTAFSQNLRFLCAETPSIAQTCRDIGLNRQQFNRYLSGAGLPSAHNLRRIARHFDVPEA
CCCCHHHCCEEEECCCHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCH
DLFTNPDQFAAARRPKRSPQLPAPLFHLGTGFADQARILRRFLGSYHGYFTTPTWPGQVL
HHCCCCHHHHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHCCEECCCCCHHHHH
RTLIHLRDVDGYVTSHTFERARSLDGSIHQRSSYRGLVAERGGRLCLLERPRNAVGALSE
HHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCHHHHCCCCEEEEECCCHHHHHHHH
TILMPEHPHQISYLQGLVLGVSAGANRRPFSTRTVWVRIEEKTSARAALAATGTLAKDSP
HHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCCCCCC
RLDPKVRRLLGDDSPLSIVSDLLAPS
CCCHHHHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA