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The map label for this gene is yidD [C]

Identifier: 99080152

GI number: 99080152

Start: 317527

End: 317787

Strand: Reverse

Name: yidD [C]

Synonym: TM1040_0311

Alternate gene names: 99080152

Gene position: 317787-317527 (Counterclockwise)

Preceding gene: 99080153

Following gene: 99080150

Centisome position: 9.93

GC content: 66.28

Gene sequence:

>261_bases
ATGCGCCTTCTCGCCCGCCTCATTGCCCTGCCCGTTCGTGGCTATCGGCTGCTGTTCAGCCCCTGGGTCGGCTTTAACTG
CCGGTACCAGCCGACTTGCTCGGCCTATGCTCTCGACGCGCTGGAGCGTCACGGCCCCTTCAAGGGCACCTATCTGATGC
TGCGCCGCATTGGCCGCTGTCACCCTTTTGGCGGGTCGGGCTATGATCCTGTTCCGGGCGCGGACCCGAAGCACGACCGC
TGCTGCGGACGCACGCCCTAG

Upstream 100 bases:

>100_bases
TAAAAAGCCCCCTCCCCCGTTGGGCCCGGCGCCGCTGCGCGGCGCAAATCCGCGCCTCATTGACGTTGCGCTGACATGCG
CCAGTGCCTATGTCACGTCC

Downstream 100 bases:

>100_bases
CGCTGCTCGAAGAAGATCGTGACCTCGCCCAGGGTCACGCCAAAGCGCTCCATATAGGCGATGTTCAAAAGCCGCCCGTC
CTCCAGAAGCCACATCCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MRLLARLIALPVRGYRLLFSPWVGFNCRYQPTCSAYALDALERHGPFKGTYLMLRRIGRCHPFGGSGYDPVPGADPKHDR
CCGRTP

Sequences:

>Translated_86_residues
MRLLARLIALPVRGYRLLFSPWVGFNCRYQPTCSAYALDALERHGPFKGTYLMLRRIGRCHPFGGSGYDPVPGADPKHDR
CCGRTP
>Mature_86_residues
MRLLARLIALPVRGYRLLFSPWVGFNCRYQPTCSAYALDALERHGPFKGTYLMLRRIGRCHPFGGSGYDPVPGADPKHDR
CCGRTP

Specific function: Unknown

COG id: COG0759

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0161 family

Homologues:

Organism=Escherichia coli, GI87082322, Length=66, Percent_Identity=50, Blast_Score=69, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y311_SILST (Q1GJX2)

Other databases:

- EMBL:   CP000377
- RefSeq:   YP_612306.1
- STRING:   Q1GJX2
- GeneID:   4077134
- GenomeReviews:   CP000377_GR
- KEGG:   sit:TM1040_0311
- eggNOG:   COG0759
- HOGENOM:   HBG634291
- OMA:   RYCISPL
- BioCyc:   SSP292414:TM1040_0311-MONOMER
- HAMAP:   MF_00386
- InterPro:   IPR002696
- ProDom:   PD004225
- TIGRFAMs:   TIGR00278

Pfam domain/function: PF01809 DUF37

EC number: NA

Molecular weight: Translated: 9695; Mature: 9695

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
5.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLARLIALPVRGYRLLFSPWVGFNCRYQPTCSAYALDALERHGPFKGTYLMLRRIGRC
CHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC
HPFGGSGYDPVPGADPKHDRCCGRTP
CCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRLLARLIALPVRGYRLLFSPWVGFNCRYQPTCSAYALDALERHGPFKGTYLMLRRIGRC
CHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCC
HPFGGSGYDPVPGADPKHDRCCGRTP
CCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA