| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080092
Identifier: 99080092
GI number: 99080092
Start: 268431
End: 268688
Strand: Direct
Name: 99080092
Synonym: TM1040_0251
Alternate gene names: NA
Gene position: 268431-268688 (Clockwise)
Preceding gene: 99080091
Following gene: 99080093
Centisome position: 8.39
GC content: 46.12
Gene sequence:
>258_bases TTGAGCGAGATAAATGAAATTTTGGACTCTGCTGGAGAGACTTATTGGCAGTCAAAAGTCGAAGAGGCCTTTGCTCGTTC AGGTGACAGACAAAGGGATCTGATCGCTTCTTGGTTTGGAGGGATGGGCTCGTTCTCCGACTTAATGCTCATGAAAATCA ATGGCCACACTGTTGAAGAAGACCAAGAGCCTCAGTTAAATGAGAGGCTACGTATGCTCAGGAGTGAATTGTACAGCTTG ATAAGGGCGAGGAACTGA
Upstream 100 bases:
>100_bases CACAGTCAACGGGTGTTGGCCAATTGCTTGGCGGCGGCAGTCAAGTGTACGTTCCAAGGGTTGATACAAAATGGCTCCAC TGAGGCAAGTTTAGCAGGTT
Downstream 100 bases:
>100_bases CGCTGCTCTCGCGGTTCTCTTCCCCATTGCCACCCCCTCCAACCTCTGCTACATCGCACCAATCCTGACAGGCCTCGGAT TCGTTCCGGGGCCGTTATCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 85; Mature: 84
Protein sequence:
>85_residues MSEINEILDSAGETYWQSKVEEAFARSGDRQRDLIASWFGGMGSFSDLMLMKINGHTVEEDQEPQLNERLRMLRSELYSL IRARN
Sequences:
>Translated_85_residues MSEINEILDSAGETYWQSKVEEAFARSGDRQRDLIASWFGGMGSFSDLMLMKINGHTVEEDQEPQLNERLRMLRSELYSL IRARN >Mature_84_residues SEINEILDSAGETYWQSKVEEAFARSGDRQRDLIASWFGGMGSFSDLMLMKINGHTVEEDQEPQLNERLRMLRSELYSLI RARN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9856; Mature: 9725
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEINEILDSAGETYWQSKVEEAFARSGDRQRDLIASWFGGMGSFSDLMLMKINGHTVEE CCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHEECCCCCCCC DQEPQLNERLRMLRSELYSLIRARN CCCCCHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEINEILDSAGETYWQSKVEEAFARSGDRQRDLIASWFGGMGSFSDLMLMKINGHTVEE CHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHEECCCCCCCC DQEPQLNERLRMLRSELYSLIRARN CCCCCHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA