Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is cmk [H]

Identifier: 99080038

GI number: 99080038

Start: 215228

End: 215839

Strand: Reverse

Name: cmk [H]

Synonym: TM1040_0197

Alternate gene names: 99080038

Gene position: 215839-215228 (Counterclockwise)

Preceding gene: 99080039

Following gene: 99080037

Centisome position: 6.74

GC content: 64.05

Gene sequence:

>612_bases
ATGGCCTTTACGATTGCAATCGACGGCCCAGCCGCTGCAGGCAAGGGCACCATTTCCAAAGCGGTTGCCGCGCATTTTGG
CTTTGGTCACCTTGATACAGGCCTGCTCTATCGTGCCGTCGGGGCGAAAATGCTGGATGGGGACAATCCCGTTGCCGCCG
CCGAAGCGCTTGATGTGAGCGATCTGGATCGCGAAGACCTGCGCACACCAGAGGTGGCTCAGGCAGCCTCAAAGGTGGCC
GTGATTGCAGCAGTTCGCGCCGCTTTGGTGGATTTTCAACGCGCCTTTGCCCGCCGATCGGGCGGCGCGGTGATGGACGG
GCGCGACATCGGCACCGTGATCTGCCCCGAAGCTGAGGCCAAGCTCTTTGTGACGGCCAGCGCCGACGTGCGGGCGCGGC
GGCGGTTTCTGGAGCTGACCGCCAAGGGAAGCGTCATTACGCTCGATGAGGTTCTCGCTGATGTCAAAGCGCGGGACGAG
CGCGATATGAACCGCGCCGAAGCGCCGCTGCGGCCAGCAGAGGATGCGGTCATCATCGACACCAGCGCCCTCAGCATCGA
CGACGCCGTCGCAAAGGCGATTGCCGCGATCGAGGCGCGCAAGCCCCGCTAG

Upstream 100 bases:

>100_bases
GGATCGACGATTCCTATCGCTGGCGCCCCCAACCCGCGTGACAGGCGCGGCAAGCTTAAGTAGACAAGACCCCTGACCTT
TCCGACCCATGAGGACACAT

Downstream 100 bases:

>100_bases
ACCCAACGTCATTTGAGGTCCATTTTGGCTGTCGCGCAGCTGCGCGCCACCATCGACCCAATAAAACTTGAATATGGGGG
TTGTTGCCCATTCCCTTGGC

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MAFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVSDLDREDLRTPEVAQAASKVA
VIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEAKLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDE
RDMNRAEAPLRPAEDAVIIDTSALSIDDAVAKAIAAIEARKPR

Sequences:

>Translated_203_residues
MAFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVSDLDREDLRTPEVAQAASKVA
VIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEAKLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDE
RDMNRAEAPLRPAEDAVIIDTSALSIDDAVAKAIAAIEARKPR
>Mature_202_residues
AFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVSDLDREDLRTPEVAQAASKVAV
IAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEAKLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDER
DMNRAEAPLRPAEDAVIIDTSALSIDDAVAKAIAAIEARKPR

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787139, Length=215, Percent_Identity=43.2558139534884, Blast_Score=149, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003136
- InterPro:   IPR011994 [H]

Pfam domain/function: PF02224 Cytidylate_kin [H]

EC number: =2.7.4.14 [H]

Molecular weight: Translated: 21280; Mature: 21149

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVS
CEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
DLDREDLRTPEVAQAASKVAVIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEA
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEECCCCCC
KLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDERDMNRAEAPLRPAEDAVIID
EEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEEEE
TSALSIDDAVAKAIAAIEARKPR
CCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVS
EEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC
DLDREDLRTPEVAQAASKVAVIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEA
CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEECCCCCC
KLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDERDMNRAEAPLRPAEDAVIID
EEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEEEE
TSALSIDDAVAKAIAAIEARKPR
CCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA