| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is cmk [H]
Identifier: 99080038
GI number: 99080038
Start: 215228
End: 215839
Strand: Reverse
Name: cmk [H]
Synonym: TM1040_0197
Alternate gene names: 99080038
Gene position: 215839-215228 (Counterclockwise)
Preceding gene: 99080039
Following gene: 99080037
Centisome position: 6.74
GC content: 64.05
Gene sequence:
>612_bases ATGGCCTTTACGATTGCAATCGACGGCCCAGCCGCTGCAGGCAAGGGCACCATTTCCAAAGCGGTTGCCGCGCATTTTGG CTTTGGTCACCTTGATACAGGCCTGCTCTATCGTGCCGTCGGGGCGAAAATGCTGGATGGGGACAATCCCGTTGCCGCCG CCGAAGCGCTTGATGTGAGCGATCTGGATCGCGAAGACCTGCGCACACCAGAGGTGGCTCAGGCAGCCTCAAAGGTGGCC GTGATTGCAGCAGTTCGCGCCGCTTTGGTGGATTTTCAACGCGCCTTTGCCCGCCGATCGGGCGGCGCGGTGATGGACGG GCGCGACATCGGCACCGTGATCTGCCCCGAAGCTGAGGCCAAGCTCTTTGTGACGGCCAGCGCCGACGTGCGGGCGCGGC GGCGGTTTCTGGAGCTGACCGCCAAGGGAAGCGTCATTACGCTCGATGAGGTTCTCGCTGATGTCAAAGCGCGGGACGAG CGCGATATGAACCGCGCCGAAGCGCCGCTGCGGCCAGCAGAGGATGCGGTCATCATCGACACCAGCGCCCTCAGCATCGA CGACGCCGTCGCAAAGGCGATTGCCGCGATCGAGGCGCGCAAGCCCCGCTAG
Upstream 100 bases:
>100_bases GGATCGACGATTCCTATCGCTGGCGCCCCCAACCCGCGTGACAGGCGCGGCAAGCTTAAGTAGACAAGACCCCTGACCTT TCCGACCCATGAGGACACAT
Downstream 100 bases:
>100_bases ACCCAACGTCATTTGAGGTCCATTTTGGCTGTCGCGCAGCTGCGCGCCACCATCGACCCAATAAAACTTGAATATGGGGG TTGTTGCCCATTCCCTTGGC
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 203; Mature: 202
Protein sequence:
>203_residues MAFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVSDLDREDLRTPEVAQAASKVA VIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEAKLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDE RDMNRAEAPLRPAEDAVIIDTSALSIDDAVAKAIAAIEARKPR
Sequences:
>Translated_203_residues MAFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVSDLDREDLRTPEVAQAASKVA VIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEAKLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDE RDMNRAEAPLRPAEDAVIIDTSALSIDDAVAKAIAAIEARKPR >Mature_202_residues AFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVSDLDREDLRTPEVAQAASKVAV IAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEAKLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDER DMNRAEAPLRPAEDAVIIDTSALSIDDAVAKAIAAIEARKPR
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=215, Percent_Identity=43.2558139534884, Blast_Score=149, Evalue=1e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 21280; Mature: 21149
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVS CEEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC DLDREDLRTPEVAQAASKVAVIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEA CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEECCCCCC KLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDERDMNRAEAPLRPAEDAVIID EEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEEEE TSALSIDDAVAKAIAAIEARKPR CCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AFTIAIDGPAAAGKGTISKAVAAHFGFGHLDTGLLYRAVGAKMLDGDNPVAAAEALDVS EEEEEECCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHCCCC DLDREDLRTPEVAQAASKVAVIAAVRAALVDFQRAFARRSGGAVMDGRDIGTVICPEAEA CCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEECCCCCC KLFVTASADVRARRRFLELTAKGSVITLDEVLADVKARDERDMNRAEAPLRPAEDAVIID EEEEEECCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHCCHHHCCCCCCCCCEEEEE TSALSIDDAVAKAIAAIEARKPR CCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA