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The map label for this gene is nusG [H]

Identifier: 99080068

GI number: 99080068

Start: 241908

End: 242441

Strand: Direct

Name: nusG [H]

Synonym: TM1040_0227

Alternate gene names: 99080068

Gene position: 241908-242441 (Clockwise)

Preceding gene: 99080067

Following gene: 99080069

Centisome position: 7.56

GC content: 57.49

Gene sequence:

>534_bases
ATGGCGAAACGGTGGTATTCGGTCAGCGTTCTTTCGAACTTCGAAAAGAAAATCGCAGAACAGATTCGCACCGCGGTCGT
GGAGCAGGGTCTAGAGGACGAGATCGACGAGGTTCTGGTTCCCACCGAGGAAGTGATCGAAATTCGCCGGGGCAAGAAAG
TCTCGACCGAGCGCCGCTTCATGCCGGGCTATGTTCTGGTTCACATGGAAATGTCCGACCAGGGCTATCACCTGATTTCT
TCCATCAATCGCGTCACCGGTTTCCTCGGTCCGCAAGGCCGCCCGATGCCGATGCGTGATGCCGAAGTGCAGGGCATCCT
GGGCCGCGTCGAAGAAGGTGTCGAGGCGCCGCGTACACTCATTTCCTTTGAGGTGGGCGAAAAGGTCAAAGTCAACGACG
GCCCCTTCGAGGATTTCGACGGTATGGTCGAGGGCGTGGACGACGAGAACCAGAAGCTCAAGGTCACGGTGTCCATCTTT
GGTCGCGAGACCCCGGTGGAGCTCGACTTCACGCAGGTCACCAAACAGGTTTGA

Upstream 100 bases:

>100_bases
CGGCGATTCGCACGCCGATTTTTGTTGCACCGCAGCCACTGGGCTGCACAGAGATATTTTGCGGCAAAGCCCGCAGGGAA
CAAGAAGGACGAGCAGGTTC

Downstream 100 bases:

>100_bases
TCTGCGCCGGTTTCCGGCGCTACACGGAATTTCCCATTGGGAACTTGAGGATCGGCCCCTAAAATGGGGCCGATTTTTGT
TTGGTCCGCCGGAGTTCCCG

Product: transcription antitermination protein nusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MAKRWYSVSVLSNFEKKIAEQIRTAVVEQGLEDEIDEVLVPTEEVIEIRRGKKVSTERRFMPGYVLVHMEMSDQGYHLIS
SINRVTGFLGPQGRPMPMRDAEVQGILGRVEEGVEAPRTLISFEVGEKVKVNDGPFEDFDGMVEGVDDENQKLKVTVSIF
GRETPVELDFTQVTKQV

Sequences:

>Translated_177_residues
MAKRWYSVSVLSNFEKKIAEQIRTAVVEQGLEDEIDEVLVPTEEVIEIRRGKKVSTERRFMPGYVLVHMEMSDQGYHLIS
SINRVTGFLGPQGRPMPMRDAEVQGILGRVEEGVEAPRTLISFEVGEKVKVNDGPFEDFDGMVEGVDDENQKLKVTVSIF
GRETPVELDFTQVTKQV
>Mature_176_residues
AKRWYSVSVLSNFEKKIAEQIRTAVVEQGLEDEIDEVLVPTEEVIEIRRGKKVSTERRFMPGYVLVHMEMSDQGYHLISS
INRVTGFLGPQGRPMPMRDAEVQGILGRVEEGVEAPRTLISFEVGEKVKVNDGPFEDFDGMVEGVDDENQKLKVTVSIFG
RETPVELDFTQVTKQV

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=174, Percent_Identity=52.8735632183908, Blast_Score=185, Evalue=1e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20017; Mature: 19886

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS01014 NUSG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRWYSVSVLSNFEKKIAEQIRTAVVEQGLEDEIDEVLVPTEEVIEIRRGKKVSTERRF
CCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
MPGYVLVHMEMSDQGYHLISSINRVTGFLGPQGRPMPMRDAEVQGILGRVEEGVEAPRTL
CCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHE
ISFEVGEKVKVNDGPFEDFDGMVEGVDDENQKLKVTVSIFGRETPVELDFTQVTKQV
EEEECCCEEEECCCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEECHHHHHHCC
>Mature Secondary Structure 
AKRWYSVSVLSNFEKKIAEQIRTAVVEQGLEDEIDEVLVPTEEVIEIRRGKKVSTERRF
CCCEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHCCCCCCCCCCC
MPGYVLVHMEMSDQGYHLISSINRVTGFLGPQGRPMPMRDAEVQGILGRVEEGVEAPRTL
CCCEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHE
ISFEVGEKVKVNDGPFEDFDGMVEGVDDENQKLKVTVSIFGRETPVELDFTQVTKQV
EEEECCCEEEECCCCCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCEECHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]