| Definition | Ruegeria sp. TM1040, complete genome. |
|---|---|
| Accession | NC_008044 |
| Length | 3,200,938 |
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The map label for this gene is 99079920
Identifier: 99079920
GI number: 99079920
Start: 83364
End: 83552
Strand: Reverse
Name: 99079920
Synonym: TM1040_0079
Alternate gene names: NA
Gene position: 83552-83364 (Counterclockwise)
Preceding gene: 99079921
Following gene: 99079919
Centisome position: 2.61
GC content: 73.02
Gene sequence:
>189_bases ATGGCCGCTTATGATCGCCTGCCCGCCCCCCTGCGGGCCTGGCTGCGCGAGGCGGCTTTGCCGTGGTCGGCGCAGTCCTG TCGCCGGATCTGGCAGGCCGCCACCCGCGAAGGGCTCAGCCCCGAAGCGGCACTGGCGCGGCTGGATGCCGCCGAGCGCA AAACACTCGAACGGGGCGTGCGCAGCTGA
Upstream 100 bases:
>100_bases GGCGGCGGGCCGATCAGGCAGCATGATCATGAGACGGCAACAGAGAAACGCCAACCGGGGCGCGGTCGCTTTGCCGACCC GCACCCGACGCGAGGATCCG
Downstream 100 bases:
>100_bases CCGATTGCTGCGCGGCGTCAGCGAACACTTTCTTTCTGCGCGAAACTGCTGTATGGGCGGAAGTATCTGAGACGATGTGC CCAGACCCCGGCACGCGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 62; Mature: 61
Protein sequence:
>62_residues MAAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGVRS
Sequences:
>Translated_62_residues MAAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGVRS >Mature_61_residues AAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGVRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6962; Mature: 6831
Theoretical pI: Translated: 11.13; Mature: 11.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGV CCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC RS CC >Mature Secondary Structure AAYDRLPAPLRAWLREAALPWSAQSCRRIWQAATREGLSPEAALARLDAAERKTLERGV CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC RS CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA