| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is adk [H]
Identifier: 99080117
GI number: 99080117
Start: 283078
End: 283659
Strand: Direct
Name: adk [H]
Synonym: TM1040_0276
Alternate gene names: 99080117
Gene position: 283078-283659 (Clockwise)
Preceding gene: 99080116
Following gene: 99080118
Centisome position: 8.84
GC content: 61.51
Gene sequence:
>582_bases ATGACCAATATTATTCTTCTGGGCCCGCCCGGCGCGGGCAAGGGAACGCAGGCCAGCCACCTGGTCAAGACCCGCAACAT GACCCAGCTCTCCACCGGGGACATGCTGCGCGCGGCGCAGTCCTCCGGCTCCGAGATGGGCAAGAAGGTCGCGGCGATCA TGGCCGAGGGCAAGCTCGTCACGGATCAGATCGTGATCGGTCTTATTCGCGAGCGTCTGCAAGAAGGTTCCGAGGGCGGC TTCATCTTTGACGGCTTCCCACGCACCCTCGCGCAGGCAGACGCGCTCGAGAAGCTCCTGACCGAAATGGGCCTGAAGCT TGATGCAGTGATCGAGATGCAGGTGGATGACGAGGTGCTCGTGAAGCGCATCGTCAACCGCGCCGAAGAGGCCCGCGCTG CGGGCAAGGAAGCGCGCGCCGATGACAATGAGGACTCGGTCCGTATCCGGCTGATGGAATACTACAAGAAGACCTCGCCG CTTATCGGCTATTACTGGGCCAAGGGCAATCTGCAGCGTCTGGACGGCATGGCCTCCATCGACGAAGTGCAGAAATCCAT CGCTTGGATTCTGGGCGACTGA
Upstream 100 bases:
>100_bases TACAGAGCCATCTTCTCGCGCATCAGTACGAAGGCCTCATTGAGAAGAGCCAGCTGCGCGGTCGGAACAAGAAACGCACC AAACGGGGACCGTCTCGTCG
Downstream 100 bases:
>100_bases TCGCACCCGTCGCGTTCACGCGGTGCATGAAATAGACCAGACAGGCTGCCCTTGGGCGGCCTGTTTTGTTTTGGACGCAG GGCAGGGCGCAGGGGTGGGC
Product: adenylate kinase
Products: NA
Alternate protein names: AK; ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTNIILLGPPGAGKGTQASHLVKTRNMTQLSTGDMLRAAQSSGSEMGKKVAAIMAEGKLVTDQIVIGLIRERLQEGSEGG FIFDGFPRTLAQADALEKLLTEMGLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGKEARADDNEDSVRIRLMEYYKKTSP LIGYYWAKGNLQRLDGMASIDEVQKSIAWILGD
Sequences:
>Translated_193_residues MTNIILLGPPGAGKGTQASHLVKTRNMTQLSTGDMLRAAQSSGSEMGKKVAAIMAEGKLVTDQIVIGLIRERLQEGSEGG FIFDGFPRTLAQADALEKLLTEMGLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGKEARADDNEDSVRIRLMEYYKKTSP LIGYYWAKGNLQRLDGMASIDEVQKSIAWILGD >Mature_192_residues TNIILLGPPGAGKGTQASHLVKTRNMTQLSTGDMLRAAQSSGSEMGKKVAAIMAEGKLVTDQIVIGLIRERLQEGSEGGF IFDGFPRTLAQADALEKLLTEMGLKLDAVIEMQVDDEVLVKRIVNRAEEARAAGKEARADDNEDSVRIRLMEYYKKTSPL IGYYWAKGNLQRLDGMASIDEVQKSIAWILGD
Specific function: Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. This small ubiquitous enzyme involved in the energy metabolism and nucleotide synthesis, is essential for maintenance and cell growth [H]
COG id: COG0563
COG function: function code F; Adenylate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family [H]
Homologues:
Organism=Homo sapiens, GI4502013, Length=205, Percent_Identity=42.4390243902439, Blast_Score=156, Evalue=1e-38, Organism=Homo sapiens, GI7524346, Length=205, Percent_Identity=42.4390243902439, Blast_Score=155, Evalue=1e-38, Organism=Homo sapiens, GI4502011, Length=190, Percent_Identity=33.6842105263158, Blast_Score=122, Evalue=1e-28, Organism=Homo sapiens, GI7706497, Length=196, Percent_Identity=30.1020408163265, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI28144897, Length=182, Percent_Identity=31.8681318681319, Blast_Score=97, Evalue=7e-21, Organism=Homo sapiens, GI19923437, Length=193, Percent_Identity=31.0880829015544, Blast_Score=97, Evalue=7e-21, Organism=Homo sapiens, GI28144899, Length=182, Percent_Identity=31.8681318681319, Blast_Score=97, Evalue=8e-21, Organism=Homo sapiens, GI310110345, Length=193, Percent_Identity=26.9430051813472, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI53832003, Length=193, Percent_Identity=26.9430051813472, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI8051579, Length=193, Percent_Identity=26.9430051813472, Blast_Score=83, Evalue=1e-16, Organism=Homo sapiens, GI53832001, Length=193, Percent_Identity=26.9430051813472, Blast_Score=83, Evalue=1e-16, Organism=Escherichia coli, GI1786680, Length=216, Percent_Identity=45.8333333333333, Blast_Score=169, Evalue=8e-44, Organism=Caenorhabditis elegans, GI17552384, Length=211, Percent_Identity=36.9668246445498, Blast_Score=143, Evalue=7e-35, Organism=Caenorhabditis elegans, GI17567503, Length=184, Percent_Identity=37.5, Blast_Score=128, Evalue=2e-30, Organism=Caenorhabditis elegans, GI17533833, Length=194, Percent_Identity=28.8659793814433, Blast_Score=92, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17550688, Length=196, Percent_Identity=27.5510204081633, Blast_Score=84, Evalue=6e-17, Organism=Caenorhabditis elegans, GI25147457, Length=196, Percent_Identity=31.1224489795918, Blast_Score=70, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6320432, Length=189, Percent_Identity=39.1534391534392, Blast_Score=137, Evalue=9e-34, Organism=Saccharomyces cerevisiae, GI6322828, Length=188, Percent_Identity=30.3191489361702, Blast_Score=104, Evalue=7e-24, Organism=Saccharomyces cerevisiae, GI6321018, Length=198, Percent_Identity=32.8282828282828, Blast_Score=98, Evalue=9e-22, Organism=Drosophila melanogaster, GI22026816, Length=211, Percent_Identity=40.2843601895735, Blast_Score=148, Evalue=2e-36, Organism=Drosophila melanogaster, GI17647141, Length=167, Percent_Identity=35.9281437125749, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI24663208, Length=167, Percent_Identity=35.9281437125749, Blast_Score=105, Evalue=2e-23, Organism=Drosophila melanogaster, GI221459597, Length=181, Percent_Identity=31.4917127071823, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI21356893, Length=181, Percent_Identity=31.4917127071823, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI17737899, Length=193, Percent_Identity=34.1968911917098, Blast_Score=101, Evalue=4e-22, Organism=Drosophila melanogaster, GI24645822, Length=193, Percent_Identity=34.1968911917098, Blast_Score=101, Evalue=4e-22,
Paralogues:
None
Copy number: 1640 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 60 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 847 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000850 [H]
Pfam domain/function: PF00406 ADK [H]
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 21113; Mature: 20981
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: PS00113 ADENYLATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNIILLGPPGAGKGTQASHLVKTRNMTQLSTGDMLRAAQSSGSEMGKKVAAIMAEGKLV CCCEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCHH TDQIVIGLIRERLQEGSEGGFIFDGFPRTLAQADALEKLLTEMGLKLDAVIEMQVDDEVL HHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHH VKRIVNRAEEARAAGKEARADDNEDSVRIRLMEYYKKTSPLIGYYWAKGNLQRLDGMASI HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCHHHH DEVQKSIAWILGD HHHHHHHHHHCCC >Mature Secondary Structure TNIILLGPPGAGKGTQASHLVKTRNMTQLSTGDMLRAAQSSGSEMGKKVAAIMAEGKLV CCEEEECCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCHH TDQIVIGLIRERLQEGSEGGFIFDGFPRTLAQADALEKLLTEMGLKLDAVIEMQVDDEVL HHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCHHHH VKRIVNRAEEARAAGKEARADDNEDSVRIRLMEYYKKTSPLIGYYWAKGNLQRLDGMASI HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCHHHH DEVQKSIAWILGD HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA