| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is futA1 [H]
Identifier: 99079965
GI number: 99079965
Start: 131939
End: 132949
Strand: Reverse
Name: futA1 [H]
Synonym: TM1040_0124
Alternate gene names: 99079965
Gene position: 132949-131939 (Counterclockwise)
Preceding gene: 99079966
Following gene: 99079964
Centisome position: 4.15
GC content: 58.85
Gene sequence:
>1011_bases ATGAAAATCAAAGTCTTCACTACCGTAATCGCCGCGAGCCTTGCTACGACCGCCGTTGCTGACGGGGTTGTGAACCTGTA CTCGTCCCGCCATTACGACACCGACGAACGCCTCTACACCGACTTTGAAGAGGCTACCGGTATCACCATCAACCGCATCG AAGGCAAAGCCGATGAGCTGGTCGCGCGCATGCAGGCCGAAGGGGCCAACTCTCCTGCGGATGTTCTGATCACCGTCGAC ACCTCCCGCCTTGAGCGCGCGAAGAACGCCGGTGTGCTTCAGTCCATCGACAGCGACATTCTTGAAGAGCGCATCCCCGC CAACCTGCAAGATAGCGACAACCAGTGGTTTGGTTTCTCTCAGCGTGCCCGCATCGTCTTCTATGACAAGACTGACGTGG CCAACCCGCCCGCAGACTACATGGATCTTGCCAAGCCCGAATACAAAGGCATGGTCTGCCACCGATCGTCTTCCAATGTC TACTCCCAGACCCTGCTGTCGGCCATCATCGAGAACCACGGTGAAGAGGCGGCACGCGATTGGGCAGAAGGCATCGTCGC AAACTTTGCCCGCGATCCGCAGGGTGGCGATACCGACCAGCTACGCGGCCTGATCTCCGGCGAGTGCGACGTGTCGATTG CAAACACCTATTATTTTGCCCGTGCCCTGCGCAAAGACGTCAAAGGCCTCTCGGCTGAGATCGAGAAGATCGGCGTCGCC TTCCCGGCTCAGGACGCTGAAGGCGCCCACATGAACCTCTCCGGCGCCGGTGTTGCAGCACATGCACCGAACCGTGAGAA CGCCATCAAATTCCTCGAGTACCTGGCTTCCGATCAGGCGCAGGAATATTTCTCCGGCGGCAACGATGAATTCCCGGCGG TCCCGGGCGTCAGCAAGTCGGAAAGCGTTGCACAGCTCGGCGAGTTCAAGGCCGACGACGTGGACCTCTCCAAGGTCGCC AAGAACGTGCCGACCGCACAGAAGATCTTTAACGAGGTTGGCTGGGAATAA
Upstream 100 bases:
>100_bases TTTTCTTTCGCGCCCAATATAGTAATTGACTAAACAACTTGGGAATTGGCCGAGCGAGCGTCACCCAGGGACTAGCGACA TTCACGAGGATGGAAATCGA
Downstream 100 bases:
>100_bases TCGTTCCCCACGTTATGTCAAAGGGCGCGGCAATTGCTGCGCCCTTTTTCGTTTCCGCTCGCAACAACACAAACGACCGT CGCAACGGTCGCGAATCGCC
Product: extracellular solute-binding protein
Products: ADP; phosphate; thiamine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 336
Protein sequence:
>336_residues MKIKVFTTVIAASLATTAVADGVVNLYSSRHYDTDERLYTDFEEATGITINRIEGKADELVARMQAEGANSPADVLITVD TSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQWFGFSQRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHRSSSNV YSQTLLSAIIENHGEEAARDWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSAEIEKIGVA FPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGNDEFPAVPGVSKSESVAQLGEFKADDVDLSKVA KNVPTAQKIFNEVGWE
Sequences:
>Translated_336_residues MKIKVFTTVIAASLATTAVADGVVNLYSSRHYDTDERLYTDFEEATGITINRIEGKADELVARMQAEGANSPADVLITVD TSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQWFGFSQRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHRSSSNV YSQTLLSAIIENHGEEAARDWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSAEIEKIGVA FPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGNDEFPAVPGVSKSESVAQLGEFKADDVDLSKVA KNVPTAQKIFNEVGWE >Mature_336_residues MKIKVFTTVIAASLATTAVADGVVNLYSSRHYDTDERLYTDFEEATGITINRIEGKADELVARMQAEGANSPADVLITVD TSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQWFGFSQRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHRSSSNV YSQTLLSAIIENHGEEAARDWAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSAEIEKIGVA FPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGNDEFPAVPGVSKSESVAQLGEFKADDVDLSKVA KNVPTAQKIFNEVGWE
Specific function: A major iron-binding protein involved in Fe(3+) uptake, probably part of a periplasmic ABC transporter complex futA1A2BC (TC 3.A.1.10.2) involved in Fe(3+) ion import (ferric iron). This protein and futA2 (slr0531) may be subunit proteins that have redund
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cellular thylakoid membrane; Lipid-anchor (Potential). Cell membrane; Lipid-anchor (Potential). Note=Localization to the periplasm was not detected in PubMed:12368463 [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36572; Mature: 36572
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKVFTTVIAASLATTAVADGVVNLYSSRHYDTDERLYTDFEEATGITINRIEGKADEL CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHH VARMQAEGANSPADVLITVDTSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQWFGFS HHHHHHCCCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCC QRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHRSSSNVYSQTLLSAIIENHGEEAARD CCCEEEEEECCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHH WAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSAEIEKIGVA HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC FPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGNDEFPAVPGVSKS CCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ESVAQLGEFKADDVDLSKVAKNVPTAQKIFNEVGWE HHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHCCC >Mature Secondary Structure MKIKVFTTVIAASLATTAVADGVVNLYSSRHYDTDERLYTDFEEATGITINRIEGKADEL CEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHH VARMQAEGANSPADVLITVDTSRLERAKNAGVLQSIDSDILEERIPANLQDSDNQWFGFS HHHHHHCCCCCCCCEEEEECHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCEECCC QRARIVFYDKTDVANPPADYMDLAKPEYKGMVCHRSSSNVYSQTLLSAIIENHGEEAARD CCCEEEEEECCCCCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHCCCHHHHHH WAEGIVANFARDPQGGDTDQLRGLISGECDVSIANTYYFARALRKDVKGLSAEIEKIGVA HHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCC FPAQDAEGAHMNLSGAGVAAHAPNRENAIKFLEYLASDQAQEYFSGGNDEFPAVPGVSKS CCCCCCCCCEEECCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC ESVAQLGEFKADDVDLSKVAKNVPTAQKIFNEVGWE HHHHHHHCCCCCCCCHHHHHHCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; thiamine [Periplasm]; H2O [C]
Specific reaction: ATP + thiamine [Periplasm] + H2O = ADP + phosphate + thiamine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]