| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is zwf [H]
Identifier: 99080218
GI number: 99080218
Start: 386534
End: 387985
Strand: Reverse
Name: zwf [H]
Synonym: TM1040_0377
Alternate gene names: 99080218
Gene position: 387985-386534 (Counterclockwise)
Preceding gene: 99080219
Following gene: 99080217
Centisome position: 12.12
GC content: 60.88
Gene sequence:
>1452_bases ATGGTATCCCGCGTCATCCCCGTCGACAGTTTCGACTTCGTCTTGTTCGGCGCCACCGGCGACCTTGCCCGACGCAAGAT CCTGCCAAGCCTGTTCCACCGCTTTCAGATCGGCCAGTTCGACGACAACAGCCGCATCATCGGGGCCTCGCGTTCCAAGA TGGATCAGGGTGAGTTTCAGACCCTCGTGGGCGATGCGCTCAAGGAATTCGGCGACATCCCCGCCGATGCAGAACCAGAT GTGGAGCGGTTTCTGTCGCTTCTGGATTACGCATCGGTAGATGCCAAGGGCGATGGCGGCTGGTCGGATCTGGGCAGCAA GCTGCGCGATGGCGTAGTGCGGGCGTTTTATCTCTCGGTCGCGCCTTCGCTCTTTGGCGACATCGCCGGGCGGCTCAAAT CCACGGGTATCGCGGACGACCAGAGCCGCATCGTGGTGGAAAAACCCTTCGGTCACGATCTGGCCTCGGCACAGGCGTTG AATGCGGCCCTGCGCGAGCACTTTGAGGAAAGCCAGATCTACCGGATCGACCACTACCTTGGCAAAGAGACGGTGCAGAA CCTGATGGCGCTGCGCTTTGCCAATTCGCTTTTTGAGCCGCAGTGGAATTCGCATCACATCGACCATGTGCAGATCACCG TCTCCGAGAGCATCTCGGTTGCGGGTCGGGGCGAGTATTACGACAAATCCGGCGCCATGCGGGATATGGTGCAGAACCAC CTGATGCAGCTTCTGTGCCTCACCGCGATGGAGCCTCCCTCCACCTTTGAACCCAATGCGGTGCGCAATGAAAAACTCAA GGTAATCGAGAGCCTCGTACCCGTGGCCGCAGATGACATCGTGCGCGGCCAGTATCGCGCCAAATCTGGGAACGACAGCT ACCTTGACCACGCAGGTGACCCGCAGTCGCGCACCGAGAGCTTTGTCGCGATGAAGGTCGAGGTGGCAAACTGGCGCTGG GCAGGGACACCGTTCTACCTGCGCACCGGCAAATGCTTGCGCGAGCGCGTGTCGGAGATTGCGGTGTATTTTCGCAAACC GCCGCACAATATTTTTGGCGAGGACAATGCGATTGATGGCAATATGCTGGTCATTCGCCTGCAACCCGACGAAGGCATCA CGCTCAAGACCACGATCAAGGATCCCGGCCCCGGAGGCATGCGCCTGACGTCTGCGGACCTCGATATGACCTTTGCTGAC AGCCTGCCCGAAGCGGGTCGCCCGCAGGACGCCTATGAGCGCCTCATCATGGATGTGATCCGGGGCAATCAGACCCTGTT CATGCGCGGCGATGAGGTCGAAGCTGCCTGGACCTGGGCCGACCCGATCATCAACGCGTGGGACACATCCACCCGCGCGC CGCAACCCTATGACCAAGGTGGCTCCGGCCCCGAGGATGCGCTTTTGCTGCTGCACCGGGATGGCCGCCGCTGGCGCTCC ATCGGTGCCTGA
Upstream 100 bases:
>100_bases GCCGATGGTCGAAGGGGCAGATGCATCCCAAAAAGACGCCTCCACCCGCGGCCTGCTCGCCAAACTCTCCACCTGACCGT CAACCAAGAGGAAGACACCC
Downstream 100 bases:
>100_bases CCCTGTACTGAGATCTGAAAGGAGGCACGCCAATGTCGCTCAATGCAACACTCGCCGCCGTCACTGACCGTATCATCGAA CGCAGCCGCCCCACGCGCGA
Product: glucose-6-phosphate 1-dehydrogenase
Products: NA
Alternate protein names: G6PD [H]
Number of amino acids: Translated: 483; Mature: 483
Protein sequence:
>483_residues MVSRVIPVDSFDFVLFGATGDLARRKILPSLFHRFQIGQFDDNSRIIGASRSKMDQGEFQTLVGDALKEFGDIPADAEPD VERFLSLLDYASVDAKGDGGWSDLGSKLRDGVVRAFYLSVAPSLFGDIAGRLKSTGIADDQSRIVVEKPFGHDLASAQAL NAALREHFEESQIYRIDHYLGKETVQNLMALRFANSLFEPQWNSHHIDHVQITVSESISVAGRGEYYDKSGAMRDMVQNH LMQLLCLTAMEPPSTFEPNAVRNEKLKVIESLVPVAADDIVRGQYRAKSGNDSYLDHAGDPQSRTESFVAMKVEVANWRW AGTPFYLRTGKCLRERVSEIAVYFRKPPHNIFGEDNAIDGNMLVIRLQPDEGITLKTTIKDPGPGGMRLTSADLDMTFAD SLPEAGRPQDAYERLIMDVIRGNQTLFMRGDEVEAAWTWADPIINAWDTSTRAPQPYDQGGSGPEDALLLLHRDGRRWRS IGA
Sequences:
>Translated_483_residues MVSRVIPVDSFDFVLFGATGDLARRKILPSLFHRFQIGQFDDNSRIIGASRSKMDQGEFQTLVGDALKEFGDIPADAEPD VERFLSLLDYASVDAKGDGGWSDLGSKLRDGVVRAFYLSVAPSLFGDIAGRLKSTGIADDQSRIVVEKPFGHDLASAQAL NAALREHFEESQIYRIDHYLGKETVQNLMALRFANSLFEPQWNSHHIDHVQITVSESISVAGRGEYYDKSGAMRDMVQNH LMQLLCLTAMEPPSTFEPNAVRNEKLKVIESLVPVAADDIVRGQYRAKSGNDSYLDHAGDPQSRTESFVAMKVEVANWRW AGTPFYLRTGKCLRERVSEIAVYFRKPPHNIFGEDNAIDGNMLVIRLQPDEGITLKTTIKDPGPGGMRLTSADLDMTFAD SLPEAGRPQDAYERLIMDVIRGNQTLFMRGDEVEAAWTWADPIINAWDTSTRAPQPYDQGGSGPEDALLLLHRDGRRWRS IGA >Mature_483_residues MVSRVIPVDSFDFVLFGATGDLARRKILPSLFHRFQIGQFDDNSRIIGASRSKMDQGEFQTLVGDALKEFGDIPADAEPD VERFLSLLDYASVDAKGDGGWSDLGSKLRDGVVRAFYLSVAPSLFGDIAGRLKSTGIADDQSRIVVEKPFGHDLASAQAL NAALREHFEESQIYRIDHYLGKETVQNLMALRFANSLFEPQWNSHHIDHVQITVSESISVAGRGEYYDKSGAMRDMVQNH LMQLLCLTAMEPPSTFEPNAVRNEKLKVIESLVPVAADDIVRGQYRAKSGNDSYLDHAGDPQSRTESFVAMKVEVANWRW AGTPFYLRTGKCLRERVSEIAVYFRKPPHNIFGEDNAIDGNMLVIRLQPDEGITLKTTIKDPGPGGMRLTSADLDMTFAD SLPEAGRPQDAYERLIMDVIRGNQTLFMRGDEVEAAWTWADPIINAWDTSTRAPQPYDQGGSGPEDALLLLHRDGRRWRS IGA
Specific function: Pentose phosphate pathway; first step. [C]
COG id: COG0364
COG function: function code G; Glucose-6-phosphate 1-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucose-6-phosphate dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI108773793, Length=492, Percent_Identity=36.7886178861789, Blast_Score=305, Evalue=5e-83, Organism=Homo sapiens, GI109389365, Length=492, Percent_Identity=36.7886178861789, Blast_Score=305, Evalue=6e-83, Organism=Homo sapiens, GI52145310, Length=491, Percent_Identity=30.142566191446, Blast_Score=193, Evalue=3e-49, Organism=Escherichia coli, GI1788158, Length=481, Percent_Identity=43.8669438669439, Blast_Score=406, Evalue=1e-114, Organism=Caenorhabditis elegans, GI17538218, Length=482, Percent_Identity=35.0622406639004, Blast_Score=303, Evalue=9e-83, Organism=Saccharomyces cerevisiae, GI6324088, Length=465, Percent_Identity=37.2043010752688, Blast_Score=303, Evalue=5e-83, Organism=Drosophila melanogaster, GI24643350, Length=472, Percent_Identity=36.6525423728814, Blast_Score=301, Evalue=5e-82, Organism=Drosophila melanogaster, GI24643352, Length=472, Percent_Identity=36.6525423728814, Blast_Score=301, Evalue=6e-82, Organism=Drosophila melanogaster, GI221513548, Length=492, Percent_Identity=28.4552845528455, Blast_Score=212, Evalue=5e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001282 - InterPro: IPR019796 - InterPro: IPR022675 - InterPro: IPR022674 - InterPro: IPR016040 [H]
Pfam domain/function: PF02781 G6PD_C; PF00479 G6PD_N [H]
EC number: =1.1.1.49 [H]
Molecular weight: Translated: 53783; Mature: 53783
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: PS00069 G6P_DEHYDROGENASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSRVIPVDSFDFVLFGATGDLARRKILPSLFHRFQIGQFDDNSRIIGASRSKMDQGEFQ CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH TLVGDALKEFGDIPADAEPDVERFLSLLDYASVDAKGDGGWSDLGSKLRDGVVRAFYLSV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH APSLFGDIAGRLKSTGIADDQSRIVVEKPFGHDLASAQALNAALREHFEESQIYRIDHYL HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHH GKETVQNLMALRFANSLFEPQWNSHHIDHVQITVSESISVAGRGEYYDKSGAMRDMVQNH CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCHHHHHHHHH LMQLLCLTAMEPPSTFEPNAVRNEKLKVIESLVPVAADDIVRGQYRAKSGNDSYLDHAGD HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PQSRTESFVAMKVEVANWRWAGTPFYLRTGKCLRERVSEIAVYFRKPPHNIFGEDNAIDG CHHHHCCEEEEEEEECCEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NMLVIRLQPDEGITLKTTIKDPGPGGMRLTSADLDMTFADSLPEAGRPQDAYERLIMDVI CEEEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHH RGNQTLFMRGDEVEAAWTWADPIINAWDTSTRAPQPYDQGGSGPEDALLLLHRDGRRWRS CCCCEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHC IGA CCC >Mature Secondary Structure MVSRVIPVDSFDFVLFGATGDLARRKILPSLFHRFQIGQFDDNSRIIGASRSKMDQGEFQ CCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHHH TLVGDALKEFGDIPADAEPDVERFLSLLDYASVDAKGDGGWSDLGSKLRDGVVRAFYLSV HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH APSLFGDIAGRLKSTGIADDQSRIVVEKPFGHDLASAQALNAALREHFEESQIYRIDHYL HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHH GKETVQNLMALRFANSLFEPQWNSHHIDHVQITVSESISVAGRGEYYDKSGAMRDMVQNH CHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEECCCCCCCCCCCHHHHHHHHH LMQLLCLTAMEPPSTFEPNAVRNEKLKVIESLVPVAADDIVRGQYRAKSGNDSYLDHAGD HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC PQSRTESFVAMKVEVANWRWAGTPFYLRTGKCLRERVSEIAVYFRKPPHNIFGEDNAIDG CHHHHCCEEEEEEEECCEEECCCCEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC NMLVIRLQPDEGITLKTTIKDPGPGGMRLTSADLDMTFADSLPEAGRPQDAYERLIMDVI CEEEEEECCCCCEEEEEEECCCCCCCCEEEECCCCCHHHHCCCCCCCCHHHHHHHHHHHH RGNQTLFMRGDEVEAAWTWADPIINAWDTSTRAPQPYDQGGSGPEDALLLLHRDGRRWRS CCCCEEEEECCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHC IGA CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10400573; 11481430 [H]