Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080192

Identifier: 99080192

GI number: 99080192

Start: 357498

End: 357893

Strand: Direct

Name: 99080192

Synonym: TM1040_0351

Alternate gene names: NA

Gene position: 357498-357893 (Clockwise)

Preceding gene: 99080191

Following gene: 99080193

Centisome position: 11.17

GC content: 62.37

Gene sequence:

>396_bases
ATGCCGATAGAACGACGCACGAAAAAGAGCCACCGCGAGCCGACGATTGCGCTCATCAACGTGGTGTTCCTGATGCTGGT
CTTCTTCATGGTGGCGGGATCGCTTGCGCCCTCACTGGACCCAACGGTGCGCCTGGTGCAAGCCTCAGAGCTGGAGGCCG
CACCCCCGCCGGACGCTCTGGTGATCCGGGCCGATGGTAGCCTGCATTTTCGCGGTGCCGAGCTCACCTCTCCTGAGGCC
TATGTGCGCATCATCTGGGAAGAGGAAGACGCCTTTACCGCGCGTCTGGTGCCGGACCGCGCCTTGCCGGCCAGCACGCT
TTTGACCATCGCAAAGGAACTGCGCCGGCTTGGCGCAGAACGGGTGACACTCTTGTCAGAACAGAGCCTCACATGA

Upstream 100 bases:

>100_bases
GCTGAGCCTGTCCGGCGCGGTGACCTCACAGCGTTTGGTGGACGTGCTCGCGGTTTTGCGTCGCCAGCCGGATCTCGCCG
TGACGGTGGTGGAGTAACCC

Downstream 100 bases:

>100_bases
TTGCGCGTTCGCCTTTGATTGCCTGTGTATCGCTCTTTTGTGCGCTGGCTGCCCATGCGGCTCTCCTGGTGGATCTCGAA
GAGACCGCTGTGGAAATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MPIERRTKKSHREPTIALINVVFLMLVFFMVAGSLAPSLDPTVRLVQASELEAAPPPDALVIRADGSLHFRGAELTSPEA
YVRIIWEEEDAFTARLVPDRALPASTLLTIAKELRRLGAERVTLLSEQSLT

Sequences:

>Translated_131_residues
MPIERRTKKSHREPTIALINVVFLMLVFFMVAGSLAPSLDPTVRLVQASELEAAPPPDALVIRADGSLHFRGAELTSPEA
YVRIIWEEEDAFTARLVPDRALPASTLLTIAKELRRLGAERVTLLSEQSLT
>Mature_130_residues
PIERRTKKSHREPTIALINVVFLMLVFFMVAGSLAPSLDPTVRLVQASELEAAPPPDALVIRADGSLHFRGAELTSPEAY
VRIIWEEEDAFTARLVPDRALPASTLLTIAKELRRLGAERVTLLSEQSLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14489; Mature: 14358

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIERRTKKSHREPTIALINVVFLMLVFFMVAGSLAPSLDPTVRLVQASELEAAPPPDAL
CCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEE
VIRADGSLHFRGAELTSPEAYVRIIWEEEDAFTARLVPDRALPASTLLTIAKELRRLGAE
EEEECCCEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCHH
RVTLLSEQSLT
HHHHHHCCCCC
>Mature Secondary Structure 
PIERRTKKSHREPTIALINVVFLMLVFFMVAGSLAPSLDPTVRLVQASELEAAPPPDAL
CCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCCEE
VIRADGSLHFRGAELTSPEAYVRIIWEEEDAFTARLVPDRALPASTLLTIAKELRRLGAE
EEEECCCEEEECCCCCCCCEEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHCHH
RVTLLSEQSLT
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA