Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is ycbX [C]

Identifier: 99080147

GI number: 99080147

Start: 311365

End: 312102

Strand: Reverse

Name: ycbX [C]

Synonym: TM1040_0306

Alternate gene names: 99080147

Gene position: 312102-311365 (Counterclockwise)

Preceding gene: 99080148

Following gene: 99080146

Centisome position: 9.75

GC content: 64.77

Gene sequence:

>738_bases
ATGACAGCAACTGTCAGACAAATGTGGCGGCACCCGATCAAGGGGATCGGGGCCGAACCACTGACAGAGGTCCGCTTGGA
AACAGGCGGGCCTATGCCGTTGGATCGGGCCTGGGCAGTGTTGACCGGCACCTCCGAGGACACCGGCGCATGGCAGCCTT
GCCGCAATTTTGCGCGCGGCTGCTTTGGTCCCGAACTGATGGCGATCACCGCCGAGACGCAAGGCAACCAGATCACCCTG
CGCCACCCCAAACAGGGCGAGATCACCCTTGATCCGGCCACCGATGGCGCACGGCTTCTGGAGTGGCTCCTGCCGCTCTA
CCCCGCCGAGCGCCCTCAGCCTCATACGCTCATCAAGGCCCCCGCGGGCGGCATGGCGGATGCGGATTTCTCTGCCGTAG
CGATCCTGTCGCTCACCTCCCTCAAGGCGCTTGGTGATGCGCTGGGACAGGAGCTCGACCCGCGCCGGTTCCGGGGCAAT
CTCTGGATCGACGGCACCGCCCCCTTTGAAGAATTTGACTGGGTCGGGCGCGAGCTCAAGATAGGAACCGCGCGCCTTGA
GGTGGTGGACCGTATCACCCGTTGTCGCGCCACCGAGACCAACCCCGAGACCGGCGCGCGCGATGCCAACACGCTGAAAG
CGCTGCGCGAGCATTGGGGCCACACCGATTTTGGCATCCGCGCCAGAGTCCTGAGCGATGGCGACATCGCGCTTTCCGAC
AGCCTAGAGGTTCTGTGA

Upstream 100 bases:

>100_bases
AGCAGTATCTGATCATGCGCTCGCACGGCTATACCCCTGATGTCTTTGGCAATATCAAGTCAGGCTTCAAGAAGGACAAA
GCCGAGAAAGCCGAGAAGAA

Downstream 100 bases:

>100_bases
TGCAGCTTCCCTTTCCCCTCGCCGAAGAGCCCGATGCAGCGGCCATGGAAACCGGGCGCAAGCTCTTTGCCGGCCAGTCC
GAGTTCCTCAAGGGCGTGGT

Product: MOSC domain-containing protein

Products: NA

Alternate protein names: MOSC Domain Containing Protein; Mosc Domain Protein; MOSC Domain Protein; Mosc Domain Containing Protein; Transcriptional Regulator; Mosc Domain; Xylene Monooxygenase Electron Transfer Component

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTATVRQMWRHPIKGIGAEPLTEVRLETGGPMPLDRAWAVLTGTSEDTGAWQPCRNFARGCFGPELMAITAETQGNQITL
RHPKQGEITLDPATDGARLLEWLLPLYPAERPQPHTLIKAPAGGMADADFSAVAILSLTSLKALGDALGQELDPRRFRGN
LWIDGTAPFEEFDWVGRELKIGTARLEVVDRITRCRATETNPETGARDANTLKALREHWGHTDFGIRARVLSDGDIALSD
SLEVL

Sequences:

>Translated_245_residues
MTATVRQMWRHPIKGIGAEPLTEVRLETGGPMPLDRAWAVLTGTSEDTGAWQPCRNFARGCFGPELMAITAETQGNQITL
RHPKQGEITLDPATDGARLLEWLLPLYPAERPQPHTLIKAPAGGMADADFSAVAILSLTSLKALGDALGQELDPRRFRGN
LWIDGTAPFEEFDWVGRELKIGTARLEVVDRITRCRATETNPETGARDANTLKALREHWGHTDFGIRARVLSDGDIALSD
SLEVL
>Mature_244_residues
TATVRQMWRHPIKGIGAEPLTEVRLETGGPMPLDRAWAVLTGTSEDTGAWQPCRNFARGCFGPELMAITAETQGNQITLR
HPKQGEITLDPATDGARLLEWLLPLYPAERPQPHTLIKAPAGGMADADFSAVAILSLTSLKALGDALGQELDPRRFRGNL
WIDGTAPFEEFDWVGRELKIGTARLEVVDRITRCRATETNPETGARDANTLKALREHWGHTDFGIRARVLSDGDIALSDS
LEVL

Specific function: Unknown

COG id: COG3217

COG function: function code R; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26886; Mature: 26755

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATVRQMWRHPIKGIGAEPLTEVRLETGGPMPLDRAWAVLTGTSEDTGAWQPCRNFARG
CCHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
CFGPELMAITAETQGNQITLRHPKQGEITLDPATDGARLLEWLLPLYPAERPQPHTLIKA
CCCCCEEEEEECCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEC
PAGGMADADFSAVAILSLTSLKALGDALGQELDPRRFRGNLWIDGTAPFEEFDWVGRELK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCHHHHHHCCCEEE
IGTARLEVVDRITRCRATETNPETGARDANTLKALREHWGHTDFGIRARVLSDGDIALSD
ECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEECC
SLEVL
CCCCC
>Mature Secondary Structure 
TATVRQMWRHPIKGIGAEPLTEVRLETGGPMPLDRAWAVLTGTSEDTGAWQPCRNFARG
CHHHHHHHHHHHHCCCCCCHHHEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHH
CFGPELMAITAETQGNQITLRHPKQGEITLDPATDGARLLEWLLPLYPAERPQPHTLIKA
CCCCCEEEEEECCCCCEEEEECCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCCCEEEEC
PAGGMADADFSAVAILSLTSLKALGDALGQELDPRRFRGNLWIDGTAPFEEFDWVGRELK
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCEEECCCCCHHHHHHCCCEEE
IGTARLEVVDRITRCRATETNPETGARDANTLKALREHWGHTDFGIRARVLSDGDIALSD
ECHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECCCCEEECC
SLEVL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA