| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99079984
Identifier: 99079984
GI number: 99079984
Start: 156335
End: 156646
Strand: Reverse
Name: 99079984
Synonym: TM1040_0143
Alternate gene names: NA
Gene position: 156646-156335 (Counterclockwise)
Preceding gene: 99079986
Following gene: 99079983
Centisome position: 4.89
GC content: 59.29
Gene sequence:
>312_bases ATGCGTGCGCGGATTTACCGGCCAGCTCGAAACGCCATGACCTCTGGTATGGCCAAGACGCGGAAATGGGTGCTGGAATA CGCCCCTGCGGATGCGCGCGAGGTGGATCCGCTGATGGGCTGGACGTCGTCCTCCGACACCCAGAGCCAGGTGCGTCTCA AATTCGATACCAAGGAAGAGGCACTGGAATACGCCGATGACCACGGCATCGAAGTTGAAGTACACGAGCCCAAGACCCGC AAGCCTAATCTGCGGGCAGGTGGTTACGGAGAAAACTTCGCCACCAATAGACGCGGCCCTTGGACGCACTAA
Upstream 100 bases:
>100_bases CCGACATACAACCTCTGTTAAATGAGCGATATTTGCGACCTTGCCGCGCCCCATCATCCGTCGCATATAGATGCAAAGGA ATCTTCTTGAGGAGACAGCC
Downstream 100 bases:
>100_bases GTCCCTCAAAGACAGAGCACGCTCCTTCTTGAGGTGCCGTCAGATCCAAACAACAAAGCGCCCCACGGGCGCTTTTTCCA TATCTGGAGGTGGGGTCCGC
Product: ETC complex I subunit region
Products: NA
Alternate protein names: ETC Complex I Subunit Conserved Region; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; ETC Complex I Subunit Conserved Region Superfamily; Oxidoreductase Protein; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; NADHUbiquinone Oxidoreductase; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; NADH Dehydrogenase Fe-S; ETC Complex I Subunit Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein; NADH Dehydrogenase Subunit
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTR KPNLRAGGYGENFATNRRGPWTH
Sequences:
>Translated_103_residues MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTR KPNLRAGGYGENFATNRRGPWTH >Mature_103_residues MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTR KPNLRAGGYGENFATNRRGPWTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4505369, Length=99, Percent_Identity=42.4242424242424, Blast_Score=80, Evalue=3e-16, Organism=Caenorhabditis elegans, GI115533653, Length=100, Percent_Identity=41, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11808; Mature: 11808
Theoretical pI: Translated: 9.51; Mature: 9.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCHHH ALEYADDHGIEVEVHEPKTRKPNLRAGGYGENFATNRRGPWTH HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEE CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCHHH ALEYADDHGIEVEVHEPKTRKPNLRAGGYGENFATNRRGPWTH HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA