| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99080061
Identifier: 99080061
GI number: 99080061
Start: 235564
End: 235827
Strand: Direct
Name: 99080061
Synonym: TM1040_0220
Alternate gene names: NA
Gene position: 235564-235827 (Clockwise)
Preceding gene: 99080059
Following gene: 99080062
Centisome position: 7.36
GC content: 49.62
Gene sequence:
>264_bases ATGTTTTCTTACCAATATCTGACTGTGCTGGCAAGCCAGCCTGTCGTAACTATGCATTTACGGATTTCTGCAAGTTTATC GGTTAATATCTGCTGGAATCACTATGTATGCGTGCACGAGCCAGCAGAGCAGGAAGCTTCTGGAGAATTGCCGGAGTTTC GACAGCTGACCAACGCGCGGCTTGGAGTTTTCGTCGCCCCGATTGCAGAGCAACCCGGGGTTTTTGTGATATTGGTTCTT GCGCCTGCCAATCGGTCGTTTTGA
Upstream 100 bases:
>100_bases ATAAAACATCTTTGGCACACGCCGCGCATAAATACGCTTGAGATCTTCGATGTTGGTGATCACTGGCATGGGGGGCTCCT CGACCTGCGCAGAACTGGTA
Downstream 100 bases:
>100_bases CCGGGCAGCAGCCCACGGGGCGGGCGCCAGTTGGAGTGAGAGACAACGTGAGAGTTGTGTTTTCAGATCGGGATCTGGCT GGCATGCGTATTTCTGCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 87; Mature: 87
Protein sequence:
>87_residues MFSYQYLTVLASQPVVTMHLRISASLSVNICWNHYVCVHEPAEQEASGELPEFRQLTNARLGVFVAPIAEQPGVFVILVL APANRSF
Sequences:
>Translated_87_residues MFSYQYLTVLASQPVVTMHLRISASLSVNICWNHYVCVHEPAEQEASGELPEFRQLTNARLGVFVAPIAEQPGVFVILVL APANRSF >Mature_87_residues MFSYQYLTVLASQPVVTMHLRISASLSVNICWNHYVCVHEPAEQEASGELPEFRQLTNARLGVFVAPIAEQPGVFVILVL APANRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9674; Mature: 9674
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSYQYLTVLASQPVVTMHLRISASLSVNICWNHYVCVHEPAEQEASGELPEFRQLTNAR CCCCEEEEEECCCCEEEEEEEEEEEEEEEEEECEEEEEECCCCCCCCCCCHHHHHHCCCC LGVFVAPIAEQPGVFVILVLAPANRSF EEEEEEECCCCCCEEEEEEEECCCCCC >Mature Secondary Structure MFSYQYLTVLASQPVVTMHLRISASLSVNICWNHYVCVHEPAEQEASGELPEFRQLTNAR CCCCEEEEEECCCCEEEEEEEEEEEEEEEEEECEEEEEECCCCCCCCCCCHHHHHHCCCC LGVFVAPIAEQPGVFVILVLAPANRSF EEEEEEECCCCCCEEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA