Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080159

Identifier: 99080159

GI number: 99080159

Start: 324245

End: 324664

Strand: Direct

Name: 99080159

Synonym: TM1040_0318

Alternate gene names: NA

Gene position: 324245-324664 (Clockwise)

Preceding gene: 99080158

Following gene: 99080160

Centisome position: 10.13

GC content: 57.14

Gene sequence:

>420_bases
GTGGTCGTCGGCTGCACCTGCGGGTCTGGTTTTCATGATCTTCGGTTTCGGTTTGGGCAAGCTCGGCGAACGGCGGCTTC
TCCTAGTCCTCGTGCATCGTGTGGCCGCTGCTTTACAGATCAAAACCACGACTTTGCAAAGGTCACTAACTGCGCTTTCC
AGTCATTCGACCAGGGAGCAGCATTTGGTAAAGTGGGCCTCTGCACCCGCCGTTGTTTCGATCTGCATGTGCGGCCGCTG
TCGATCTTGGGTCAGAAATACTTGACGTTTGGGTCAAAATCGAGAGGCGCGGCCGTGCCGTTCTCTCAGGCTTTGGTCGC
TGATTGGGGCAACGGTGTTCGACGTTCCACGCCTCGCCTCCAAATAGCTGACGCTTGGCGCCGAGCGCGAATGTGGCTTT
GTCCGAGCATCTCGTCCTAA

Upstream 100 bases:

>100_bases
CGATTCTGGCAACAATTGTCGCTAAGGAAATCGCGCTCGATTGCTCTAAGCTGCACATGTCGCGTAGGGCCGGATAGCCC
CACATCCCCTGCGTTCGAAG

Downstream 100 bases:

>100_bases
CCGCAATCACAGATACGAGTTGTTCTGGGCGTGATCCGGTCTGGCCGGTCGGGTTGATGCGCGCGGGCGAGAAGTCTGGC
TAGGGTGGCCCAGACTGTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 139; Mature: 139

Protein sequence:

>139_residues
MVVGCTCGSGFHDLRFRFGQARRTAASPSPRASCGRCFTDQNHDFAKVTNCAFQSFDQGAAFGKVGLCTRRCFDLHVRPL
SILGQKYLTFGSKSRGAAVPFSQALVADWGNGVRRSTPRLQIADAWRRARMWLCPSISS

Sequences:

>Translated_139_residues
MVVGCTCGSGFHDLRFRFGQARRTAASPSPRASCGRCFTDQNHDFAKVTNCAFQSFDQGAAFGKVGLCTRRCFDLHVRPL
SILGQKYLTFGSKSRGAAVPFSQALVADWGNGVRRSTPRLQIADAWRRARMWLCPSISS
>Mature_139_residues
MVVGCTCGSGFHDLRFRFGQARRTAASPSPRASCGRCFTDQNHDFAKVTNCAFQSFDQGAAFGKVGLCTRRCFDLHVRPL
SILGQKYLTFGSKSRGAAVPFSQALVADWGNGVRRSTPRLQIADAWRRARMWLCPSISS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15296; Mature: 15296

Theoretical pI: Translated: 11.05; Mature: 11.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVGCTCGSGFHDLRFRFGQARRTAASPSPRASCGRCFTDQNHDFAKVTNCAFQSFDQGA
CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
AFGKVGLCTRRCFDLHVRPLSILGQKYLTFGSKSRGAAVPFSQALVADWGNGVRRSTPRL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE
QIADAWRRARMWLCPSISS
EHHHHHHHHHEEECCCCCC
>Mature Secondary Structure
MVVGCTCGSGFHDLRFRFGQARRTAASPSPRASCGRCFTDQNHDFAKVTNCAFQSFDQGA
CEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
AFGKVGLCTRRCFDLHVRPLSILGQKYLTFGSKSRGAAVPFSQALVADWGNGVRRSTPRL
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCE
QIADAWRRARMWLCPSISS
EHHHHHHHHHEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA