Click here to switch to the map view.

The map label for this gene is ssuC [H]

Identifier: 104779474

GI number: 104779474

Start: 188250

End: 189833

Strand: Reverse

Name: ssuC [H]

Synonym: PSEEN0181

Alternate gene names: 104779474

Gene position: 189833-188250 (Counterclockwise)

Preceding gene: 104779477

Following gene: 104779473

Centisome position: 3.22

GC content: 68.75

Gene sequence:

>1584_bases
ATGAGCGAAGTCTTGAGCGTAGGCCAGCGCCGTCGATTGGGGCCGCTACGCAGCCCTTTCGCGGCACAAGGCCGCTCCTA
CGTACCGTGGATTGTGCCGTTGGCGGTGGTGGCACTGTGGATCATCGCCAGCCATGAGCACTGGATGAGCGAGCAGATCC
TGCCCGCACCGTCACTGGTCTGGCAGAGCGCCCTGGAATTCGGCTCCGGGGAGCTCTGGGGCCACCTGTGGATAAGTGTG
CGAAGGCTGACCTGGGGGCTGCTGGCGGGAATCGGCGGCGGGTTGCTGCTGGGGACCTGGCTGGGTGCGTCGCACAGAGC
GCGGACGCTGGTGCTGCCGACCTTCATCGCCCTGGCGCAGATCCCGACCCTGGCCTGGATCCCGCTGTTCATGCTGTTCT
TCGGCATCGGCGAGTGGCTCAAGCTGGTGGTGCTGGTCAAGGCCGTGGTGGTGCCGGTCACCCTGCACACCCTGGTCGGC
GTGCGCGACGCCCAGCCCAAGCTGCGCGAAGCCGCCGCCACCCTGCGCCTGCCCGTCCACCTGGTGTTCCTGCGCCTGCT
GCTGCCGGCCGCCCTGCCGGCATTCCTCGCAGGGGTTCGCCTGGCCCTGGCGACCGGCTGGACTTCCTTGCTGGCAGTAG
AGCTGCTGGCCTCCAGCGAAGGCATCGGCTACCTGATGGTCTGGGGCCGACAGTTGTTCATGCTCGACCTGGTGTTCCTC
TGCATCCTGGTGGTCGGCCTGGTCGGCGCGTTGATGGATCGCGGTTTCTCGCGGCTTGAACACAGCCTGCTGTTCTGGCC
ACAACCGGCCACGGGTGAGCAGGCGCGTGGCACCGTCACGAACAACTGGCAGAGCCTGCTGCTGCCTGCGGCGGTGCTGG
TGGTGTGGCAGGCGGCCAACAGCTTCGGTTGGGTCGATGCGAACATCCTCAGCTCACCGCTGGACGTGCTGCGCAGCCTG
TACACCGGGCTGCTGGACGGGTCGCTGCCCGAGGCCTTGCGCCTGAGCCTGCAGCGCACCCTGGCCGGATTGCTGCTCGG
CGGCGGCGCAGGGTTTGTCCTGGGTTTGCTGCTGGGCCTGTCGCACAGCAGCGAACGCCTGCTCGGCCCCAGCCTGTCGG
CGTTGCGCCAGGTGGCGCTGTTTGCCTGGGTACCATTGCTCACCGCCTGGTTCGGCCTGGGCGAAGGCGCCAAGCTGGTG
TTCGTCGGGCTGGCGGCGTTCTTCCCACTGCTGATCGCCACCCAGCGCGGCATCGCCAGCCTCTCGCCGCAACTCGGCGA
GGCGGCGCAGGCCCTGCGCCTGGGCCTGCCCCACCGCCTGCGCCTGCTGGTGCTGCCCGGCGCCGCCCCGGCCATCTTCG
CCGGCCTGCGCCTGGCGCTGATCTATGCCTGGCTCGGCACCATCGGCGCCGAATATTTCATGCCCTCGGACGGCGGCATC
GCCAGCCTGATGATCGGCGCCCAGCAGTTGTTCCGCATGGACCAGGTGATGGCTGCCATGGTCCTGATCGGCCTGGTCGG
CGCCCTGCTCGGCCACCTCGGCCAACGCCTCGAATCGCGCGCCACGCGCTGGAGATCCGCATGA

Upstream 100 bases:

>100_bases
TCGCATGCAACGGGCGCATGCTCTTATCTCTTGAATATCGTTTGTAAGAATTTTTAATTCCATAAGCGAATAAACAAGGA
TTGGTTTGAGAGGTGCCTTG

Downstream 100 bases:

>100_bases
ATGCCTTCATAGCCCCGGCCCTGCACGCGGCCAACCAACCCGACGCAACACCGCCCCTGGTCAGCTTCGAAGGGGTCGGC
AAGACCTTCAGCGTCGACGG

Product: alkyl sulfate ester ABC transporter permease AstB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 527; Mature: 526

Protein sequence:

>527_residues
MSEVLSVGQRRRLGPLRSPFAAQGRSYVPWIVPLAVVALWIIASHEHWMSEQILPAPSLVWQSALEFGSGELWGHLWISV
RRLTWGLLAGIGGGLLLGTWLGASHRARTLVLPTFIALAQIPTLAWIPLFMLFFGIGEWLKLVVLVKAVVVPVTLHTLVG
VRDAQPKLREAAATLRLPVHLVFLRLLLPAALPAFLAGVRLALATGWTSLLAVELLASSEGIGYLMVWGRQLFMLDLVFL
CILVVGLVGALMDRGFSRLEHSLLFWPQPATGEQARGTVTNNWQSLLLPAAVLVVWQAANSFGWVDANILSSPLDVLRSL
YTGLLDGSLPEALRLSLQRTLAGLLLGGGAGFVLGLLLGLSHSSERLLGPSLSALRQVALFAWVPLLTAWFGLGEGAKLV
FVGLAAFFPLLIATQRGIASLSPQLGEAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSDGGI
ASLMIGAQQLFRMDQVMAAMVLIGLVGALLGHLGQRLESRATRWRSA

Sequences:

>Translated_527_residues
MSEVLSVGQRRRLGPLRSPFAAQGRSYVPWIVPLAVVALWIIASHEHWMSEQILPAPSLVWQSALEFGSGELWGHLWISV
RRLTWGLLAGIGGGLLLGTWLGASHRARTLVLPTFIALAQIPTLAWIPLFMLFFGIGEWLKLVVLVKAVVVPVTLHTLVG
VRDAQPKLREAAATLRLPVHLVFLRLLLPAALPAFLAGVRLALATGWTSLLAVELLASSEGIGYLMVWGRQLFMLDLVFL
CILVVGLVGALMDRGFSRLEHSLLFWPQPATGEQARGTVTNNWQSLLLPAAVLVVWQAANSFGWVDANILSSPLDVLRSL
YTGLLDGSLPEALRLSLQRTLAGLLLGGGAGFVLGLLLGLSHSSERLLGPSLSALRQVALFAWVPLLTAWFGLGEGAKLV
FVGLAAFFPLLIATQRGIASLSPQLGEAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSDGGI
ASLMIGAQQLFRMDQVMAAMVLIGLVGALLGHLGQRLESRATRWRSA
>Mature_526_residues
SEVLSVGQRRRLGPLRSPFAAQGRSYVPWIVPLAVVALWIIASHEHWMSEQILPAPSLVWQSALEFGSGELWGHLWISVR
RLTWGLLAGIGGGLLLGTWLGASHRARTLVLPTFIALAQIPTLAWIPLFMLFFGIGEWLKLVVLVKAVVVPVTLHTLVGV
RDAQPKLREAAATLRLPVHLVFLRLLLPAALPAFLAGVRLALATGWTSLLAVELLASSEGIGYLMVWGRQLFMLDLVFLC
ILVVGLVGALMDRGFSRLEHSLLFWPQPATGEQARGTVTNNWQSLLLPAAVLVVWQAANSFGWVDANILSSPLDVLRSLY
TGLLDGSLPEALRLSLQRTLAGLLLGGGAGFVLGLLLGLSHSSERLLGPSLSALRQVALFAWVPLLTAWFGLGEGAKLVF
VGLAAFFPLLIATQRGIASLSPQLGEAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSDGGIA
SLMIGAQQLFRMDQVMAAMVLIGLVGALLGHLGQRLESRATRWRSA

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=242, Percent_Identity=38.8429752066116, Blast_Score=121, Evalue=1e-28,
Organism=Escherichia coli, GI1786564, Length=233, Percent_Identity=30.9012875536481, Blast_Score=99, Evalue=7e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 56736; Mature: 56605

Theoretical pI: Translated: 11.35; Mature: 11.35

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVLSVGQRRRLGPLRSPFAAQGRSYVPWIVPLAVVALWIIASHEHWMSEQILPAPSLV
CCHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHH
WQSALEFGSGELWGHLWISVRRLTWGLLAGIGGGLLLGTWLGASHRARTLVLPTFIALAQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
IPTLAWIPLFMLFFGIGEWLKLVVLVKAVVVPVTLHTLVGVRDAQPKLREAAATLRLPVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LVFLRLLLPAALPAFLAGVRLALATGWTSLLAVELLASSEGIGYLMVWGRQLFMLDLVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
CILVVGLVGALMDRGFSRLEHSLLFWPQPATGEQARGTVTNNWQSLLLPAAVLVVWQAAN
HHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
SFGWVDANILSSPLDVLRSLYTGLLDGSLPEALRLSLQRTLAGLLLGGGAGFVLGLLLGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
SHSSERLLGPSLSALRQVALFAWVPLLTAWFGLGEGAKLVFVGLAAFFPLLIATQRGIAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LSPQLGEAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSDGGI
CCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCH
ASLMIGAQQLFRMDQVMAAMVLIGLVGALLGHLGQRLESRATRWRSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEVLSVGQRRRLGPLRSPFAAQGRSYVPWIVPLAVVALWIIASHEHWMSEQILPAPSLV
CHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHH
WQSALEFGSGELWGHLWISVRRLTWGLLAGIGGGLLLGTWLGASHRARTLVLPTFIALAQ
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
IPTLAWIPLFMLFFGIGEWLKLVVLVKAVVVPVTLHTLVGVRDAQPKLREAAATLRLPVH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LVFLRLLLPAALPAFLAGVRLALATGWTSLLAVELLASSEGIGYLMVWGRQLFMLDLVFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHH
CILVVGLVGALMDRGFSRLEHSLLFWPQPATGEQARGTVTNNWQSLLLPAAVLVVWQAAN
HHHHHHHHHHHHHHHHHHHHHCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
SFGWVDANILSSPLDVLRSLYTGLLDGSLPEALRLSLQRTLAGLLLGGGAGFVLGLLLGL
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHC
SHSSERLLGPSLSALRQVALFAWVPLLTAWFGLGEGAKLVFVGLAAFFPLLIATQRGIAS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LSPQLGEAAQALRLGLPHRLRLLVLPGAAPAIFAGLRLALIYAWLGTIGAEYFMPSDGGI
CCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCH
ASLMIGAQQLFRMDQVMAAMVLIGLVGALLGHLGQRLESRATRWRSA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8011666; 9782504; 9384377 [H]