Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080158

Identifier: 99080158

GI number: 99080158

Start: 323531

End: 324073

Strand: Direct

Name: 99080158

Synonym: TM1040_0317

Alternate gene names: NA

Gene position: 323531-324073 (Clockwise)

Preceding gene: 99080157

Following gene: 99080159

Centisome position: 10.11

GC content: 50.28

Gene sequence:

>543_bases
ATGCTCCGCCATCTCACAACAAAATTCGTACTCGCCCTTCTCCTCGCAGCTTGTAGCACAACACAAGGCAGCGTCAGCCG
AAAGTCAATTCAGATCGACGCAATGACGGTAACCTGGAACGACATGCTGCAATTAAGTTCATTGCATGAAGCCTTTCCGA
CGGAAAAGGGCACAAGCATTTACATGTTCACGAGGTTGTTCAAAGACCCAACCTACACCCCGCGAAAGGCGCAGCTGTCA
AATGGCTGGACTGTTACAGGAAACATAGGTGCTTGTGACCTTATTTTGAGGAAACAGCCCGCCAATGCACAACAGTTGTA
TGACGAATGCCGTACAAAACTTGCGGCGCTAGCCGCGCCTAAACCGCAGCCTGAGCTTGGGCTTAAGGAGTTTATCAATT
TGGCAGAGCGCGCTGTTCAACAAGAGGGGAGCTGCCAGTGGCTTGGATATGACCGCGGCCTTGATTTAACTGTCCGGGCG
CATGGAAGCCTAGCCAGTTTTTCTGACGAAAGACTTTTCTTTGCTAAGCTGAAATGCAGCTAA

Upstream 100 bases:

>100_bases
AGCTTGATTGGCGCGCAAAGCGTCGCCAGAGTGACAAAGGCCGTGTTCTACTTGGAGAATGTCGGCTATGCCAATGCAAC
TCTTTCAAAGTGCCGAATAA

Downstream 100 bases:

>100_bases
AACACTAGCTGCTGAAAGATGGTAGTCTCAACGCGGTTCCATTGCTTGCTGTGAGGTGGCTGCCATCATCCCGATTCTGG
CAACAATTGTCGCTAAGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MLRHLTTKFVLALLLAACSTTQGSVSRKSIQIDAMTVTWNDMLQLSSLHEAFPTEKGTSIYMFTRLFKDPTYTPRKAQLS
NGWTVTGNIGACDLILRKQPANAQQLYDECRTKLAALAAPKPQPELGLKEFINLAERAVQQEGSCQWLGYDRGLDLTVRA
HGSLASFSDERLFFAKLKCS

Sequences:

>Translated_180_residues
MLRHLTTKFVLALLLAACSTTQGSVSRKSIQIDAMTVTWNDMLQLSSLHEAFPTEKGTSIYMFTRLFKDPTYTPRKAQLS
NGWTVTGNIGACDLILRKQPANAQQLYDECRTKLAALAAPKPQPELGLKEFINLAERAVQQEGSCQWLGYDRGLDLTVRA
HGSLASFSDERLFFAKLKCS
>Mature_180_residues
MLRHLTTKFVLALLLAACSTTQGSVSRKSIQIDAMTVTWNDMLQLSSLHEAFPTEKGTSIYMFTRLFKDPTYTPRKAQLS
NGWTVTGNIGACDLILRKQPANAQQLYDECRTKLAALAAPKPQPELGLKEFINLAERAVQQEGSCQWLGYDRGLDLTVRA
HGSLASFSDERLFFAKLKCS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20045; Mature: 20045

Theoretical pI: Translated: 9.01; Mature: 9.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRHLTTKFVLALLLAACSTTQGSVSRKSIQIDAMTVTWNDMLQLSSLHEAFPTEKGTSI
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCEE
YMFTRLFKDPTYTPRKAQLSNGWTVTGNIGACDLILRKQPANAQQLYDECRTKLAALAAP
EEEEHHHCCCCCCCCCEECCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC
KPQPELGLKEFINLAERAVQQEGSCQWLGYDRGLDLTVRAHGSLASFSDERLFFAKLKCS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECC
>Mature Secondary Structure
MLRHLTTKFVLALLLAACSTTQGSVSRKSIQIDAMTVTWNDMLQLSSLHEAFPTEKGTSI
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEHHHHHHHHHHHHHCCCCCCCEE
YMFTRLFKDPTYTPRKAQLSNGWTVTGNIGACDLILRKQPANAQQLYDECRTKLAALAAP
EEEEHHHCCCCCCCCCEECCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC
KPQPELGLKEFINLAERAVQQEGSCQWLGYDRGLDLTVRAHGSLASFSDERLFFAKLKCS
CCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA