Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99080140

Identifier: 99080140

GI number: 99080140

Start: 305689

End: 306186

Strand: Reverse

Name: 99080140

Synonym: TM1040_0299

Alternate gene names: NA

Gene position: 306186-305689 (Counterclockwise)

Preceding gene: 99080141

Following gene: 99080139

Centisome position: 9.57

GC content: 64.26

Gene sequence:

>498_bases
ATGACCTGTACCCTGTTTCTGACCCGCCACGCAAAATCCGCCTGGAACACCGACGCCCCCAGCGACCACGCGCGCCCGCT
GAACACGCGCGGCCGCCGCTCGGCCGCCGCTCTGGGCGCCTGGGTCCGCGAACAGAGCAGCCCGCCTCTGCAAGTGCTCT
CCTCCTCGGCGCAGCGCACCCGCGAGACCTATGATCTCATGGCACTCACCGCTCCGGCGACCTTCACCGAGCGCCTCTAT
CATGCCACGCCCGAGATCCTCTACGATGTGCTGCGCGAGGCCACCCAGCCCAATGTGCTGCTGCTGGGCCATAATCCGGG
TCTTTTGGCCTTTGCTCATGATATCGTCAAACATCCGCCGCCACACTCGCGGTTCGACGACTACCCCACAGGGGCAACTC
TGCTGGTCGAGTTCGACATCGCGCATTGGGCCGAGATGCAACCGCACAGCGGCCGGGTGATCGATTTTGTGGTCTCCCGC
GAACTCTTGGGAGAATAA

Upstream 100 bases:

>100_bases
TGGCATCGGGCTGCATCGCGCGCCGGGCCTGCCCGCTCAGTGACGGTGCCGGACGCCAGCCTGCGCAATCTGCCCACCAC
ATGAGATATTTTCATCGCCC

Downstream 100 bases:

>100_bases
CCGCGCCTTGCCTGCAGAGGCCCCGCGCGGTAGGCTCTAGCTCAGACACAGGAGATTTGATGTCCCGTTGATACCGGCGC
AACCGCGCCAGTGCTGCACC

Product: putative phosphohistidine phosphatase, SixA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MTCTLFLTRHAKSAWNTDAPSDHARPLNTRGRRSAAALGAWVREQSSPPLQVLSSSAQRTRETYDLMALTAPATFTERLY
HATPEILYDVLREATQPNVLLLGHNPGLLAFAHDIVKHPPPHSRFDDYPTGATLLVEFDIAHWAEMQPHSGRVIDFVVSR
ELLGE

Sequences:

>Translated_165_residues
MTCTLFLTRHAKSAWNTDAPSDHARPLNTRGRRSAAALGAWVREQSSPPLQVLSSSAQRTRETYDLMALTAPATFTERLY
HATPEILYDVLREATQPNVLLLGHNPGLLAFAHDIVKHPPPHSRFDDYPTGATLLVEFDIAHWAEMQPHSGRVIDFVVSR
ELLGE
>Mature_164_residues
TCTLFLTRHAKSAWNTDAPSDHARPLNTRGRRSAAALGAWVREQSSPPLQVLSSSAQRTRETYDLMALTAPATFTERLYH
ATPEILYDVLREATQPNVLLLGHNPGLLAFAHDIVKHPPPHSRFDDYPTGATLLVEFDIAHWAEMQPHSGRVIDFVVSRE
LLGE

Specific function: Unknown

COG id: COG2062

COG function: function code T; Phosphohistidine phosphatase SixA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sixA phosphatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013078 [H]

Pfam domain/function: PF00300 PGAM [H]

EC number: NA

Molecular weight: Translated: 18419; Mature: 18288

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCTLFLTRHAKSAWNTDAPSDHARPLNTRGRRSAAALGAWVREQSSPPLQVLSSSAQRT
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RETYDLMALTAPATFTERLYHATPEILYDVLREATQPNVLLLGHNPGLLAFAHDIVKHPP
HHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC
PHSRFDDYPTGATLLVEFDIAHWAEMQPHSGRVIDFVVSRELLGE
CCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCEEHHEEHHHHHCC
>Mature Secondary Structure 
TCTLFLTRHAKSAWNTDAPSDHARPLNTRGRRSAAALGAWVREQSSPPLQVLSSSAQRT
EEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH
RETYDLMALTAPATFTERLYHATPEILYDVLREATQPNVLLLGHNPGLLAFAHDIVKHPP
HHHHHHHEEECCHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHCCC
PHSRFDDYPTGATLLVEFDIAHWAEMQPHSGRVIDFVVSRELLGE
CCCCCCCCCCCCEEEEEECCHHHHHCCCCCCCEEHHEEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]