Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is secE [C]

Identifier: 99080067

GI number: 99080067

Start: 241515

End: 241712

Strand: Direct

Name: secE [C]

Synonym: TM1040_0226

Alternate gene names: 99080067

Gene position: 241515-241712 (Clockwise)

Preceding gene: 99080066

Following gene: 99080068

Centisome position: 7.55

GC content: 59.09

Gene sequence:

>198_bases
ATGGCCACCATCAATCCCGTTAAGTTCATCCAGCAGGTGCGCGCAGAAGTCAGCAAGGTTGTCTGGCCGACCCGTCGCGA
GGTTCTGCTGACCACGGTCATGGTGTTCATCATGGCGGCTCTGGCTGCGGCATTCTTTGCTGTGGTGGACCTCTTGATCC
GCACCGGTCTCAACGGTGTGCTCGGGCTCTTTGGCTGA

Upstream 100 bases:

>100_bases
TTCAGCCGGAGGGTGCCTCTCACAAGCAGCGGCTCTTGAATTTGCCCCCGCTCTCGGGTAGATCGCCCTCCTAGTCGACA
AGAGAGAGTGCGAGAGCCCT

Downstream 100 bases:

>100_bases
GGCAGGCATTTGCAGCGCCGCCTTCGTCGCGGCGCCGTTGCCTCTTGATCTTGCCCGCGCAGGGGGATAGTTCAGCCGAT
ACTGGATGAGGCGTGCGGCG

Product: preprotein translocase subunit SecE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MATINPVKFIQQVRAEVSKVVWPTRREVLLTTVMVFIMAALAAAFFAVVDLLIRTGLNGVLGLFG

Sequences:

>Translated_65_residues
MATINPVKFIQQVRAEVSKVVWPTRREVLLTTVMVFIMAALAAAFFAVVDLLIRTGLNGVLGLFG
>Mature_64_residues
ATINPVKFIQQVRAEVSKVVWPTRREVLLTTVMVFIMAALAAAFFAVVDLLIRTGLNGVLGLFG

Specific function: Essential For Protein Export. [C]

COG id: COG0690

COG function: function code U; Preprotein translocase subunit SecE

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7105; Mature: 6974

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATINPVKFIQQVRAEVSKVVWPTRREVLLTTVMVFIMAALAAAFFAVVDLLIRTGLNGV
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
LGLFG
HHCCC
>Mature Secondary Structure 
ATINPVKFIQQVRAEVSKVVWPTRREVLLTTVMVFIMAALAAAFFAVVDLLIRTGLNGV
CCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHH
LGLFG
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA