| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is yiaC [H]
Identifier: 99080139
GI number: 99080139
Start: 305059
End: 305484
Strand: Reverse
Name: yiaC [H]
Synonym: TM1040_0298
Alternate gene names: 99080139
Gene position: 305484-305059 (Counterclockwise)
Preceding gene: 99080140
Following gene: 99080130
Centisome position: 9.54
GC content: 58.92
Gene sequence:
>426_bases ATGATCAGACCCTATTCTCCGTCGGATAAATCGACGGTCCTCGACATCTGGCGCGCGGCAAGTGCCATCGCCCACCCGTT CCTCAGCCAAAGGCTTGTGGCCGAGGCCGAAGCCATGATCCGCGACCAGTTCCTTGACCTTGCCGAAACCTGGATGATCG CGCCGGGTGCCACACCCGTTGGCTTCATCGCACTCTTGGGCAATGAGGTCGGCGGGCTGTTTGTTCTTCCAGACCATCAG GGCAAGGGCTACGGGCGCGCCCTTCTGGATCACGTACAAGCGCGCCGCGAGGCGCTCACGCTCAGTGTCTTTGCGGCAAA CCACACGGCGCGTCGTTTCTACGAGGCCTACGGTTTCACACCTTTAGAAGAACGCCTCAACCCTTTCTTCAAACACAAAG AAATCGTGATGCGCCTACCAAGCTGA
Upstream 100 bases:
>100_bases ACCAGGCAATCGCGTGCCGCTTCGGCCGCTCCTGCTGGTGTGTGCAATCCCATCAACTCCTCCGCCGCCCTGTGCGGCGC AACACGGGACAGTCCTGACA
Downstream 100 bases:
>100_bases CGCAGGAACCGGAGCGCAAAAGCAACTGCGCTCTGCCTTCAGCTTTTTGAAAATATCCCGGGGGTCGGGCCCGCAGGGCT CGAAAGGGGGCAGCGCCCCC
Product: GCN5-related N-acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MIRPYSPSDKSTVLDIWRAASAIAHPFLSQRLVAEAEAMIRDQFLDLAETWMIAPGATPVGFIALLGNEVGGLFVLPDHQ GKGYGRALLDHVQARREALTLSVFAANHTARRFYEAYGFTPLEERLNPFFKHKEIVMRLPS
Sequences:
>Translated_141_residues MIRPYSPSDKSTVLDIWRAASAIAHPFLSQRLVAEAEAMIRDQFLDLAETWMIAPGATPVGFIALLGNEVGGLFVLPDHQ GKGYGRALLDHVQARREALTLSVFAANHTARRFYEAYGFTPLEERLNPFFKHKEIVMRLPS >Mature_141_residues MIRPYSPSDKSTVLDIWRAASAIAHPFLSQRLVAEAEAMIRDQFLDLAETWMIAPGATPVGFIALLGNEVGGLFVLPDHQ GKGYGRALLDHVQARREALTLSVFAANHTARRFYEAYGFTPLEERLNPFFKHKEIVMRLPS
Specific function: Unknown
COG id: COG0454
COG function: function code KR; Histone acetyltransferase HPA2 and related acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 N-acetyltransferase domain [H]
Homologues:
Organism=Escherichia coli, GI1789972, Length=120, Percent_Identity=30.8333333333333, Blast_Score=74, Evalue=3e-15, Organism=Escherichia coli, GI1790442, Length=119, Percent_Identity=33.6134453781513, Blast_Score=62, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000182 - InterPro: IPR016181 [H]
Pfam domain/function: PF00583 Acetyltransf_1 [H]
EC number: 2.3.1.-
Molecular weight: Translated: 15795; Mature: 15795
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRPYSPSDKSTVLDIWRAASAIAHPFLSQRLVAEAEAMIRDQFLDLAETWMIAPGATPV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH GFIALLGNEVGGLFVLPDHQGKGYGRALLDHVQARREALTLSVFAANHTARRFYEAYGFT HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC PLEERLNPFFKHKEIVMRLPS CHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MIRPYSPSDKSTVLDIWRAASAIAHPFLSQRLVAEAEAMIRDQFLDLAETWMIAPGATPV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHH GFIALLGNEVGGLFVLPDHQGKGYGRALLDHVQARREALTLSVFAANHTARRFYEAYGFT HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCC PLEERLNPFFKHKEIVMRLPS CHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2180922; 8041620; 9278503 [H]