| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is mco [H]
Identifier: 99080130
GI number: 99080130
Start: 295557
End: 296987
Strand: Reverse
Name: mco [H]
Synonym: TM1040_0289
Alternate gene names: 99080130
Gene position: 296987-295557 (Counterclockwise)
Preceding gene: 99080139
Following gene: 99080126
Centisome position: 9.28
GC content: 65.2
Gene sequence:
>1431_bases ATGACATCGAAATCCAAAAGGTGTGTCATGAACCCCAGCCGTCGCCATGTCCTTGCAGGTCTCACCGCATGTGCCAGCCT GCCCGCCCTGCCCCGCTTTGCACAGGCCAGCACAGAGACAAATGTGGAATCAGCGGCGCATCGTCTGACCCTTGCCCCGG CCCGCCAGCAGATTGCACCAACCGACTATCCCGCCACAGATCTGTGGTGCGTCAACGGCACAATGCCGGGCGAAACCCTG CGCCGGACACAGGGCGCGCGTCTGGTGGTTGAGGTCGACAACCAGCTCCCGCAGGCCACAAGCCTCCATTGGCACGGCAT CCGCATCGACAATGCCATGGACGGGGTGCCGGGCGTCACCCAGGATCCGATCCAGCCCGGCACGCGCTTCACCTATGACT TCGCCCTGCCCGATGCGGGCACATATTGGTATCATTCCCACGCGCAATCGGTGGAGCAGGTCGAACGTGGCCTGCAAGGC GCATTGATCATCGAAGAACCCGACGCGCCCGACGTGGATCAGGACCTGCCGCTGGTGATCGACGACCTGCGCGTCACAGC CGAGGCGGCGATAGATGCCAATTTCGCCGTGCCGCACGATCTGTCACACGCCGGGCGCATGGGGAACATCCTGCTCTGCA ATGGCAAAATGGTTGCCGATCATCCCGTCAAAACCGGAGACCGCTTGCGCCTGCGCCTCATCAACAGCGCCAATGCGCGT ATCTTCACCCTCGGCCTGCAGGGCCTCGAGGGCTGGGTGATGGCCTATGACGGTATGCCGCTGGCCACCCCTGAGGCGCT GCCGGACCGGCTCCTGCTTGCCCCCGCCCAGCGCGTCGACCTCTTTGTGGATGTGACCGCAGCCGCAGGCGAAGACGCCT TCCTTGTACAGTTTGAACGCGATGGTGGCTACGAGCTTGCGCGCTTCCCGGTGGCTTCCGGCACCCGCGCCCGCCGCCCC GCGCCCAGCGCTCTGCCCCCCAATCCCGACTTCCCGATCGACCTCCCGTCCGCGCGCAGCGTCGATCTCATCACCGAGGG CGGCGCGATGGCGTGGCTCAGCGGCGCCAGGTTCAAGGGCGAGGATCTCTCCGGTCAGGATCTCGCCCAATTGGGGCAGT TCTGGGCGTTCAACGGCAGCGCCGGCCGCCCGCCTGAGCCCTTTGTGACCGCGCGCCTCGGCGAGACCATTCGCATCCGC ATGGTCAACGACACTCGCTTTCCGCATGCGATGCACCTCCATGGCATGCATTTCTCCGAGGTCCGTGCGGACGGCAGCCT CGGCCCCCTGCGCGACACACTCCTGATGCTGCAGGGAGAGACCCGCGAGATCGCTTTTCAGGCGCACAACGCAGGCGACT GGCTCTTTCACTGCCATATGTTGTCGCATCACGCCGCGGGCATGGGCACATGGGTGCGCGTCACAGCCTGA
Upstream 100 bases:
>100_bases CCAGACGCAAGCCCCGACCAGCTCCTCGCTGAACGCTTCACAAATGCGACAGCTTCCAGTGGGTGGAAGTCTTGCCCCCG CGCGGCCGCCCACTAGGGTT
Downstream 100 bases:
>100_bases CGCCGCCCTTTCTTCTAACAGAAAATATCCCCGCCGGAGGCCTTCAGGTTTTGTCCGCAAAACCTGATTTACTCTCCTTG GCGCTGGATGCGTTTCTTGG
Product: multicopper oxidase, type 3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 476; Mature: 475
Protein sequence:
>476_residues MTSKSKRCVMNPSRRHVLAGLTACASLPALPRFAQASTETNVESAAHRLTLAPARQQIAPTDYPATDLWCVNGTMPGETL RRTQGARLVVEVDNQLPQATSLHWHGIRIDNAMDGVPGVTQDPIQPGTRFTYDFALPDAGTYWYHSHAQSVEQVERGLQG ALIIEEPDAPDVDQDLPLVIDDLRVTAEAAIDANFAVPHDLSHAGRMGNILLCNGKMVADHPVKTGDRLRLRLINSANAR IFTLGLQGLEGWVMAYDGMPLATPEALPDRLLLAPAQRVDLFVDVTAAAGEDAFLVQFERDGGYELARFPVASGTRARRP APSALPPNPDFPIDLPSARSVDLITEGGAMAWLSGARFKGEDLSGQDLAQLGQFWAFNGSAGRPPEPFVTARLGETIRIR MVNDTRFPHAMHLHGMHFSEVRADGSLGPLRDTLLMLQGETREIAFQAHNAGDWLFHCHMLSHHAAGMGTWVRVTA
Sequences:
>Translated_476_residues MTSKSKRCVMNPSRRHVLAGLTACASLPALPRFAQASTETNVESAAHRLTLAPARQQIAPTDYPATDLWCVNGTMPGETL RRTQGARLVVEVDNQLPQATSLHWHGIRIDNAMDGVPGVTQDPIQPGTRFTYDFALPDAGTYWYHSHAQSVEQVERGLQG ALIIEEPDAPDVDQDLPLVIDDLRVTAEAAIDANFAVPHDLSHAGRMGNILLCNGKMVADHPVKTGDRLRLRLINSANAR IFTLGLQGLEGWVMAYDGMPLATPEALPDRLLLAPAQRVDLFVDVTAAAGEDAFLVQFERDGGYELARFPVASGTRARRP APSALPPNPDFPIDLPSARSVDLITEGGAMAWLSGARFKGEDLSGQDLAQLGQFWAFNGSAGRPPEPFVTARLGETIRIR MVNDTRFPHAMHLHGMHFSEVRADGSLGPLRDTLLMLQGETREIAFQAHNAGDWLFHCHMLSHHAAGMGTWVRVTA >Mature_475_residues TSKSKRCVMNPSRRHVLAGLTACASLPALPRFAQASTETNVESAAHRLTLAPARQQIAPTDYPATDLWCVNGTMPGETLR RTQGARLVVEVDNQLPQATSLHWHGIRIDNAMDGVPGVTQDPIQPGTRFTYDFALPDAGTYWYHSHAQSVEQVERGLQGA LIIEEPDAPDVDQDLPLVIDDLRVTAEAAIDANFAVPHDLSHAGRMGNILLCNGKMVADHPVKTGDRLRLRLINSANARI FTLGLQGLEGWVMAYDGMPLATPEALPDRLLLAPAQRVDLFVDVTAAAGEDAFLVQFERDGGYELARFPVASGTRARRPA PSALPPNPDFPIDLPSARSVDLITEGGAMAWLSGARFKGEDLSGQDLAQLGQFWAFNGSAGRPPEPFVTARLGETIRIRM VNDTRFPHAMHLHGMHFSEVRADGSLGPLRDTLLMLQGETREIAFQAHNAGDWLFHCHMLSHHAAGMGTWVRVTA
Specific function: May be involved in copper homeostasis and oxidative stress response [H]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the multicopper oxidase family [H]
Homologues:
Organism=Escherichia coli, GI1786314, Length=456, Percent_Identity=26.5350877192982, Blast_Score=105, Evalue=9e-24, Organism=Escherichia coli, GI1789394, Length=450, Percent_Identity=27.1111111111111, Blast_Score=82, Evalue=7e-17, Organism=Saccharomyces cerevisiae, GI6323703, Length=452, Percent_Identity=23.8938053097345, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321067, Length=250, Percent_Identity=24.8, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI18859919, Length=266, Percent_Identity=28.9473684210526, Blast_Score=88, Evalue=1e-17, Organism=Drosophila melanogaster, GI28574104, Length=100, Percent_Identity=43, Blast_Score=75, Evalue=7e-14, Organism=Drosophila melanogaster, GI221330000, Length=286, Percent_Identity=26.5734265734266, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24585842, Length=286, Percent_Identity=26.5734265734266, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI281360167, Length=286, Percent_Identity=26.5734265734266, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI221329998, Length=286, Percent_Identity=26.5734265734266, Blast_Score=74, Evalue=2e-13, Organism=Drosophila melanogaster, GI24650186, Length=306, Percent_Identity=24.5098039215686, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001117 - InterPro: IPR011706 - InterPro: IPR011707 - InterPro: IPR002355 - InterPro: IPR008972 [H]
Pfam domain/function: PF00394 Cu-oxidase; PF07731 Cu-oxidase_2; PF07732 Cu-oxidase_3 [H]
EC number: NA
Molecular weight: Translated: 51846; Mature: 51715
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00079 MULTICOPPER_OXIDASE1 ; PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSKSKRCVMNPSRRHVLAGLTACASLPALPRFAQASTETNVESAAHRLTLAPARQQIAP CCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHEEEECCCHHHCCC TDYPATDLWCVNGTMPGETLRRTQGARLVVEVDNQLPQATSLHWHGIRIDNAMDGVPGVT CCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC QDPIQPGTRFTYDFALPDAGTYWYHSHAQSVEQVERGLQGALIIEEPDAPDVDQDLPLVI CCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEE DDLRVTAEAAIDANFAVPHDLSHAGRMGNILLCNGKMVADHPVKTGDRLRLRLINSANAR ECCEEEEHHHCCCCCCCCCCCHHCCCCCCEEEECCEEEECCCCCCCCEEEEEEEECCCCE IFTLGLQGLEGWVMAYDGMPLATPEALPDRLLLAPAQRVDLFVDVTAAAGEDAFLVQFER EEEEECCCCCCEEEEECCCCCCCCHHCCCCEEECCCCCEEEEEEEEECCCCCEEEEEEEC DGGYELARFPVASGTRARRPAPSALPPNPDFPIDLPSARSVDLITEGGAMAWLSGARFKG CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCC EDLSGQDLAQLGQFWAFNGSAGRPPEPFVTARLGETIRIRMVNDTRFPHAMHLHGMHFSE CCCCCHHHHHHHHEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEECCCCHHH VRADGSLGPLRDTLLMLQGETREIAFQAHNAGDWLFHCHMLSHHAAGMGTWVRVTA HCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEHHHCCCCCCCEEEEEC >Mature Secondary Structure TSKSKRCVMNPSRRHVLAGLTACASLPALPRFAQASTETNVESAAHRLTLAPARQQIAP CCCCCCEEECCCHHHHHHHHHHHHCCCCCCCHHHCCCCCCHHHHHHEEEECCCHHHCCC TDYPATDLWCVNGTMPGETLRRTQGARLVVEVDNQLPQATSLHWHGIRIDNAMDGVPGVT CCCCCCEEEEECCCCCHHHHHHCCCCEEEEEECCCCCCCCCEEEEEEEECCCCCCCCCCC QDPIQPGTRFTYDFALPDAGTYWYHSHAQSVEQVERGLQGALIIEEPDAPDVDQDLPLVI CCCCCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEE DDLRVTAEAAIDANFAVPHDLSHAGRMGNILLCNGKMVADHPVKTGDRLRLRLINSANAR ECCEEEEHHHCCCCCCCCCCCHHCCCCCCEEEECCEEEECCCCCCCCEEEEEEEECCCCE IFTLGLQGLEGWVMAYDGMPLATPEALPDRLLLAPAQRVDLFVDVTAAAGEDAFLVQFER EEEEECCCCCCEEEEECCCCCCCCHHCCCCEEECCCCCEEEEEEEEECCCCCEEEEEEEC DGGYELARFPVASGTRARRPAPSALPPNPDFPIDLPSARSVDLITEGGAMAWLSGARFKG CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCC EDLSGQDLAQLGQFWAFNGSAGRPPEPFVTARLGETIRIRMVNDTRFPHAMHLHGMHFSE CCCCCHHHHHHHHEEEECCCCCCCCCCEEEEECCCEEEEEEEECCCCCCEEEECCCCHHH VRADGSLGPLRDTLLMLQGETREIAFQAHNAGDWLFHCHMLSHHAAGMGTWVRVTA HCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCEEEEEEEHHHCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12950922 [H]