Click here to switch to the map view.

The map label for this gene is 99079890

Identifier: 99079890

GI number: 99079890

Start: 52205

End: 52660

Strand: Reverse

Name: 99079890

Synonym: TM1040_0049

Alternate gene names: NA

Gene position: 52660-52205 (Counterclockwise)

Preceding gene: 99079891

Following gene: 99079887

Centisome position: 1.65

GC content: 63.6

Gene sequence:

>456_bases
ATGGGTCGGCTTCTGCCCTGTACGATCGGCAAGGGCGGACTTTCGACGGCGAAACGCGAAGGGGACGGGGCAACACCTGT
GGGGACGCATCACATCAGCGGCATGCTCTATCGTCCCGACCGGATCTCGGCGCCCCAAGATTGGGCGCGCCCGATTTTGC
CCGGGGATCTATGGTCGGATGACACGCAGGCGCGCGACTACAACCAGATGGTGCGCGCGCCCTACCCCTTCAGCCACGAG
CGCCTGCGCCGGGCAGATCCACTTTATGATCTGGTGCTGCTCACGGATTGGAACTGGCCAAATGCGACCTCCGGGCGGGG
CTCGGCGATCTTTTTGCACCAGTGGCGCAGACCCGGCTACCCTACCGAGGGGTGCATTGCCTTTTCCCGTCAGAATCTGC
GCTGGATCGCTGAACGCCTGCGCCCCGGTGCCCAATTGATAGTTGGCTCACGCTGA

Upstream 100 bases:

>100_bases
ACGCGTTTAACCGTCACTATCTCGCGACCAAGGCTGCAAAATCAGGCCACATGCTATGAGCCCCGCAGACCTAGTTCTGA
CACCGAAGGGCCTGCGATTC

Downstream 100 bases:

>100_bases
ATAGGCACGCGCCCCGAAGATCGCGGAGCCAACACGCACATGGGTCGCCCCCAGCGCGATGGCGCTCTCGAAGTCTCCGC
TCATCCCCATGGAAAGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MGRLLPCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPDRISAPQDWARPILPGDLWSDDTQARDYNQMVRAPYPFSHE
RLRRADPLYDLVLLTDWNWPNATSGRGSAIFLHQWRRPGYPTEGCIAFSRQNLRWIAERLRPGAQLIVGSR

Sequences:

>Translated_151_residues
MGRLLPCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPDRISAPQDWARPILPGDLWSDDTQARDYNQMVRAPYPFSHE
RLRRADPLYDLVLLTDWNWPNATSGRGSAIFLHQWRRPGYPTEGCIAFSRQNLRWIAERLRPGAQLIVGSR
>Mature_150_residues
GRLLPCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPDRISAPQDWARPILPGDLWSDDTQARDYNQMVRAPYPFSHER
LRRADPLYDLVLLTDWNWPNATSGRGSAIFLHQWRRPGYPTEGCIAFSRQNLRWIAERLRPGAQLIVGSR

Specific function: Unknown

COG id: COG3786

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17065; Mature: 16933

Theoretical pI: Translated: 10.15; Mature: 10.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRLLPCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPDRISAPQDWARPILPGDLWSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCCCCCCHHHCCCCCCCCCCCC
DTQARDYNQMVRAPYPFSHERLRRADPLYDLVLLTDWNWPNATSGRGSAIFLHQWRRPGY
CCCHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
PTEGCIAFSRQNLRWIAERLRPGAQLIVGSR
CCCCEEEECHHHHHHHHHHCCCCCEEEECCC
>Mature Secondary Structure 
GRLLPCTIGKGGLSTAKREGDGATPVGTHHISGMLYRPDRISAPQDWARPILPGDLWSD
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCEEECCCCCCCCHHHCCCCCCCCCCCC
DTQARDYNQMVRAPYPFSHERLRRADPLYDLVLLTDWNWPNATSGRGSAIFLHQWRRPGY
CCCHHHHHHHHCCCCCCCHHHHHHCCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCC
PTEGCIAFSRQNLRWIAERLRPGAQLIVGSR
CCCCEEEECHHHHHHHHHHCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA