| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
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The map label for this gene is tauD [H]
Identifier: 104779497
GI number: 104779497
Start: 220220
End: 221053
Strand: Reverse
Name: tauD [H]
Synonym: PSEEN0210
Alternate gene names: 104779497
Gene position: 221053-220220 (Counterclockwise)
Preceding gene: 104779498
Following gene: 104779494
Centisome position: 3.75
GC content: 65.83
Gene sequence:
>834_bases ATGAGCCTGACCGTAACCCCTCTCAGCCCGGCCCTCGGCGCGCAGATCAGCGGCGTGGACATCAGCCGCGAGATCACCGT CGAACAGCGCGACGCCATCGAACAGGCGCTGCTCCAGCATCAGGTGCTGTTCTTCCGCGACCAGCCGATCACCCCCGAGC AACAGGCGCGTTTCGCCGCACGCTTCGGTGACCTGCACATCCACCCGATCTACCCCAACGTGCCGGAAACGCCGCAGGTG CTGATCCTCGACACGGCGGTCACCGACGTGCGCGACAACGCCGTGTGGCACACCGACGTGACCTTTCTGCCGACGCCCGC GTTGGGCGCGGTGCTCAGTGCCAAACAGTTGCCGGCCTATGGTGGCGATACTTTGTGGGCCAGCGGCATCGCCGCCTTCG AAGCACTGTCGGCGCCGCTGCGCGAGATGCTCGATGGGCTGACCGCCACCCACGACTTCACCAAATCCTTCCCACTGGAG CGCTTCGGCACAACGCCTGAAGACCTGGCGCGCTGGGAAGCCACCCGGCGCAACAACCCGCCGCTGTCGCACCCGGTGGT GCGCACTCATCCGGTCAGCGGGCGCAAGGCGTTGTTCGTCAATGAAGGGTTCACCACGCGTATCAACGAGCTGAACGAGC AGGAGAGCGAGGCGTTGCTCAAGCTGCTGTTCGCCCATGCGACGCGGCCGGAGTTCAGCATTCGCTGGCGTTGGCAGGAG AACGACGTGGCGTTCTGGGACAACCGCGTGACGCAGCATTTCGCGGTGGATGACTACCGGCCGAGCCGGCGGGTGATGCA TCGGGCGACCATCCTGGGGGATGCGCCGTTCTGA
Upstream 100 bases:
>100_bases CCTGCGCGCCCTGCAACGCAAGCTGGTGCCCTGGCACGGGCAGAGCCATTGATAGCCGAATGACCACGCCGGCAACCCGG CACCTGGAACGAGAAATGAC
Downstream 100 bases:
>100_bases CCGACCGTGGGGTGCGTTCGCCGGCAAGCCGGCTCCTACGAGACCTGTAGGAGCCGGCTTGCCGGCGAACGGCCGATCTA GCGAACCAGATGCAGGTACT
Product: taurine dioxygenase
Products: NA
Alternate protein names: 2-aminoethanesulfonate dioxygenase; Sulfate starvation-induced protein 3; SSI3 [H]
Number of amino acids: Translated: 277; Mature: 276
Protein sequence:
>277_residues MSLTVTPLSPALGAQISGVDISREITVEQRDAIEQALLQHQVLFFRDQPITPEQQARFAARFGDLHIHPIYPNVPETPQV LILDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLE RFGTTPEDLARWEATRRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINELNEQESEALLKLLFAHATRPEFSIRWRWQE NDVAFWDNRVTQHFAVDDYRPSRRVMHRATILGDAPF
Sequences:
>Translated_277_residues MSLTVTPLSPALGAQISGVDISREITVEQRDAIEQALLQHQVLFFRDQPITPEQQARFAARFGDLHIHPIYPNVPETPQV LILDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLE RFGTTPEDLARWEATRRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINELNEQESEALLKLLFAHATRPEFSIRWRWQE NDVAFWDNRVTQHFAVDDYRPSRRVMHRATILGDAPF >Mature_276_residues SLTVTPLSPALGAQISGVDISREITVEQRDAIEQALLQHQVLFFRDQPITPEQQARFAARFGDLHIHPIYPNVPETPQVL ILDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLER FGTTPEDLARWEATRRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINELNEQESEALLKLLFAHATRPEFSIRWRWQEN DVAFWDNRVTQHFAVDDYRPSRRVMHRATILGDAPF
Specific function: Catalyzes the conversion of taurine and alpha ketoglutarate to sulfite, aminoacetaldehyde and succinate. Required for the utilization of taurine (2-aminoethanesulfonic acid) as an alternative sulfur source. Pentane-sulfonic acid, 3- (N-morpholino)propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=275, Percent_Identity=60.7272727272727, Blast_Score=360, Evalue=1e-101, Organism=Saccharomyces cerevisiae, GI6322971, Length=289, Percent_Identity=31.1418685121107, Blast_Score=132, Evalue=9e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: =1.14.11.17 [H]
Molecular weight: Translated: 31191; Mature: 31059
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: PS50839 CHASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLTVTPLSPALGAQISGVDISREITVEQRDAIEQALLQHQVLFFRDQPITPEQQARFAA CEEEECCCCHHHCCEECCCCCCEEECHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHH RFGDLHIHPIYPNVPETPQVLILDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAY HHCCEEEEECCCCCCCCCCEEEEECCHHHHCCCCEEEECCEEECCCHHHHHHHHHHCCCC GGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLERFGTTPEDLARWEATRRNNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCC PLSHPVVRTHPVSGRKALFVNEGFTTRINELNEQESEALLKLLFAHATRPEFSIRWRWQE CCCCCCEEECCCCCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEEEC NDVAFWDNRVTQHFAVDDYRPSRRVMHRATILGDAPF CCEEEECCCCHHEEECCCCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure SLTVTPLSPALGAQISGVDISREITVEQRDAIEQALLQHQVLFFRDQPITPEQQARFAA EEEECCCCHHHCCEECCCCCCEEECHHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHH RFGDLHIHPIYPNVPETPQVLILDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAY HHCCEEEEECCCCCCCCCCEEEEECCHHHHCCCCEEEECCEEECCCHHHHHHHHHHCCCC GGDTLWASGIAAFEALSAPLREMLDGLTATHDFTKSFPLERFGTTPEDLARWEATRRNNP CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHCCCC PLSHPVVRTHPVSGRKALFVNEGFTTRINELNEQESEALLKLLFAHATRPEFSIRWRWQE CCCCCCEEECCCCCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCCEEEEEEEEC NDVAFWDNRVTQHFAVDDYRPSRRVMHRATILGDAPF CCEEEECCCCHHEEECCCCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503; 2656410; 8774726; 7984428; 9287300; 11955067 [H]