Definition Ruegeria sp. TM1040, complete genome.
Accession NC_008044
Length 3,200,938

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The map label for this gene is 99079984

Identifier: 99079984

GI number: 99079984

Start: 156335

End: 156646

Strand: Reverse

Name: 99079984

Synonym: TM1040_0143

Alternate gene names: NA

Gene position: 156646-156335 (Counterclockwise)

Preceding gene: 99079986

Following gene: 99079983

Centisome position: 4.89

GC content: 59.29

Gene sequence:

>312_bases
ATGCGTGCGCGGATTTACCGGCCAGCTCGAAACGCCATGACCTCTGGTATGGCCAAGACGCGGAAATGGGTGCTGGAATA
CGCCCCTGCGGATGCGCGCGAGGTGGATCCGCTGATGGGCTGGACGTCGTCCTCCGACACCCAGAGCCAGGTGCGTCTCA
AATTCGATACCAAGGAAGAGGCACTGGAATACGCCGATGACCACGGCATCGAAGTTGAAGTACACGAGCCCAAGACCCGC
AAGCCTAATCTGCGGGCAGGTGGTTACGGAGAAAACTTCGCCACCAATAGACGCGGCCCTTGGACGCACTAA

Upstream 100 bases:

>100_bases
CCGACATACAACCTCTGTTAAATGAGCGATATTTGCGACCTTGCCGCGCCCCATCATCCGTCGCATATAGATGCAAAGGA
ATCTTCTTGAGGAGACAGCC

Downstream 100 bases:

>100_bases
GTCCCTCAAAGACAGAGCACGCTCCTTCTTGAGGTGCCGTCAGATCCAAACAACAAAGCGCCCCACGGGCGCTTTTTCCA
TATCTGGAGGTGGGGTCCGC

Product: ETC complex I subunit region

Products: NA

Alternate protein names: ETC Complex I Subunit Conserved Region; NADH-Ubiquinone Oxidoreductase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase-Related Protein; NADH-Ubiquinone Oxidoreductase Subunit; NADH Dehydrogenase; ETC Complex I Subunit Conserved Region Superfamily; Oxidoreductase Protein; NDUFA4 Family NADH Ubiquinone Oxidoreductase Subunit; NADH-Ubiquinone Oxidoreductase Family Protein; NADHUbiquinone Oxidoreductase; ETC Complex I Subunit Region Protein; NADH Dehydrogenase Iron-Sulfur ; ETC Complex Subunit I Conserved Region Protein; NADH Dehydrogenase Fe-S; ETC Complex I Subunit Protein; Etc Complex I Subunit Conserved Region; NADH-Quinone Oxidoreductase; NADH-Ubiquinone Oxidoreductase Protein; NADH Dehydrogenase Subunit

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTR
KPNLRAGGYGENFATNRRGPWTH

Sequences:

>Translated_103_residues
MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTR
KPNLRAGGYGENFATNRRGPWTH
>Mature_103_residues
MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEEALEYADDHGIEVEVHEPKTR
KPNLRAGGYGENFATNRRGPWTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4505369, Length=99, Percent_Identity=42.4242424242424, Blast_Score=80, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI115533653, Length=100, Percent_Identity=41, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11808; Mature: 11808

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCHHH
ALEYADDHGIEVEVHEPKTRKPNLRAGGYGENFATNRRGPWTH
HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRARIYRPARNAMTSGMAKTRKWVLEYAPADAREVDPLMGWTSSSDTQSQVRLKFDTKEE
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCCEEEEEECCHHH
ALEYADDHGIEVEVHEPKTRKPNLRAGGYGENFATNRRGPWTH
HHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA