| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080215
Identifier: 99080215
GI number: 99080215
Start: 383481
End: 383897
Strand: Reverse
Name: 99080215
Synonym: TM1040_0374
Alternate gene names: NA
Gene position: 383897-383481 (Counterclockwise)
Preceding gene: 99080216
Following gene: 99080214
Centisome position: 11.99
GC content: 58.51
Gene sequence:
>417_bases ATGACGCAAGATTACACTGGAAGCTGTCTCTGTGGCGCCATTGCGTTTGAACTCACGGGTGATATCGCCGCCTTCTTCCT TTGTTATTGTTCGCGCTGCCGCAAAGGAACGGGCAGCGCCCATGCTGCAAATCTCTTCGCTCCCGACGCGTTGATCTACT GGACCCGTGGCGCGGAACATCTGCGCCAGTACCAGCACAACAACAGCCGCCACTGCCGCAGCTTCTGCCCCACCTGTGCA AGTCCCATGCCTCAGGTTCAGCCCGATTGCATTGTGATCCCCGCAGGCTGTCTCGATCAGGTGCCCGAAGTCCCGATCAG CGCGGGCATCTGCTGGTCAGACCGGGCCAAATGGGTCGATGGCATCGCTGCGGCTGATAAAACTGATGGATTGCCCCAAA ATCATTCCCGTCGCTGA
Upstream 100 bases:
>100_bases GCTAGCCAGCGGCGCCCGGTGGCATTTCTACAGACCCAGGCTTGACCCGCCCCCAAAGCCACGACAGCCTGCGCGCACCC CCACAACCAACGGAGCGCCC
Downstream 100 bases:
>100_bases AATACCGCTTGCCCTCAATCATGGTTGAGATCCGACAACATCCCAGAGACGTTTTACCGGAGACAAAACCATGCGTATTT TCCTCTTGGGGGCCACGGGC
Product: glutathione-dependent formaldehyde-activating, GFA
Products: NA
Alternate protein names: Glutathione-Dependent Formaldehyde-Activating
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTQDYTGSCLCGAIAFELTGDIAAFFLCYCSRCRKGTGSAHAANLFAPDALIYWTRGAEHLRQYQHNNSRHCRSFCPTCA SPMPQVQPDCIVIPAGCLDQVPEVPISAGICWSDRAKWVDGIAAADKTDGLPQNHSRR
Sequences:
>Translated_138_residues MTQDYTGSCLCGAIAFELTGDIAAFFLCYCSRCRKGTGSAHAANLFAPDALIYWTRGAEHLRQYQHNNSRHCRSFCPTCA SPMPQVQPDCIVIPAGCLDQVPEVPISAGICWSDRAKWVDGIAAADKTDGLPQNHSRR >Mature_137_residues TQDYTGSCLCGAIAFELTGDIAAFFLCYCSRCRKGTGSAHAANLFAPDALIYWTRGAEHLRQYQHNNSRHCRSFCPTCAS PMPQVQPDCIVIPAGCLDQVPEVPISAGICWSDRAKWVDGIAAADKTDGLPQNHSRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15065; Mature: 14934
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 9.4 %Cys+Met (Translated Protein) 8.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQDYTGSCLCGAIAFELTGDIAAFFLCYCSRCRKGTGSAHAANLFAPDALIYWTRGAEH CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHH LRQYQHNNSRHCRSFCPTCASPMPQVQPDCIVIPAGCLDQVPEVPISAGICWSDRAKWVD HHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHH GIAAADKTDGLPQNHSRR HHHHCCCCCCCCCCCCCC >Mature Secondary Structure TQDYTGSCLCGAIAFELTGDIAAFFLCYCSRCRKGTGSAHAANLFAPDALIYWTRGAEH CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHH LRQYQHNNSRHCRSFCPTCASPMPQVQPDCIVIPAGCLDQVPEVPISAGICWSDRAKWVD HHHHHCCCCHHHHHHCCCCCCCCCCCCCCEEEECCCHHHCCCCCCCCCCCCCCCCHHHHH GIAAADKTDGLPQNHSRR HHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA