| Definition | Pseudomonas entomophila L48 chromosome, complete genome. |
|---|---|
| Accession | NC_008027 |
| Length | 5,888,780 |
Click here to switch to the map view.
The map label for this gene is tauC [H]
Identifier: 104779498
GI number: 104779498
Start: 221102
End: 221941
Strand: Reverse
Name: tauC [H]
Synonym: PSEEN0211
Alternate gene names: 104779498
Gene position: 221941-221102 (Counterclockwise)
Preceding gene: 104779499
Following gene: 104779497
Centisome position: 3.77
GC content: 69.29
Gene sequence:
>840_bases ATGAGCAGCATCGAATTGCCGGCCGCCGCCAAGCAGGCACAACGGACGCAACCTGCAGTGAAACCCCGCAAACCCTTGCC GACCCGCTGGATCAGCACCCTGACCCTCGCCACCCTGCTGCTGGCCTGGTGGCTGGTGACAGCCGCCGGCTGGATCGAAC CACTGTTCCTGCCGCCGCCCGGCGACATCCTGGCCAAGGGCTGGACCCTGCTCACCCAAGGCTACATGGACGCCAGCCTG TGGCAGCACCTGGGCGCCAGCCTCGGCCGCATCGGCCTGGCCCTGCTGGCCGCGACGCTCACCGCCATCCCGGTAGGCCT GGCCATCGGCTACAACCGCGTCGCCCGCGGCATCCTCGACCCGCTGATCGAGTTCTACCGGCCGATCCCGCCGCTGGCCT ACCTGCCGCTGATCGTGATCTGGTGCGGCATCGGCGAGCTGTCGAAAGTGCTGCTGATCTACCTGGCGATCTTCGCCCCG ATCGCCATCGCCACCGCCACCGGCGTGCGCACCGTCGACCCGGCCAAGTTGCGCGCCGCCCAGTCGCTGGGCGCCACCCA GGCCCAGCTGATTCGCCACGTGATCCTGCCCAGCGCCCTGCCCGACATCCTCACCGGCATCCGCATCGGGCTGGGCGTGG GCTGGTCGACCCTGGTCGCCGCCGAACTGATCGCCGCCACCAGCGGCCTGGGCTTCATGGTGCAGTCGGCGGCGCAGTTC CTGGTCACCGATGTGGTGGTGCTGGGGATCCTGCTGATCGCGCTTATCGCCTTTGCCCTGGAGATGGGCCTGCGCGCCCT GCAACGCAAGCTGGTGCCCTGGCACGGGCAGAGCCATTGA
Upstream 100 bases:
>100_bases CGGCTGGCGAGTCGGCCCGAGCGATCAAGTCCGATCCCCGCTTCATCGAAACCCGCGAGCACGTGCTGGCACGGGTATTC TCGCAACGCCAGGAGTCCGC
Downstream 100 bases:
>100_bases TAGCCGAATGACCACGCCGGCAACCCGGCACCTGGAACGAGAAATGACATGAGCCTGACCGTAACCCCTCTCAGCCCGGC CCTCGGCGCGCAGATCAGCG
Product: taurine ABC transporter permease
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSSIELPAAAKQAQRTQPAVKPRKPLPTRWISTLTLATLLLAWWLVTAAGWIEPLFLPPPGDILAKGWTLLTQGYMDASL WQHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVLLIYLAIFAP IAIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQF LVTDVVVLGILLIALIAFALEMGLRALQRKLVPWHGQSH
Sequences:
>Translated_279_residues MSSIELPAAAKQAQRTQPAVKPRKPLPTRWISTLTLATLLLAWWLVTAAGWIEPLFLPPPGDILAKGWTLLTQGYMDASL WQHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVLLIYLAIFAP IAIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQF LVTDVVVLGILLIALIAFALEMGLRALQRKLVPWHGQSH >Mature_278_residues SSIELPAAAKQAQRTQPAVKPRKPLPTRWISTLTLATLLLAWWLVTAAGWIEPLFLPPPGDILAKGWTLLTQGYMDASLW QHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILDPLIEFYRPIPPLAYLPLIVIWCGIGELSKVLLIYLAIFAPI AIATATGVRTVDPAKLRAAQSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQFL VTDVVVLGILLIALIAFALEMGLRALQRKLVPWHGQSH
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=244, Percent_Identity=67.6229508196721, Blast_Score=303, Evalue=1e-83, Organism=Escherichia coli, GI87081802, Length=237, Percent_Identity=37.1308016877637, Blast_Score=147, Evalue=8e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29749; Mature: 29618
Theoretical pI: Translated: 10.50; Mature: 10.50
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIELPAAAKQAQRTQPAVKPRKPLPTRWISTLTLATLLLAWWLVTAAGWIEPLFLPPP CCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDILAKGWTLLTQGYMDASLWQHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIEFYRPIPPLAYLPLIVIWCGIGELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAA HHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH QSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQF HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHH LVTDVVVLGILLIALIAFALEMGLRALQRKLVPWHGQSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SSIELPAAAKQAQRTQPAVKPRKPLPTRWISTLTLATLLLAWWLVTAAGWIEPLFLPPP CCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDILAKGWTLLTQGYMDASLWQHLGASLGRIGLALLAATLTAIPVGLAIGYNRVARGILD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLIEFYRPIPPLAYLPLIVIWCGIGELSKVLLIYLAIFAPIAIATATGVRTVDPAKLRAA HHHHHHCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHH QSLGATQAQLIRHVILPSALPDILTGIRIGLGVGWSTLVAAELIAATSGLGFMVQSAAQF HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHH LVTDVVVLGILLIALIAFALEMGLRALQRKLVPWHGQSH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]